Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_P13
         (260 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   0.45 
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    23   1.4  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    22   3.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            21   5.6  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    21   5.6  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            21   9.7  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    21   9.7  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +1

Query: 1    ARGNNEKLQEELDRERAKYSELLKKHKQVTE 93
            +R  N+K    L+RE  +Y E++++ K V +
Sbjct: 978  SRNVNQKAMVLLEREEEQYKEVMRRKKVVED 1008


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 49  AKYSELLKKHKQVTEHLGSMLIENTNLC 132
           A+  E LK HKQ+ +++  +    T+LC
Sbjct: 228 AELKECLKYHKQIIQYVHDLNSLVTHLC 255


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -2

Query: 52  WHVPCRVPLVVSR 14
           WHV C VP+   +
Sbjct: 282 WHVQCNVPICAEK 294


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 13   NEKLQEELDRERAKYSELLKKHKQVTE 93
            N + Q + D+E  K +  LK HK+ T+
Sbjct: 3045 NTENQGKQDQEDRKVNPYLKHHKRPTK 3071


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 187 RLTSSPVYPWPLRPVALFHTNWCSRSA 107
           RLT S +Y W ++ V  F     S S+
Sbjct: 136 RLTLSQIYEWMVQNVPYFKDKGDSNSS 162


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 13   NEKLQEELDRERAKYSELLKKHKQVTE 93
            N   Q + D+E  K +  LK HK+ T+
Sbjct: 3042 NTANQGKQDQEDRKVNPYLKHHKRQTK 3068


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 71  RNTNKSPNTS 100
           +NTN SPNT+
Sbjct: 26  QNTNSSPNTA 35


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.303    0.122    0.327 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,849
Number of Sequences: 2352
Number of extensions: 3228
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 13983072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.0 bits)