Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_P13
         (260 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43195-1|AAB02814.1| 1354|Homo sapiens Rho-associated, coiled-co...    33   0.12 
BC113114-1|AAI13115.1| 1354|Homo sapiens Rho-associated, coiled-...    33   0.12 
BC018142-1|AAH18142.1|  740|Homo sapiens CARD14 protein protein.       31   0.67 
AY032927-1|AAK54453.1| 1004|Homo sapiens CARD-containing MAGUK 2...    31   0.67 
AF322642-1|AAG53403.1| 1004|Homo sapiens caspase recruitment dom...    31   0.67 
BC111018-1|AAI11019.1|  658|Homo sapiens translin-associated fac...    30   1.5  
BC068997-1|AAH68997.1|  541|Homo sapiens centrosomal protein 63k...    29   3.6  
BC014050-1|AAH14050.1|  495|Homo sapiens centrosomal protein 63k...    29   3.6  
AK056465-1|BAB71192.1|  703|Homo sapiens protein ( Homo sapiens ...    29   3.6  
AK023448-1|BAB14578.1|  541|Homo sapiens protein ( Homo sapiens ...    29   3.6  
CR456470-1|CAG30356.1|  578|Homo sapiens dJ439F8.1 protein.            28   6.2  
BC129837-1|AAI29838.1|  578|Homo sapiens death-inducing-protein ...    28   6.2  
AL096766-2|CAI18820.1|  578|Homo sapiens protein ( Human DNA seq...    28   6.2  
AL021392-1|CAI20966.1|  578|Homo sapiens protein ( Human DNA seq...    28   6.2  
AB018310-1|BAA34487.2|  598|Homo sapiens KIAA0767 protein protein.     28   6.2  
BC004496-1|AAH04496.1|  209|Homo sapiens Unknown (protein for MG...    27   8.2  
AK023738-1|BAB14662.1|  475|Homo sapiens protein ( Homo sapiens ...    27   8.2  

>U43195-1|AAB02814.1| 1354|Homo sapiens Rho-associated, coiled-coil
            containing protein kinase p160ROCK protein.
          Length = 1354

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 13/35 (37%), Positives = 25/35 (71%)
 Frame = +1

Query: 13   NEKLQEELDRERAKYSELLKKHKQVTEHLGSMLIE 117
            N KLQ EL++ER K+++++ KH++    + + L+E
Sbjct: 1034 NRKLQLELNQEREKFNQMVVKHQKELNDMQAQLVE 1068


>BC113114-1|AAI13115.1| 1354|Homo sapiens Rho-associated, coiled-coil
            containing protein kinase 1 protein.
          Length = 1354

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 13/35 (37%), Positives = 25/35 (71%)
 Frame = +1

Query: 13   NEKLQEELDRERAKYSELLKKHKQVTEHLGSMLIE 117
            N KLQ EL++ER K+++++ KH++    + + L+E
Sbjct: 1034 NRKLQLELNQEREKFNQMVVKHQKELNDMQAQLVE 1068


>BC018142-1|AAH18142.1|  740|Homo sapiens CARD14 protein protein.
          Length = 740

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 13/27 (48%), Positives = 21/27 (77%)
 Frame = +1

Query: 22  LQEELDRERAKYSELLKKHKQVTEHLG 102
           LQEEL++E+ +   LL++ +Q+ EHLG
Sbjct: 135 LQEELNQEKGQKEVLLRRCQQLQEHLG 161


>AY032927-1|AAK54453.1| 1004|Homo sapiens CARD-containing MAGUK 2
           protein protein.
          Length = 1004

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 13/27 (48%), Positives = 21/27 (77%)
 Frame = +1

Query: 22  LQEELDRERAKYSELLKKHKQVTEHLG 102
           LQEEL++E+ +   LL++ +Q+ EHLG
Sbjct: 135 LQEELNQEKGQKEVLLRRCQQLQEHLG 161


>AF322642-1|AAG53403.1| 1004|Homo sapiens caspase recruitment domain
           protein 14 protein.
          Length = 1004

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 13/27 (48%), Positives = 21/27 (77%)
 Frame = +1

Query: 22  LQEELDRERAKYSELLKKHKQVTEHLG 102
           LQEEL++E+ +   LL++ +Q+ EHLG
Sbjct: 135 LQEELNQEKGQKEVLLRRCQQLQEHLG 161


>BC111018-1|AAI11019.1|  658|Homo sapiens translin-associated factor
           X interacting protein 1 protein.
          Length = 658

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +1

Query: 13  NEKLQEELDRERAKYSELLKKHKQVTE-HLGSM 108
           N+ LQE+LD  RA Y E+ K+H+ + + H+ ++
Sbjct: 268 NKDLQEQLDTLRASYEEVRKEHEILMQLHMSTL 300


>BC068997-1|AAH68997.1|  541|Homo sapiens centrosomal protein 63kDa
           protein.
          Length = 541

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/42 (26%), Positives = 25/42 (59%)
 Frame = +1

Query: 4   RGNNEKLQEELDRERAKYSELLKKHKQVTEHLGSMLIENTNL 129
           +G++  +++ L  E  K  +   +HK++ + L S+ +EN +L
Sbjct: 435 KGSSSDMEKRLRAEMQKAEDKAVEHKEILDQLESLKLENRHL 476


>BC014050-1|AAH14050.1|  495|Homo sapiens centrosomal protein 63kDa
           protein.
          Length = 495

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/42 (26%), Positives = 25/42 (59%)
 Frame = +1

Query: 4   RGNNEKLQEELDRERAKYSELLKKHKQVTEHLGSMLIENTNL 129
           +G++  +++ L  E  K  +   +HK++ + L S+ +EN +L
Sbjct: 389 KGSSSDMEKRLRAEMQKAEDKAVEHKEILDQLESLKLENRHL 430


>AK056465-1|BAB71192.1|  703|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31903 fis, clone NT2RP7004260, weakly similar to
           MYOSIN HEAVY CHAIN, NONMUSCLE TYPE B. ).
          Length = 703

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/42 (26%), Positives = 25/42 (59%)
 Frame = +1

Query: 4   RGNNEKLQEELDRERAKYSELLKKHKQVTEHLGSMLIENTNL 129
           +G++  +++ L  E  K  +   +HK++ + L S+ +EN +L
Sbjct: 435 KGSSSDMEKRLRAEMQKAEDKAVEHKEILDQLESLKLENRHL 476


>AK023448-1|BAB14578.1|  541|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13386 fis, clone PLACE1001104, weakly similar to
           MYOSIN HEAVY CHAIN, NON-MUSCLE. ).
          Length = 541

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/42 (26%), Positives = 25/42 (59%)
 Frame = +1

Query: 4   RGNNEKLQEELDRERAKYSELLKKHKQVTEHLGSMLIENTNL 129
           +G++  +++ L  E  K  +   +HK++ + L S+ +EN +L
Sbjct: 435 KGSSSDMEKRLRAEMQKAEDKAVEHKEILDQLESLKLENRHL 476


>CR456470-1|CAG30356.1|  578|Homo sapiens dJ439F8.1 protein.
          Length = 578

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 10  NNEKLQEELDRERAKYSELLKKHKQV 87
           N E L++ELDRER +  EL +K ++V
Sbjct: 106 NAEMLRQELDRERQRRMELEQKVQEV 131


>BC129837-1|AAI29838.1|  578|Homo sapiens death-inducing-protein
           protein.
          Length = 578

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 10  NNEKLQEELDRERAKYSELLKKHKQV 87
           N E L++ELDRER +  EL +K ++V
Sbjct: 106 NAEMLRQELDRERQRRMELEQKVQEV 131


>AL096766-2|CAI18820.1|  578|Homo sapiens protein ( Human DNA
           sequence from clone RP6-59H18 on chromosome 22. ).
          Length = 578

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 10  NNEKLQEELDRERAKYSELLKKHKQV 87
           N E L++ELDRER +  EL +K ++V
Sbjct: 106 NAEMLRQELDRERQRRMELEQKVQEV 131


>AL021392-1|CAI20966.1|  578|Homo sapiens protein ( Human DNA
           sequence from clone RP3-439F8 on chromosome 22q13.31-33.
           ).
          Length = 578

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 10  NNEKLQEELDRERAKYSELLKKHKQV 87
           N E L++ELDRER +  EL +K ++V
Sbjct: 106 NAEMLRQELDRERQRRMELEQKVQEV 131


>AB018310-1|BAA34487.2|  598|Homo sapiens KIAA0767 protein protein.
          Length = 598

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 10  NNEKLQEELDRERAKYSELLKKHKQV 87
           N E L++ELDRER +  EL +K ++V
Sbjct: 126 NAEMLRQELDRERQRRMELEQKVQEV 151


>BC004496-1|AAH04496.1|  209|Homo sapiens Unknown (protein for
           MGC:11099) protein.
          Length = 209

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +3

Query: 75  TQTSHRTPR*YADREHQFV*KSATGRSGQG*TGEEVKRTDGT 200
           T + H  P   AD +HQ V  +  G      TGEE+ +T GT
Sbjct: 103 TNSLHHAPGKAADIQHQPVKAAKRGNISCKATGEELPKTMGT 144


>AK023738-1|BAB14662.1|  475|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13676 fis, clone PLACE1011922, weakly similar to
           MYOSIN HEAVY CHAIN, NONMUSCLE TYPE B. ).
          Length = 475

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/42 (26%), Positives = 24/42 (57%)
 Frame = +1

Query: 4   RGNNEKLQEELDRERAKYSELLKKHKQVTEHLGSMLIENTNL 129
           +G++   ++ L  E  K  +   +HK++ + L S+ +EN +L
Sbjct: 389 KGSSSDTEKRLRAEMQKAEDKAVEHKEILDQLESLKLENRHL 430


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.303    0.122    0.327 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,514,073
Number of Sequences: 237096
Number of extensions: 453683
Number of successful extensions: 926
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 76,859,062
effective HSP length: 64
effective length of database: 61,684,918
effective search space used: 1357068196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)