Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_P17
(517 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 161 5e-42
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 161 5e-42
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 94 7e-22
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 27 0.087
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 23 2.5
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 4.3
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 5.7
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 5.7
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 5.7
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 5.7
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 21 7.5
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 21 7.5
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 10.0
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 10.0
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 161 bits (390), Expect = 5e-42
Identities = 74/84 (88%), Positives = 80/84 (95%)
Frame = +2
Query: 11 VLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFP 190
VLDCHTAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P+KP+CVE+FQEFP
Sbjct: 360 VLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFP 419
Query: 191 PLGRFAVRDMRQTVAVGVIKAVNF 262
PLGRFAVRDMRQTVAVGVIK+V F
Sbjct: 420 PLGRFAVRDMRQTVAVGVIKSVTF 443
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 161 bits (390), Expect = 5e-42
Identities = 74/84 (88%), Positives = 79/84 (94%)
Frame = +2
Query: 11 VLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFP 190
VLDCHTAHIACKFA+IKEK DRR GK+TE+NPKSIKSGDAAIV LVPSKP+C E+FQEFP
Sbjct: 360 VLDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMCAEAFQEFP 419
Query: 191 PLGRFAVRDMRQTVAVGVIKAVNF 262
PLGRFAVRDMRQTVAVGVIKAV F
Sbjct: 420 PLGRFAVRDMRQTVAVGVIKAVTF 443
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 94.3 bits (224), Expect = 7e-22
Identities = 43/49 (87%), Positives = 46/49 (93%)
Frame = +2
Query: 11 VLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 157
VLDCHTAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P+K
Sbjct: 71 VLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 27.5 bits (58), Expect = 0.087
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 232 RRRCNKGCELQGSRWWQSHQSCRKSHQGQEVASTVN 339
R RC+ ++ GS+ WQ +SC + E ++V+
Sbjct: 54 RGRCSSYLQVSGSKIWQMERSCMCCQESGEREASVS 89
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 22.6 bits (46), Expect = 2.5
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -1
Query: 256 HSLYYTDGDRLPHVTHGETTEGWEFLEG-LHTQGLGGNQVDNG 131
H LYY D ++ + + E +E + L+TQ G NG
Sbjct: 276 HGLYYVDTEQFSNPQYEENNVQYEGSQDILNTQSFGKVVSKNG 318
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 4.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 66 KSTVVLVNQQRTTLNPLNLVM 128
KST V +R T+NP ++++
Sbjct: 142 KSTTTTVEVKRDTINPEDVIL 162
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.4 bits (43), Expect = 5.7
Identities = 14/61 (22%), Positives = 26/61 (42%)
Frame = +1
Query: 301 KSHQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLFYIFYMAYTVTLFLIYIRLY 480
+ G+E S L +L + GV K R N+F + + M L L + +++
Sbjct: 169 RKENGKEFDCHNYMSELTVDILLETAMGVSKPTRDHNAFEYAMAVMKMCDILHLRHTKIW 228
Query: 481 I 483
+
Sbjct: 229 L 229
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 181 LEGLHTQGLGGNQVDNGGITRFNGFRVV 98
L LHT L N++ G FNG V+
Sbjct: 382 LYNLHTLELSDNKLRTVGAQLFNGLFVL 409
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 5.7
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 322 VASTVNSSVLYTTAILHSPKGVQKERRATNSFLFYI 429
V S + VLYTT + + G K+ SF+ Y+
Sbjct: 167 VISMHDGLVLYTTPSICTALGYLKDAWIGRSFIDYV 202
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 21.4 bits (43), Expect = 5.7
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 322 VASTVNSSVLYTTAILHSPKGVQKERRATNSFLFYI 429
V S + VLYTT + + G K+ SF+ Y+
Sbjct: 162 VISMHDGLVLYTTPSICTALGYLKDAWIGRSFIDYV 197
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +2
Query: 101 NPKSIKSGDAAIVNLVPSKPLC 166
NP+ G +V L PS P C
Sbjct: 66 NPEHKPPGPKDLVYLEPSPPFC 87
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +2
Query: 101 NPKSIKSGDAAIVNLVPSKPLC 166
NP+ G +V L PS P C
Sbjct: 67 NPEHKPPGPKDLVYLEPSPPFC 88
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +3
Query: 66 KSTVVLVNQQRTTLNPLNLVM 128
KST+ V +R +NP ++++
Sbjct: 131 KSTITTVEVKRDIINPEDVIL 151
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +3
Query: 66 KSTVVLVNQQRTTLNPLNLVM 128
KST+ V +R +NP ++++
Sbjct: 142 KSTITTVEVKRDIINPEDVIL 162
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,823
Number of Sequences: 438
Number of extensions: 3416
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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