Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_P16
         (430 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    22   2.2  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    22   2.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   6.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   6.6  

>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 73  YQTQYTHFLK 44
           YQTQY H+L+
Sbjct: 111 YQTQYAHYLE 120


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 73  YQTQYTHFLK 44
           YQTQY H+L+
Sbjct: 111 YQTQYAHYLE 120


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -3

Query: 152 HQRIAPVSLHLHSPPLVQPCKLPPC 78
           H  + P ++H+   P + P   P C
Sbjct: 368 HHDMLPETMHMGMGPSLTPLASPGC 392


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -3

Query: 152 HQRIAPVSLHLHSPPLVQPCKLPPC 78
           H  + P ++H+   P + P   P C
Sbjct: 368 HHDMLPETMHMGMGPSLTPLASPGC 392


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,936
Number of Sequences: 336
Number of extensions: 1404
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)