Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_P09
(488 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33138| Best HMM Match : Mov34 (HMM E-Value=0) 260 4e-70
SB_33626| Best HMM Match : Mov34 (HMM E-Value=0.71) 38 0.004
SB_38777| Best HMM Match : Mov34 (HMM E-Value=1.6e-19) 36 0.018
SB_51467| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_45334| Best HMM Match : Mov34 (HMM E-Value=0.0076) 31 0.51
SB_41612| Best HMM Match : OstA (HMM E-Value=5.2) 29 2.1
SB_40663| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_12467| Best HMM Match : Ank (HMM E-Value=3.2e-10) 28 3.6
SB_50579| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_6739| Best HMM Match : RCC1 (HMM E-Value=1.6e-34) 28 4.7
SB_38881| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_18903| Best HMM Match : DUF1181 (HMM E-Value=8.2) 27 6.3
SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_36313| Best HMM Match : Crl (HMM E-Value=5.1) 27 8.3
SB_8166| Best HMM Match : DUF729 (HMM E-Value=1.6) 27 8.3
SB_16246| Best HMM Match : Penaeidin (HMM E-Value=3) 27 8.3
>SB_33138| Best HMM Match : Mov34 (HMM E-Value=0)
Length = 195
Score = 260 bits (637), Expect = 4e-70
Identities = 118/139 (84%), Positives = 129/139 (92%)
Frame = +1
Query: 13 YDKKQQQDILAAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLLLGKVDANTM 192
YD++QQQ+IL AKPW+KDPH+FK+IKISALALLKMVMHARSGG LEVMGL+LGKVD +TM
Sbjct: 28 YDRQQQQEILQAKPWQKDPHYFKNIKISALALLKMVMHARSGGNLEVMGLMLGKVDGDTM 87
Query: 193 IVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGI 372
IVMD+FALPVEGTETRVNAQA AYEYM AYIE+AK VGR ENAIGWYHSHPGYGCWLSGI
Sbjct: 88 IVMDAFALPVEGTETRVNAQAAAYEYMAAYIESAKSVGRLENAIGWYHSHPGYGCWLSGI 147
Query: 373 DVSTQMLNQNFHEPFVAIV 429
DV TQM+NQ F EPFVAIV
Sbjct: 148 DVGTQMVNQQFQEPFVAIV 166
>SB_33626| Best HMM Match : Mov34 (HMM E-Value=0.71)
Length = 95
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +1
Query: 130 RSGGTLEVMGLLLGK-VDANTMIVMDSFALPVEGTETR 240
R+G +EVMGL+LG+ VD T+ V+D FA+P GT R
Sbjct: 2 RAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTVCR 39
>SB_38777| Best HMM Match : Mov34 (HMM E-Value=1.6e-19)
Length = 431
Score = 35.9 bits (79), Expect = 0.018
Identities = 24/98 (24%), Positives = 42/98 (42%)
Frame = +1
Query: 145 LEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQVGRHENAI 324
+E G+L G + N + +P + T T + + E M Y ++ + +
Sbjct: 284 METCGILTGSLQQNQFCITH-LVIPKQ-TSTTDSCTTLSEEDMFEYQDSHNLI-----TL 336
Query: 325 GWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVIDP 438
GW H+HP ++S +D+ T Q +AIV P
Sbjct: 337 GWIHTHPTQTAFMSSVDLHTHCSYQLMMPEAIAIVCSP 374
>SB_51467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 465
Score = 33.1 bits (72), Expect = 0.13
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Frame = +1
Query: 322 IGWYHSHPGYGCWLSGIDVSTQMLNQNF--------HEPFVAIVIDPVRTISAGK 462
+GWYHSHP Y S D+ +Q+ Q+ EP + ++I P T K
Sbjct: 4 VGWYHSHPSYQADPSVQDIKSQLRYQHALQQGLSGPQEPCLGLIISPYDTYKPTK 58
>SB_45334| Best HMM Match : Mov34 (HMM E-Value=0.0076)
Length = 174
Score = 31.1 bits (67), Expect = 0.51
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 322 IGWYHSHPGYGCWLSGIDVSTQMLNQNF 405
+GWYHSHP + S D+ TQ Q F
Sbjct: 58 VGWYHSHPTFAPNPSVRDIETQAKFQQF 85
>SB_41612| Best HMM Match : OstA (HMM E-Value=5.2)
Length = 442
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = -3
Query: 270 IFVSLSLCIDTSFSTFYRESKRVHNNHSVCVNFTQEQSHN 151
I+ S ++C+ T+ + ++ VH +H++C++ T Q N
Sbjct: 132 IYPSDNICVHTNNQGIHTNNQSVHTSHNICIH-TNNQGLN 170
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -3
Query: 261 SLSLCIDTSFSTFYRESKRVHNNHSVCVNFTQEQSHN 151
S ++CI T+ F ++ VH +H++C++ T Q N
Sbjct: 280 SHNICIYTNNQDFNTNNQGVHTSHNICIH-TNNQGLN 315
>SB_40663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 416
Score = 28.3 bits (60), Expect = 3.6
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = -3
Query: 267 FVSLSLCIDTSFSTFYRESKRVHNNHSVCVNFTQEQSH 154
+ S +C+ T+ +K VH ++++CVN + H
Sbjct: 170 YTSHDICVHTNNQGLNTNNKSVHPSYNICVNTNHQGVH 207
>SB_12467| Best HMM Match : Ank (HMM E-Value=3.2e-10)
Length = 444
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 16 DKKQQQDILAAKPWEK-DPHFFKDIKISA 99
+K QQDI+ +K WEK DP +K+ K+SA
Sbjct: 105 EKTFQQDIVISKEWEKLDPVLYKN-KMSA 132
>SB_50579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 316 NAIGWYHSHPGYGCWLSGIDVST 384
N++ W +S GY +++GIDV+T
Sbjct: 381 NSMSWTNSFGGYRLFINGIDVNT 403
>SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1094
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -1
Query: 239 RVSVPSTGRANESITIIVFASTLPRSNPITSKVPPDRACITIFKSARAEILISLKKC 69
R+ V T + ITI + L S P+T + P+ C KS R ++ + L KC
Sbjct: 77 RIHVNCTKGCEQLITIRDLEAHLKGSCPLTRTICPNSGCNK--KSRRRDLPLHLSKC 131
>SB_6739| Best HMM Match : RCC1 (HMM E-Value=1.6e-34)
Length = 1790
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 19 KKQQQDILAAKPWEKDPHFFKDIKISALALLKMVMHA 129
++ +D+ ++ W P + I +SAL LL++ +HA
Sbjct: 851 RRVSEDLTGSQDWPPPPQEKECIAVSALNLLRLQLHA 887
>SB_38881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 85
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 57 GERSTFFQRYQNLGSRTFENGNAR 128
GE S F +Y N G + +ENG R
Sbjct: 29 GEVSIMFHQYSNPGFKKYENGRVR 52
>SB_18903| Best HMM Match : DUF1181 (HMM E-Value=8.2)
Length = 144
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 57 GERSTFFQRYQNLGSRTFENGNAR 128
GE S F +Y N G + +ENG R
Sbjct: 55 GEVSIMFHQYSNPGFKKYENGRVR 78
>SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1892
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 215 RANESITIIVFASTLPRSNPITSKVPPDRAC 123
RANES T ++ LP+++P S R C
Sbjct: 1750 RANESPTPVLLRQNLPKTHPSNSLEKNSRTC 1780
>SB_36313| Best HMM Match : Crl (HMM E-Value=5.1)
Length = 442
Score = 27.1 bits (57), Expect = 8.3
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +1
Query: 103 ALLKMVMHARSG--GTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ-AQAYEYM 273
A+ + + HA+SG +L + LL V A + +S AL + T++ A+ +
Sbjct: 293 AIAEQIKHAKSGFPRSLTLGQKLLYAVPATPV---ESTALDITPLLTQLEIHVAEDKSFT 349
Query: 274 TAYIEAAKQVGRHENAIGWYHSHPGYGCW 360
T + K+ + + W S P YGCW
Sbjct: 350 TRVRDIFKETKSVKESRRWL-SEPSYGCW 377
>SB_8166| Best HMM Match : DUF729 (HMM E-Value=1.6)
Length = 327
Score = 27.1 bits (57), Expect = 8.3
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +1
Query: 103 ALLKMVMHARSG--GTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ-AQAYEYM 273
A+ + + HA+SG +L + LL V A + +S AL + T++ A+ +
Sbjct: 178 AIAEQIKHAKSGFPRSLTLGQKLLYAVPATPV---ESTALDITPLLTQLEIHVAEDKSFT 234
Query: 274 TAYIEAAKQVGRHENAIGWYHSHPGYGCW 360
T + K+ + + W S P YGCW
Sbjct: 235 TRVRDIFKETKSVKESRRWL-SEPSYGCW 262
>SB_16246| Best HMM Match : Penaeidin (HMM E-Value=3)
Length = 555
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 360 PTSVPRVTVIPTNGILMTAHLFCCFNICCH 271
P S+PR+++ + + T H C + IC H
Sbjct: 498 PLSIPRISL---HELYTTGHRLCVYGICAH 524
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,116,969
Number of Sequences: 59808
Number of extensions: 340177
Number of successful extensions: 1063
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1038380485
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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