Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_P10
(577 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 26 0.26
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 25 0.61
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 2.5
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 2.5
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 2.5
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 2.5
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 2.5
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 2.5
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 23 2.5
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 2.5
AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein. 22 4.3
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 21 7.5
AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase prot... 21 7.5
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 21 7.5
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 7.5
EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive pep... 21 9.9
AY873913-1|AAW67569.2| 377|Tribolium castaneum chitinase 2 prot... 21 9.9
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 21 9.9
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 21 9.9
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 21 9.9
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 25.8 bits (54), Expect = 0.26
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = +1
Query: 343 SAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHGSDL 522
S T+SP S+ SP APR T I + + P + E + + ++
Sbjct: 195 SRTTTSPTKVKASKASPAAAPRSVATPTGIPTPSTSASPPTVNIKKESPQMQSYRPTGNI 254
Query: 523 TETGAKTES 549
T G+ T S
Sbjct: 255 TPHGSNTSS 263
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 24.6 bits (51), Expect = 0.61
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +1
Query: 346 APTSSPELGAHSRGSPQGAPRRRETSHRITREAA 447
AP P H R + PR H +TR AA
Sbjct: 313 APRERPRATDHQRRNEPKRPRPNIDRHEVTRPAA 346
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 439 EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 528
+ A ++P+H P PG G + G D T+
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 439 EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 528
+ A ++P+H P PG G + G D T+
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.6 bits (46), Expect = 2.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 439 EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 528
+ A ++P+H P PG G + G D T+
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 439 EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 528
+ A ++P+H P PG G + G D T+
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.6 bits (46), Expect = 2.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 439 EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 528
+ A ++P+H P PG G + G D T+
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 439 EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 528
+ A ++P+H P PG G + G D T+
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 22.6 bits (46), Expect = 2.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 439 EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 528
+ A ++P+H P PG G + G D T+
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 439 EAANRHPEHTKGEPEPGEGSRRQHGSDLTE 528
+ A ++P+H P PG G + G D T+
Sbjct: 47 QVAPQYPQHPYAAPAPGHGLQPTMG-DYTQ 75
>AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein.
Length = 253
Score = 21.8 bits (44), Expect = 4.3
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 261 PTPWCSRSPSYPT 299
PTP CS + S PT
Sbjct: 192 PTPTCSEASSSPT 204
Score = 20.6 bits (41), Expect = 9.9
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 142 SIRGVTPDHRSVSEGNAGE 86
S++ + DH + + GN+GE
Sbjct: 150 SLKQMIEDHENDTTGNSGE 168
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 21.0 bits (42), Expect = 7.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 25 NFASNSHRLRHRHGRQVLRVVRLRCPRSRSDGPA 126
+F + + RLR+R G++ VV R SDG A
Sbjct: 6 DFDTRTVRLRNRVGKRKGNVVADILSRYPSDGEA 39
>AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase
protein.
Length = 590
Score = 21.0 bits (42), Expect = 7.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 455 IQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAA 553
+ L + + V N+ +T QK+AP+L A
Sbjct: 524 LPTVLSMANDKVANVRFNVAKTLQKIAPQLDQA 556
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2
Query: 545 KAAYDDFVKH 574
+AAY+D VKH
Sbjct: 167 RAAYEDIVKH 176
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1
Query: 451 RHPEHTKGEPEPGEGSRRQHGSDLTE 528
++P+H P PG G + G D T+
Sbjct: 7 QYPQHPYAAPAPGHGLQPTMG-DYTQ 31
>EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive
peptide receptor 1 protein.
Length = 374
Score = 20.6 bits (41), Expect = 9.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2
Query: 357 ACWSTSLALPFASVNAPCRLLDNSETCCTMESEPSFSALFK 235
A + SLA ++ N L ++ C T+ S P F LFK
Sbjct: 289 ATFIQSLAPLNSAANPIIYCLFSTHFCRTLGSLPPFKWLFK 329
>AY873913-1|AAW67569.2| 377|Tribolium castaneum chitinase 2
protein.
Length = 377
Score = 20.6 bits (41), Expect = 9.9
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = -2
Query: 492 FARFWLSFSVFWMAV 448
FA+FW++ ++F + V
Sbjct: 2 FAKFWVNLALFCLHV 16
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 20.6 bits (41), Expect = 9.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 536 APVSVRSDPC*RRLPSPGSGSPLV 465
AP+ + P R +PSP SP++
Sbjct: 64 APIRPVALPPKREIPSPKRSSPIL 87
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +2
Query: 14 ADLATSLRTRTDSDTAMAAKCFVLFACV 97
+DL LR + +++ + C V+F C+
Sbjct: 82 SDLQQKLRYFEEVFSSLLSCCSVIFGCI 109
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +2
Query: 14 ADLATSLRTRTDSDTAMAAKCFVLFACV 97
+DL LR + +++ + C V+F C+
Sbjct: 82 SDLQQKLRYFEEVFSSLLSCCSVIFGCI 109
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,501
Number of Sequences: 336
Number of extensions: 2413
Number of successful extensions: 21
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -