Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_P13
(260 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 0.45
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 0.45
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 29 0.45
Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical pr... 27 1.4
Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical pr... 27 1.4
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 1.4
Z81094-4|CAB03152.1| 528|Caenorhabditis elegans Hypothetical pr... 27 2.4
AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical ... 27 2.4
AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical ... 27 2.4
U97007-6|AAB52296.3| 468|Caenorhabditis elegans Hypothetical pr... 26 4.2
U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence ... 26 4.2
Z95559-2|CAB09000.3| 520|Caenorhabditis elegans Hypothetical pr... 25 5.6
AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical ... 25 5.6
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 25 7.4
U56961-3|AAK39294.1| 634|Caenorhabditis elegans Hypothetical pr... 25 7.4
U40940-3|AAN39667.1| 455|Caenorhabditis elegans Nuclear hormone... 25 7.4
U40940-2|AAM69090.1| 434|Caenorhabditis elegans Nuclear hormone... 25 7.4
U40940-1|AAM69089.1| 439|Caenorhabditis elegans Nuclear hormone... 25 7.4
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 25 7.4
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 25 7.4
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 25 7.4
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 25 7.4
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 25 7.4
AF273782-1|AAG15131.1| 439|Caenorhabditis elegans nuclear recep... 25 7.4
AF016688-4|AAB66075.2| 481|Caenorhabditis elegans Hypothetical ... 25 7.4
AC024766-1|AAF59490.2| 160|Caenorhabditis elegans Hypothetical ... 25 7.4
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 25 7.4
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 25 7.4
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 25 9.8
AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical ... 25 9.8
AF040661-16|AAG24218.1| 318|Caenorhabditis elegans Hypothetical... 25 9.8
AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical ... 25 9.8
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 29.1 bits (62), Expect = 0.45
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +1
Query: 16 EKLQEELDRERAKYSELLKKHKQVTEHLGSMLI 114
E+++ ELD+ R K L+++H+Q+ + + S L+
Sbjct: 1694 EQVEVELDKHRDKVPSLVEQHEQLKKDIDSFLL 1726
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 29.1 bits (62), Expect = 0.45
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +1
Query: 16 EKLQEELDRERAKYSELLKKHKQVTEHLGSMLI 114
E+++ ELD+ R K L+++H+Q+ + + S L+
Sbjct: 1694 EQVEVELDKHRDKVPSLVEQHEQLKKDIDSFLL 1726
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 29.1 bits (62), Expect = 0.45
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +1
Query: 16 EKLQEELDRERAKYSELLKKHKQVTEHLGSMLI 114
E+++ ELD+ R K L+++H+Q+ + + S L+
Sbjct: 1694 EQVEVELDKHRDKVPSLVEQHEQLKKDIDSFLL 1726
>Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical protein
F29D11.2 protein.
Length = 1153
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 31 ELDRERAKYSELLKKHKQVTEHLG 102
ELD ++ +Y+EL K H+++ + LG
Sbjct: 1004 ELDGDKHRYNELRKAHRKIAKILG 1027
>Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical protein
F29D11.2 protein.
Length = 1153
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 31 ELDRERAKYSELLKKHKQVTEHLG 102
ELD ++ +Y+EL K H+++ + LG
Sbjct: 1004 ELDGDKHRYNELRKAHRKIAKILG 1027
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 1.4
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 10 NNEKLQEELDRERAKYSELLKKHKQV 87
+++ L+E+LD + AK E +KH+QV
Sbjct: 3739 SHDGLREDLDPDTAKLIEFAEKHRQV 3764
>Z81094-4|CAB03152.1| 528|Caenorhabditis elegans Hypothetical
protein F58G11.6 protein.
Length = 528
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 19 KLQEELDRERAKYSELLKKHKQ-VTEHLGSM 108
K +E LD +KY LLK HK + +HLG +
Sbjct: 177 KFKERLDFFFSKYIPLLKVHKMPLLDHLGGV 207
>AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical
protein K10G6.4 protein.
Length = 455
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 10 NNEKLQEEL-DRERAKYSELLKKHKQVTEHLGSML 111
N EKL++EL D E+ + SE +KH+ +T L S L
Sbjct: 401 NVEKLRKELRDSEKRRLSEK-EKHQAITSELKSAL 434
>AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical
protein Y102A11A.9 protein.
Length = 332
Score = 26.6 bits (56), Expect = 2.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 28 EELDRERAKYSELLKKHKQVTEHLGSMLIE 117
+ L +ER SE+ KK++Q E L LIE
Sbjct: 261 DSLQKEREDLSEIRKKNEQKIEGLSQELIE 290
>U97007-6|AAB52296.3| 468|Caenorhabditis elegans Hypothetical
protein ZC196.4 protein.
Length = 468
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 31 ELDRERAKYSELLKKHKQVTEHLGSMLIENTN 126
+L R R + +L K+ EHL + L++NT+
Sbjct: 4 DLTRFRESWDDLYLKNNSFFEHLFNFLVKNTH 35
>U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence of
males (increasedx chromosome loss) protein 10 protein.
Length = 490
Score = 25.8 bits (54), Expect = 4.2
Identities = 18/75 (24%), Positives = 29/75 (38%)
Frame = +1
Query: 16 EKLQEELDRERAKYSELLKKHKQVTEHLGSMLIENTNLCXXXXXXXXXXXXXXXXXNELT 195
EK++EEL K ++LL K H ++ E +N EL
Sbjct: 152 EKIREELLEAEKKKNDLLAKQSIRKRHEHELINEQSNAKAELKNVVNEYTETRQINEELD 211
Query: 196 EQCNQTIENLNTNEK 240
+Q + I ++ EK
Sbjct: 212 KQKEEAILHIQALEK 226
>Z95559-2|CAB09000.3| 520|Caenorhabditis elegans Hypothetical
protein Y41E3.3 protein.
Length = 520
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 16 EKLQEELDRERAKYSELLKKHKQVTEHLGSML 111
EKLQE+++ E KY L + K+VT +ML
Sbjct: 423 EKLQEDINAELEKYKR-LNEAKRVTGCASAML 453
>AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical
protein C16A11.5 protein.
Length = 643
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 16 EKLQEELDRERAKYSELLKKHKQVT 90
++ EEL++ER KY E+L + T
Sbjct: 567 QQYTEELEQERQKYQEMLTARSEET 591
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +1
Query: 16 EKLQEELDRERAKYSELLKKHKQV 87
E +++E+D + +Y E LKK +++
Sbjct: 4449 EGVKQEMDEAKGRYQECLKKGEEI 4472
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +1
Query: 16 EKLQEELDRERAKYSELLKKHKQV 87
E +++E+D + +Y E LKK +++
Sbjct: 4449 EGVKQEMDEAKGRYQECLKKGEEI 4472
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +1
Query: 16 EKLQEELDRERAKYSELLKKHKQV 87
E +++E+D + +Y E LKK +++
Sbjct: 3904 EGVKQEMDEAKGRYQECLKKGEEI 3927
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +1
Query: 16 EKLQEELDRERAKYSELLKKHKQV 87
E +++E+D + +Y E LKK +++
Sbjct: 4449 EGVKQEMDEAKGRYQECLKKGEEI 4472
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +1
Query: 16 EKLQEELDRERAKYSELLKKHKQV 87
E +++E+D + +Y E LKK +++
Sbjct: 4449 EGVKQEMDEAKGRYQECLKKGEEI 4472
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +1
Query: 16 EKLQEELDRERAKYSELLKKHKQV 87
E +++E+D + +Y E LKK +++
Sbjct: 3904 EGVKQEMDEAKGRYQECLKKGEEI 3927
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +1
Query: 16 EKLQEELDRE----RAKYSELLKKHKQVTEHLGSML 111
EKL+ E+D RAK SE+ K +++TE S +
Sbjct: 2593 EKLKAEIDANIEETRAKISEIAGKAEEITEKANSAM 2628
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +1
Query: 16 EKLQEELDRE----RAKYSELLKKHKQVTEHLGSML 111
EKL+ E+D RAK SE+ K +++TE S +
Sbjct: 2593 EKLKAEIDANIEETRAKISEIAGKAEEITEKANSAM 2628
>U56961-3|AAK39294.1| 634|Caenorhabditis elegans Hypothetical
protein T19D7.4 protein.
Length = 634
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 4 RGNNEKLQEELDRERAKYSELLKKHKQVTEHLGSMLIEN 120
R +E + LD++ + ELLK+ ++ E L EN
Sbjct: 130 RSESESGNDVLDKQNERQKELLKQLREQVEDLERTAYEN 168
>U40940-3|AAN39667.1| 455|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 40, isoform c protein.
Length = 455
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +1
Query: 37 DRERAKYSELLKKHKQVTEHLGSMLIE 117
DR++ +Y++ LKK ++ + L M+I+
Sbjct: 104 DRDKIRYTKALKKKREEEKRLKEMVIK 130
>U40940-2|AAM69090.1| 434|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 40, isoform b protein.
Length = 434
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +1
Query: 37 DRERAKYSELLKKHKQVTEHLGSMLIE 117
DR++ +Y++ LKK ++ + L M+I+
Sbjct: 88 DRDKIRYTKALKKKREEEKRLKEMVIK 114
>U40940-1|AAM69089.1| 439|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 40, isoform a protein.
Length = 439
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +1
Query: 37 DRERAKYSELLKKHKQVTEHLGSMLIE 117
DR++ +Y++ LKK ++ + L M+I+
Sbjct: 88 DRDKIRYTKALKKKREEEKRLKEMVIK 114
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +1
Query: 16 EKLQEELDRE----RAKYSELLKKHKQVTEHLGSML 111
EKL+ E+D RAK SE+ K +++TE S +
Sbjct: 407 EKLKAEIDANIEETRAKISEIAGKAEEITEKANSAM 442
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +1
Query: 16 EKLQEELDRERAKYSELLKKHKQV 87
E +++E+D + +Y E LKK +++
Sbjct: 4449 EGVKQEMDEAKGRYQECLKKGEEI 4472
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +1
Query: 16 EKLQEELDRERAKYSELLKKHKQV 87
E +++E+D + +Y E LKK +++
Sbjct: 4449 EGVKQEMDEAKGRYQECLKKGEEI 4472
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +1
Query: 16 EKLQEELDRERAKYSELLKKHKQV 87
E +++E+D + +Y E LKK +++
Sbjct: 3904 EGVKQEMDEAKGRYQECLKKGEEI 3927
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +1
Query: 16 EKLQEELDRERAKYSELLKKHKQV 87
E +++E+D + +Y E LKK +++
Sbjct: 4449 EGVKQEMDEAKGRYQECLKKGEEI 4472
>AF273782-1|AAG15131.1| 439|Caenorhabditis elegans nuclear receptor
NHR-40 protein.
Length = 439
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +1
Query: 37 DRERAKYSELLKKHKQVTEHLGSMLIE 117
DR++ +Y++ LKK ++ + L M+I+
Sbjct: 88 DRDKIRYTKALKKKREEEKRLKEMVIK 114
>AF016688-4|AAB66075.2| 481|Caenorhabditis elegans Hypothetical
protein F18A12.3 protein.
Length = 481
Score = 25.0 bits (52), Expect = 7.4
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 4 RGNN-EKLQEELDRERAKYSELLKKHKQVTEH 96
+GN E +EE+ RE +YS L KK K V E+
Sbjct: 232 KGNGIEPDREEISRELEEYSMLEKKLKIVKEN 263
>AC024766-1|AAF59490.2| 160|Caenorhabditis elegans Hypothetical
protein Y39G10AL.1 protein.
Length = 160
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 25 QEELDRERAKYSELLKKHKQVTEHL 99
+E+L E + SEL KKH++ E +
Sbjct: 66 EEKLHAENLELSELAKKHRKEAEEI 90
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +1
Query: 16 EKLQEELDRE----RAKYSELLKKHKQVTEHLGSML 111
EKL+ E+D RAK SE+ K +++TE S +
Sbjct: 2593 EKLKAEIDANIEETRAKISEIAGKAEEITEKANSAM 2628
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +1
Query: 16 EKLQEELDRE----RAKYSELLKKHKQVTEHLGSML 111
EKL+ E+D RAK SE+ K +++TE S +
Sbjct: 2593 EKLKAEIDANIEETRAKISEIAGKAEEITEKANSAM 2628
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 16 EKLQEELDRERAKYSELLKKHKQVTEHLGSMLIE 117
+KLQ+E+DR + +++K ++E L S L E
Sbjct: 247 QKLQKEVDRLEDELVHEKERYKTISEELDSNLPE 280
>AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical
protein Y39H10B.2 protein.
Length = 232
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/27 (29%), Positives = 20/27 (74%)
Frame = +1
Query: 13 NEKLQEELDRERAKYSELLKKHKQVTE 93
NE++Q++LD AK+ ++ +K ++ ++
Sbjct: 174 NERMQKQLDELNAKFEDVNRKLQKASD 200
>AF040661-16|AAG24218.1| 318|Caenorhabditis elegans Hypothetical
protein W10G11.11 protein.
Length = 318
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = -2
Query: 199 VPSVRLTSSPVYPWPLRPVALFHTNWCSRSA 107
+P +++ SSP+ PW P W A
Sbjct: 255 LPDLKIDSSPLPPWSFPPSLNVEAIWAENCA 285
>AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical
protein F20H11.4 protein.
Length = 446
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -2
Query: 133 HTNWCSRSAYYRGVR*LVCVSSTVQNIWHVPC--RVPLVVSRC 11
H NW + +R + + TV++ WH+ + P VV C
Sbjct: 172 HANWMTMPDKFRYISAQGPMDQTVEDFWHMVYTEKAPAVVMIC 214
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.303 0.122 0.327
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,567,070
Number of Sequences: 27780
Number of extensions: 73197
Number of successful extensions: 201
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 12,740,198
effective HSP length: 65
effective length of database: 10,934,498
effective search space used: 229624458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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