Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_P12
         (430 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   0.83 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   1.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   1.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   1.9  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   2.5  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   4.4  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   4.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.7  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.8 bits (49), Expect = 0.83
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = -3

Query: 269 KADGLLEYFKPLHDWLKAENQRTGEYIGWEPSKIQYCTEEQIDALNAREPTTE 111
           KADG   + KP   W KA     G+Y   + S      E+   ++N  + T E
Sbjct: 701 KADG---FPKPQVTWKKAAGDTPGDYTDLKLSNPDISVEDGTLSINNIQKTNE 750


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 262 TVCSSTSSRCTIGSRRKTREPE 197
           T CS  + RC  G  RK+ E +
Sbjct: 290 TTCSGHTVRCFTGGPRKSHESQ 311


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 298  IASGQGFDEPIFSMFASAFPAATLSYISQSTS 393
            + + QG D+  +++     P+A + Y++ STS
Sbjct: 1386 VENAQGNDKLHYTLTVQVPPSAPVLYVTSSTS 1417


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 298  IASGQGFDEPIFSMFASAFPAATLSYISQSTS 393
            + + QG D+  +++     P+A + Y++ STS
Sbjct: 1382 VENAQGNDKLHYTLTVQVPPSAPVLYVTSSTS 1413


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -1

Query: 220 RRKTREPEST-SDGSRVKYNTVRRNR 146
           R  T+ P++  S GSR  +N + +NR
Sbjct: 35  RTVTKRPKTKKSQGSRTTHNELEKNR 60


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +3

Query: 75  IALESRADRLL*LGRRFPRVQSVDLFLRTVLYFTRLPSDV-LSGSLVFRLE 224
           +A    A R   L  R P ++S+ L     L+F ++  DV +   LV  LE
Sbjct: 372 VAWPDDAGRFAKLLLRLPAIRSIGLKCLEYLFFFKMIGDVPIDDFLVEMLE 422


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +3

Query: 75  IALESRADRLL*LGRRFPRVQSVDLFLRTVLYFTRLPSDV-LSGSLVFRLE 224
           +A    A R   L  R P ++S+ L     L+F ++  DV +   LV  LE
Sbjct: 372 VAWPDDAGRFAKLLLRLPAIRSIGLKCLEYLFFFKMIGDVPIDDFLVEMLE 422


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 427 PASTSPGTSPRNSSTAIYTKASPRGM 350
           PA+++ GT P   S  + T  +   M
Sbjct: 229 PAASATGTGPATPSAVVATSNATAAM 254


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,193
Number of Sequences: 438
Number of extensions: 1980
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)