Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_P20
         (406 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0D0N3 Cluster: Chromosome undetermined scaffold_33, wh...    31   6.6  
UniRef50_Q4YY97 Cluster: Putative uncharacterized protein; n=6; ...    31   8.7  
UniRef50_Q76IP7 Cluster: YIL017c homolog; n=2; Candida glabrata|...    31   8.7  

>UniRef50_A0D0N3 Cluster: Chromosome undetermined scaffold_33, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_33,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 256

 Score = 31.5 bits (68), Expect = 6.6
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = -3

Query: 380 CSETTSNKLLRNIHDPKVVKPDTKYI 303
           C++ + NKLLRN+ + +++K D +YI
Sbjct: 42  CNDLSLNKLLRNVGEKQILKEDCEYI 67


>UniRef50_Q4YY97 Cluster: Putative uncharacterized protein; n=6;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 636

 Score = 31.1 bits (67), Expect = 8.7
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -2

Query: 198 LKDLLFYVYSDLYEII--LPSKWITNNTIIKKVYLQKINLI*ECVFRSILDYSTIN 37
           + +LLFY Y +LY  I  LP  +      + K Y +KIN +       +LD+S  N
Sbjct: 108 ISNLLFYPYDNLYTAINNLPLFYKIKLINLDKYYFEKINKMKGSSMEKLLDFSQEN 163


>UniRef50_Q76IP7 Cluster: YIL017c homolog; n=2; Candida
           glabrata|Rep: YIL017c homolog - Candida glabrata (Yeast)
           (Torulopsis glabrata)
          Length = 840

 Score = 31.1 bits (67), Expect = 8.7
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -2

Query: 177 VYSDLYEIILPSKWITNNTIIKKVYLQKINL 85
           V S L +I LP  ++TNNT I + Y++ IN+
Sbjct: 84  VVSVLQDIELPKTFLTNNTSINRKYIKLINM 114


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 331,348,408
Number of Sequences: 1657284
Number of extensions: 5817391
Number of successful extensions: 11767
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11767
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17773009086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)