Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_P18
         (462 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           47   4e-07
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   0.98 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    24   3.0  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         23   6.9  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   6.9  
AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...    22   9.1  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    22   9.1  
AF533512-1|AAM97673.1|  200|Anopheles gambiae odorant binding pr...    22   9.1  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 46.8 bits (106), Expect = 4e-07
 Identities = 19/35 (54%), Positives = 26/35 (74%)
 Frame = +2

Query: 38  LPDGWEMRTSRSTGMSYYLNTYTKKSQWERPEAPA 142
           LP GWE R++++ G +YY+N YTK +QW RP  PA
Sbjct: 163 LPRGWEERSAQN-GRTYYVNHYTKTTQWSRPTEPA 196



 Score = 29.5 bits (63), Expect = 0.060
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +2

Query: 14  MSNENDAPLPDGWEMRTSRSTGMSYYLNTYTKKSQWERP 130
           ++ E   PLP GWE R + S G  Y+++   + +Q+  P
Sbjct: 368 LTTETLGPLPHGWEQRKTAS-GRVYFVDHNNRTTQFTDP 405


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 25.4 bits (53), Expect = 0.98
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 6/64 (9%)
 Frame = +2

Query: 107 KKSQWERPEAPAELTEIRCSHILVKHVQSRRPSSWREDNI------TRSKEEALEILKKY 268
           +K QWE    P E    +   I+ +    R P  W E  +        S+EE  E LK+ 
Sbjct: 362 RKQQWEGARVPMERDANKLQFIVNELFLERPPMEWPETEVGGDPQDPVSEEELAEELKEI 421

Query: 269 RKQI 280
            + +
Sbjct: 422 ARSL 425


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +2

Query: 179 KHVQSRRPSSWREDNIT-RSKEEALEILKKYRKQI 280
           K ++  + S  +E NI  + KEEA E+LK+ +K++
Sbjct: 246 KRLKEDQISKQQELNIIEKRKEEADEVLKEKKKEV 280


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 96  THIPKNHSGSDQKHLQSSR 152
           T + KNH GS+ +H +  R
Sbjct: 142 TFLNKNHHGSEMRHEKGRR 160


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 232  QQGGGSGNIKKIPQTNRG 285
            Q GGG  N K+   TN G
Sbjct: 1168 QMGGGGANRKRSSATNNG 1185


>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 7/27 (25%), Positives = 18/27 (66%)
 Frame = +2

Query: 368 GKGQMQKAFEEEAFKLKIGQLSKPIAT 448
           GKG++ + ++E   ++ +GQ +K + +
Sbjct: 52  GKGEVIRGWDEGVAQMSVGQRAKLVCS 78


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 221 NITRSKEEALEILKKYRKQIVANDITFVDI 310
           +I  S     +ILK+  KQ +  ++TF+ +
Sbjct: 562 HIVESDRVGTQILKEMNKQKLPGEVTFMPL 591


>AF533512-1|AAM97673.1|  200|Anopheles gambiae odorant binding
           protein-8 protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 145 AHGDPMQSYPGQTCAKPQAV 204
           A G P+ + P + C KP  V
Sbjct: 34  AAGPPVDTNPAECCPKPMLV 53


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,830
Number of Sequences: 2352
Number of extensions: 10406
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39969834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)