BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_P11
(455 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X95956-1|CAA65194.1| 896|Drosophila melanogaster rotated abdome... 30 1.3
AY071270-1|AAL48892.1| 665|Drosophila melanogaster RE30211p pro... 30 1.3
AE014296-1978|AAF50046.2| 886|Drosophila melanogaster CG6097-PA... 30 1.3
AB176550-1|BAD54754.1| 886|Drosophila melanogaster protein O-ma... 30 1.3
AY102693-1|AAM27522.1| 433|Drosophila melanogaster LD45181p pro... 29 3.0
AE014297-1932|AAF55129.1| 433|Drosophila melanogaster CG6912-PA... 29 3.0
>X95956-1|CAA65194.1| 896|Drosophila melanogaster rotated abdomen
protein protein.
Length = 896
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 197 FWFFFCP-LCQE**AELLAP*AIYSLKFKAKCNNWS 93
FWF F P +C LLAP A+Y+L +AK + WS
Sbjct: 259 FWFRFLPAMC----GSLLAP-AVYNLLLEAKLSRWS 289
>AY071270-1|AAL48892.1| 665|Drosophila melanogaster RE30211p
protein.
Length = 665
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 197 FWFFFCP-LCQE**AELLAP*AIYSLKFKAKCNNWS 93
FWF F P +C LLAP A+Y+L +AK + WS
Sbjct: 259 FWFRFLPAMC----GSLLAP-AVYNLLLEAKLSRWS 289
>AE014296-1978|AAF50046.2| 886|Drosophila melanogaster CG6097-PA
protein.
Length = 886
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 197 FWFFFCP-LCQE**AELLAP*AIYSLKFKAKCNNWS 93
FWF F P +C LLAP A+Y+L +AK + WS
Sbjct: 259 FWFRFLPAMC----GSLLAP-AVYNLLLEAKLSRWS 289
>AB176550-1|BAD54754.1| 886|Drosophila melanogaster protein
O-mannosyltransferase 1 protein.
Length = 886
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 197 FWFFFCP-LCQE**AELLAP*AIYSLKFKAKCNNWS 93
FWF F P +C LLAP A+Y+L +AK + WS
Sbjct: 259 FWFRFLPAMC----GSLLAP-AVYNLLLEAKLSRWS 289
>AY102693-1|AAM27522.1| 433|Drosophila melanogaster LD45181p
protein.
Length = 433
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 180 TKKKPKFCLRDICTAPIFFLSP 245
+ K+ KFC +CTAP+ +L P
Sbjct: 317 SNKENKFCDSRVCTAPVVYLKP 338
>AE014297-1932|AAF55129.1| 433|Drosophila melanogaster CG6912-PA
protein.
Length = 433
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 180 TKKKPKFCLRDICTAPIFFLSP 245
+ K+ KFC +CTAP+ +L P
Sbjct: 317 SNKENKFCDSRVCTAPVVYLKP 338
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,876,573
Number of Sequences: 53049
Number of extensions: 377084
Number of successful extensions: 595
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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