Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_P12
         (430 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    26   0.49 
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    26   0.65 
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    26   0.65 
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   3.5  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   6.1  
AF513639-1|AAM53611.1|  195|Anopheles gambiae glutathione S-tran...    22   8.0  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 26.2 bits (55), Expect = 0.49
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +1

Query: 322 EPIFSMFASAFPAATLSYISQSTSFLVRSPGTYSP 426
           +P+F+       A +  Y   ST FL R PGT  P
Sbjct: 207 DPLFANNIERDSALSWQYFGSSTGFLRRFPGTAWP 241


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 25.8 bits (54), Expect = 0.65
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 263 DGLLEYFKPLHDWLKAENQRTGEY 192
           D LL  FKP HDW   + +   +Y
Sbjct: 600 DRLLHCFKPTHDWGPEDPELNAKY 623


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 25.8 bits (54), Expect = 0.65
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 263 DGLLEYFKPLHDWLKAENQRTGEY 192
           D LL  FKP HDW   + +   +Y
Sbjct: 600 DRLLHCFKPTHDWGPEDPELNAKY 623


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 253  SSTSSRCTIGSRRKTREPESTSDGSRVKYNTVRRNRS 143
            S + SR   GSR ++R    +  GSR    +  R+RS
Sbjct: 1065 SRSRSRSGSGSRSRSRSGSGSRAGSRAGSGSRSRSRS 1101


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 403 SPRNSSTAIYTKASPRG 353
           SPR  S AIY + +P G
Sbjct: 150 SPRPESFAIYKRVTPNG 166


>AF513639-1|AAM53611.1|  195|Anopheles gambiae glutathione
           S-transferase S1-2 protein.
          Length = 195

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 377 IYESVAAGNALANMLKMGSSKPWPDAM 297
           +++SVA    LAN + +  +  W + M
Sbjct: 53  VHQSVAMSRYLANQVGLAGADDWENLM 79


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 409,951
Number of Sequences: 2352
Number of extensions: 8027
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)