Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_P11
         (455 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   1.0  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   4.1  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   5.5  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   5.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   5.5  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.2  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    20   9.5  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    20   9.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    20   9.5  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -3

Query: 222 PYKYHVGKILVFFLSPLSGIV 160
           P  + +G IL+FF+ PL+ ++
Sbjct: 234 PCVFFLGSILIFFIFPLAILI 254


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 396 NVRYLPQTSDICH 358
           N++YLP    +CH
Sbjct: 170 NLQYLPMDRQLCH 182


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 444 RPRGCQICHKR 412
           +P  CQ CHKR
Sbjct: 8   KPFECQECHKR 18


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 84  FKPAPVVTLCFEFERINCLRG*EFRLLF 167
           F+P+      FE +RIN       R+LF
Sbjct: 292 FRPSFTAARFFEIDRINAESRKPIRILF 319


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 444 RPRGCQICHKR 412
           +P  CQ CHKR
Sbjct: 161 KPFECQECHKR 171


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 245 YMLKLTVIR*IVSGYYRSVTLLLS 316
           Y   L VI  I  G YR++ LLL+
Sbjct: 158 YTYFLCVIVCIFRGKYRNINLLLT 181


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 381 PQTSDICHKRQI*HLRAPH 325
           PQT  +C+K  +     PH
Sbjct: 346 PQTDRLCNKNFVIEASKPH 364


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 5/9 (55%), Positives = 9/9 (100%)
 Frame = +3

Query: 405 ISDVCDRFD 431
           +SD+CD+F+
Sbjct: 207 LSDICDKFE 215


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 5/9 (55%), Positives = 9/9 (100%)
 Frame = +3

Query: 405 ISDVCDRFD 431
           +SD+CD+F+
Sbjct: 163 LSDICDKFE 171


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,578
Number of Sequences: 336
Number of extensions: 2166
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)