Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_P13
         (260 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   2.9  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    20   3.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   3.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   3.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    19   6.7  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    19   8.8  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    19   8.8  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    19   8.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    19   8.8  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    19   8.8  

>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 20.6 bits (41), Expect = 2.9
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 4   RGNNEKLQEELDRERAKYSEL 66
           R NNE  +   D  RAK  E+
Sbjct: 143 RKNNEAAKRSRDARRAKEDEI 163


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 31  ELDRERAKYSELLKKH 78
           E  + RAK SELL+ H
Sbjct: 440 EDSQNRAKLSELLRYH 455


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 193 SVRLTSSPVYPWP 155
           S+ LT  P+YP+P
Sbjct: 156 SMGLTRPPMYPFP 168


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 193 SVRLTSSPVYPWP 155
           S+ LT  P+YP+P
Sbjct: 48  SMGLTRPPMYPFP 60


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = -1

Query: 113 ISILPRCSVTCLCF 72
           I ++P C + CL +
Sbjct: 213 IQVVPYCYINCLIY 226


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 8/25 (32%), Positives = 9/25 (36%)
 Frame = +3

Query: 138 SATGRSGQG*TGEEVKRTDGTMQPD 212
           S  G  G     +    TDG   PD
Sbjct: 47  STNGDGGARSNADSTSHTDGASTPD 71


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = -2

Query: 175 SPVYPW 158
           SP+YPW
Sbjct: 230 SPLYPW 235


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 8/25 (32%), Positives = 9/25 (36%)
 Frame = +3

Query: 138 SATGRSGQG*TGEEVKRTDGTMQPD 212
           S  G  G     +    TDG   PD
Sbjct: 203 STNGDGGARSNADSTSHTDGASTPD 227


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = +1

Query: 16  EKLQEELDRERAKYSELLKKHKQVTEHLGSMLIENTNL 129
           EKL E+    R++ +     H   T  +GS +++   +
Sbjct: 733 EKLIEKSFDSRSRQNSSFPGHGPTTAPMGSSILKRLGI 770


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = -2

Query: 175 SPVYPW 158
           SP+YPW
Sbjct: 232 SPLYPW 237


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.303    0.122    0.327 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,426
Number of Sequences: 336
Number of extensions: 834
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4164927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.2 bits)