Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_P09
(488 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR541678-1|CAG46479.1| 334|Homo sapiens COPS5 protein. 293 3e-79
BC007272-1|AAH07272.1| 334|Homo sapiens COP9 constitutive photo... 293 3e-79
BC001859-1|AAH01859.1| 334|Homo sapiens COP9 constitutive photo... 293 3e-79
BC001187-1|AAH01187.1| 334|Homo sapiens COP9 constitutive photo... 293 3e-79
U65928-1|AAB16847.1| 334|Homo sapiens Jun activation domain bin... 291 1e-78
U70734-1|AAD03468.1| 334|Homo sapiens 38 kDa Mov34 homolog prot... 281 7e-76
AB209134-1|BAD92371.1| 276|Homo sapiens COP9 signalosome subuni... 258 1e-68
U86782-1|AAC51866.1| 310|Homo sapiens 26S proteasome-associated... 132 5e-31
BC066336-1|AAH66336.1| 310|Homo sapiens proteasome (prosome, ma... 132 5e-31
AC009299-2|AAX88940.1| 154|Homo sapiens unknown protein. 125 9e-29
BX470111-2|CAO03574.1| 226|Homo sapiens BRCA1/BRCA2-containing ... 64 2e-10
AY078082-1|AAL82571.1| 179|Homo sapiens Jun activation domain b... 60 3e-09
U54559-1|AAD03465.1| 352|Homo sapiens translation initiation fa... 54 2e-07
CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein. 54 2e-07
BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation ... 54 2e-07
BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation ... 54 2e-07
AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation ... 54 2e-07
AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation ... 54 2e-07
AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation ... 54 2e-07
X64643-1|CAA45917.1| 291|Homo sapiens C6.1A protein. 49 1e-05
S72931-1|AAB30469.2| 363|Homo sapiens T-cell receptor alpha cha... 49 1e-05
S68015-1|AAB29005.2| 321|Homo sapiens c6.1A protein. 49 1e-05
BX470111-6|CAO03576.1| 247|Homo sapiens BRCA1/BRCA2-containing ... 49 1e-05
BX470111-5|CAI41654.1| 291|Homo sapiens BRCA1/BRCA2-containing ... 49 1e-05
BX470111-4|CAO03575.1| 292|Homo sapiens BRCA1/BRCA2-containing ... 49 1e-05
BX470111-3|CAI41655.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 49 1e-05
BX293995-4|CAO03602.1| 247|Homo sapiens BRCA1/BRCA2-containing ... 49 1e-05
BX293995-3|CAH70538.1| 291|Homo sapiens BRCA1/BRCA2-containing ... 49 1e-05
BX293995-2|CAO03601.1| 292|Homo sapiens BRCA1/BRCA2-containing ... 49 1e-05
BX293995-1|CAH70537.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 49 1e-05
BC006540-1|AAH06540.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 49 1e-05
BC002999-1|AAH02999.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 49 1e-05
AY438030-1|AAR30498.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 49 1e-05
BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein. 48 1e-05
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 46 7e-05
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 46 7e-05
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 46 7e-05
AL450024-1|CAH70737.1| 828|Homo sapiens myb-like, SWIRM and MPN... 45 1e-04
AL035411-1|CAI21908.1| 828|Homo sapiens myb-like, SWIRM and MPN... 45 1e-04
AB067502-1|BAB67808.1| 726|Homo sapiens KIAA1915 protein protein. 45 1e-04
BX537912-1|CAD97896.1| 234|Homo sapiens hypothetical protein pr... 37 0.033
BX470111-1|CAO03573.1| 90|Homo sapiens BRCA1/BRCA2-containing ... 35 0.17
U73522-1|AAD05037.1| 424|Homo sapiens AMSH protein. 33 0.40
BC101469-1|AAI01470.1| 424|Homo sapiens STAM binding protein pr... 33 0.40
BC101467-1|AAI01468.1| 424|Homo sapiens STAM binding protein pr... 33 0.40
BC065574-1|AAH65574.1| 424|Homo sapiens STAM binding protein pr... 33 0.40
BC007682-1|AAH07682.1| 424|Homo sapiens STAM binding protein pr... 33 0.40
AC073046-1|AAX88908.1| 424|Homo sapiens unknown protein. 33 0.40
BC010846-1|AAH10846.2| 436|Homo sapiens STAM binding protein-li... 33 0.70
AL157394-5|CAI13863.1| 270|Homo sapiens novel Mov34/MPN/PAD-1 f... 33 0.70
AL157394-4|CAI13862.1| 461|Homo sapiens novel Mov34/MPN/PAD-1 f... 33 0.70
AL157394-3|CAI13861.1| 436|Homo sapiens novel Mov34/MPN/PAD-1 f... 33 0.70
AB037794-1|BAA92611.1| 463|Homo sapiens KIAA1373 protein protein. 33 0.70
AB010120-1|BAC77766.1| 436|Homo sapiens AMSH-LP protein. 33 0.70
BC032652-1|AAH32652.1| 471|Homo sapiens MPN domain containing p... 32 0.93
AC007292-1|AAD24592.1| 498|Homo sapiens R31167_1, partial prote... 32 0.93
AK131343-1|BAD18499.1| 133|Homo sapiens protein ( Homo sapiens ... 31 2.1
BC009382-1|AAH09382.1| 167|Homo sapiens chromosome 1 open readi... 29 8.6
AY902195-1|AAX07133.1| 167|Homo sapiens neuroblastoma derived s... 29 8.6
AL359853-1|CAH70381.1| 167|Homo sapiens chromosome 1 open readi... 29 8.6
>CR541678-1|CAG46479.1| 334|Homo sapiens COPS5 protein.
Length = 334
Score = 293 bits (718), Expect = 3e-79
Identities = 138/158 (87%), Positives = 143/158 (90%)
Frame = +1
Query: 13 YDKKQQQDILAAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLLLGKVDANTM 192
YDKKQQQ+ILAAKPW KD H+FK KISALALLKMVMHARSGG LEVMGL+LGKVD TM
Sbjct: 31 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM 90
Query: 193 IVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGI 372
I+MDSFALPVEGTETRVNAQA AYEYM AYIE AKQVGR ENAIGWYHSHPGYGCWLSGI
Sbjct: 91 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI 150
Query: 373 DVSTQMLNQNFHEPFVAIVIDPVRTISAGKVCLGAFRT 486
DVSTQMLNQ F EPFVA+VIDP RTISAGKV LGAFRT
Sbjct: 151 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRT 188
>BC007272-1|AAH07272.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 293 bits (718), Expect = 3e-79
Identities = 138/158 (87%), Positives = 143/158 (90%)
Frame = +1
Query: 13 YDKKQQQDILAAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLLLGKVDANTM 192
YDKKQQQ+ILAAKPW KD H+FK KISALALLKMVMHARSGG LEVMGL+LGKVD TM
Sbjct: 31 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM 90
Query: 193 IVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGI 372
I+MDSFALPVEGTETRVNAQA AYEYM AYIE AKQVGR ENAIGWYHSHPGYGCWLSGI
Sbjct: 91 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI 150
Query: 373 DVSTQMLNQNFHEPFVAIVIDPVRTISAGKVCLGAFRT 486
DVSTQMLNQ F EPFVA+VIDP RTISAGKV LGAFRT
Sbjct: 151 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRT 188
>BC001859-1|AAH01859.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 293 bits (718), Expect = 3e-79
Identities = 138/158 (87%), Positives = 143/158 (90%)
Frame = +1
Query: 13 YDKKQQQDILAAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLLLGKVDANTM 192
YDKKQQQ+ILAAKPW KD H+FK KISALALLKMVMHARSGG LEVMGL+LGKVD TM
Sbjct: 31 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM 90
Query: 193 IVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGI 372
I+MDSFALPVEGTETRVNAQA AYEYM AYIE AKQVGR ENAIGWYHSHPGYGCWLSGI
Sbjct: 91 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI 150
Query: 373 DVSTQMLNQNFHEPFVAIVIDPVRTISAGKVCLGAFRT 486
DVSTQMLNQ F EPFVA+VIDP RTISAGKV LGAFRT
Sbjct: 151 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRT 188
>BC001187-1|AAH01187.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 293 bits (718), Expect = 3e-79
Identities = 138/158 (87%), Positives = 143/158 (90%)
Frame = +1
Query: 13 YDKKQQQDILAAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLLLGKVDANTM 192
YDKKQQQ+ILAAKPW KD H+FK KISALALLKMVMHARSGG LEVMGL+LGKVD TM
Sbjct: 31 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM 90
Query: 193 IVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGI 372
I+MDSFALPVEGTETRVNAQA AYEYM AYIE AKQVGR ENAIGWYHSHPGYGCWLSGI
Sbjct: 91 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI 150
Query: 373 DVSTQMLNQNFHEPFVAIVIDPVRTISAGKVCLGAFRT 486
DVSTQMLNQ F EPFVA+VIDP RTISAGKV LGAFRT
Sbjct: 151 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRT 188
>U65928-1|AAB16847.1| 334|Homo sapiens Jun activation domain
binding protein protein.
Length = 334
Score = 291 bits (713), Expect = 1e-78
Identities = 137/158 (86%), Positives = 142/158 (89%)
Frame = +1
Query: 13 YDKKQQQDILAAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLLLGKVDANTM 192
YDKKQQQ+ILAAKPW KD H+FK KISALALLKMVMHARSGG LEVMGL+LGKVD TM
Sbjct: 31 YDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM 90
Query: 193 IVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGI 372
I+MDSFALPVEGTETRVNAQA AYEYM AYIE AKQVG ENAIGWYHSHPGYGCWLSGI
Sbjct: 91 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGHLENAIGWYHSHPGYGCWLSGI 150
Query: 373 DVSTQMLNQNFHEPFVAIVIDPVRTISAGKVCLGAFRT 486
DVSTQMLNQ F EPFVA+VIDP RTISAGKV LGAFRT
Sbjct: 151 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRT 188
>U70734-1|AAD03468.1| 334|Homo sapiens 38 kDa Mov34 homolog
protein.
Length = 334
Score = 281 bits (690), Expect = 7e-76
Identities = 135/158 (85%), Positives = 140/158 (88%)
Frame = +1
Query: 13 YDKKQQQDILAAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLLLGKVDANTM 192
YDKKQQQ+ILAA KD H+FK KISALALLKMVMHARSGG LEVMGL+LGKVD TM
Sbjct: 31 YDKKQQQEILAANLGTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETM 90
Query: 193 IVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGI 372
I+MDSFALPVEGTETRVNAQA AYEYM AYIE AKQVGR ENAIGWYHSHPGYGCWLSGI
Sbjct: 91 IIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGI 150
Query: 373 DVSTQMLNQNFHEPFVAIVIDPVRTISAGKVCLGAFRT 486
DVSTQMLNQ F EPFVA+VIDP RTISAGKV LGAFRT
Sbjct: 151 DVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRT 188
>AB209134-1|BAD92371.1| 276|Homo sapiens COP9 signalosome subunit 5
variant protein.
Length = 276
Score = 258 bits (631), Expect = 1e-68
Identities = 122/139 (87%), Positives = 126/139 (90%)
Frame = +1
Query: 70 HFFKDIKISALALLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNA 249
H+FK KISALALLKMVMHARSGG LEVMGL+LGKVD TMI+MDSFALPVEGTETRVNA
Sbjct: 19 HYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNA 78
Query: 250 QAQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIV 429
QA AYEYM AYIE AKQVGR ENAIGWYHSHPGYGCWLSGIDVSTQMLNQ F EPFVA+V
Sbjct: 79 QAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVV 138
Query: 430 IDPVRTISAGKVCLGAFRT 486
IDP RTISAGKV LGAFRT
Sbjct: 139 IDPTRTISAGKVNLGAFRT 157
>U86782-1|AAC51866.1| 310|Homo sapiens 26S proteasome-associated
pad1 homolog protein.
Length = 310
Score = 132 bits (320), Expect = 5e-31
Identities = 64/136 (47%), Positives = 92/136 (67%), Gaps = 1/136 (0%)
Frame = +1
Query: 79 KDIKISALALLKMVMHARSGGTLEVMGLLLGK-VDANTMIVMDSFALPVEGTETRVNAQA 255
+ + IS+LALLKM+ H R+G +EVMGL+LG+ VD T+ V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 256 QAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVID 435
++ ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 89 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 146
Query: 436 PVRTISAGKVCLGAFR 483
P++++ GKV + AFR
Sbjct: 147 PIQSVK-GKVVIDAFR 161
>BC066336-1|AAH66336.1| 310|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 14 protein.
Length = 310
Score = 132 bits (320), Expect = 5e-31
Identities = 64/136 (47%), Positives = 92/136 (67%), Gaps = 1/136 (0%)
Frame = +1
Query: 79 KDIKISALALLKMVMHARSGGTLEVMGLLLGK-VDANTMIVMDSFALPVEGTETRVNAQA 255
+ + IS+LALLKM+ H R+G +EVMGL+LG+ VD T+ V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 256 QAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVID 435
++ ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 89 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 146
Query: 436 PVRTISAGKVCLGAFR 483
P++++ GKV + AFR
Sbjct: 147 PIQSVK-GKVVIDAFR 161
>AC009299-2|AAX88940.1| 154|Homo sapiens unknown protein.
Length = 154
Score = 125 bits (301), Expect = 9e-29
Identities = 58/125 (46%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
Frame = +1
Query: 79 KDIKISALALLKMVMHARSGGTLEVMGLLLGK-VDANTMIVMDSFALPVEGTETRVNAQA 255
+ + IS+LALLKM+ H R+G +EVMGL+LG+ VD T+ V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 256 QAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVID 435
++ ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 89 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 146
Query: 436 PVRTI 450
P++++
Sbjct: 147 PIQSV 151
>BX470111-2|CAO03574.1| 226|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 226
Score = 64.1 bits (149), Expect = 2e-10
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = +1
Query: 85 IKISALALLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAY 264
+ + + A L + HA S EVMGL +G+VDA ++ + S + + + +
Sbjct: 12 VHLESDAFLVCLNHALSTEKEEVMGLCIGEVDAVRIVHIHSVIILRRSDKRKDRVEISPE 71
Query: 265 EYMTAYIEA---AKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIV 429
+ A EA A+ GR +GWYHSHP W S +DV TQ + Q + FV ++
Sbjct: 72 QLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLI 129
>AY078082-1|AAL82571.1| 179|Homo sapiens Jun activation domain
binding protein protein.
Length = 179
Score = 60.5 bits (140), Expect = 3e-09
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = +1
Query: 388 MLNQNFHEPFVAIVIDPVRTISAGKVCLGAFRT 486
MLNQ F EPFVA+VIDP RTISAGKV LGAFRT
Sbjct: 1 MLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRT 33
>U54559-1|AAD03465.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 54.4 bits (125), Expect = 2e-07
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Frame = +1
Query: 79 KDIKISALALLKMVMHARSGG--TLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 252
K ++I L +LK++ H + G T V G+LLG V + + + + F P T +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP---QHTEDDAD 93
Query: 253 AQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVI 432
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 433 DPVRTISAGKVCLGAFR 483
DP++T + G + L A+R
Sbjct: 153 DPIKT-AQGSLSLKAYR 168
>CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein.
Length = 352
Score = 54.4 bits (125), Expect = 2e-07
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Frame = +1
Query: 79 KDIKISALALLKMVMHARSGG--TLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 252
K ++I L +LK++ H + G T V G+LLG V + + + + F P T +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP---QHTEDDAD 93
Query: 253 AQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVI 432
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 433 DPVRTISAGKVCLGAFR 483
DP++T + G + L A+R
Sbjct: 153 DPIKT-AQGSLSLKAYR 168
>BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 54.4 bits (125), Expect = 2e-07
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Frame = +1
Query: 79 KDIKISALALLKMVMHARSGG--TLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 252
K ++I L +LK++ H + G T V G+LLG V + + + + F P T +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP---QHTEDDAD 93
Query: 253 AQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVI 432
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 433 DPVRTISAGKVCLGAFR 483
DP++T + G + L A+R
Sbjct: 153 DPIKT-AQGSLSLKAYR 168
>BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 54.4 bits (125), Expect = 2e-07
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Frame = +1
Query: 79 KDIKISALALLKMVMHARSGG--TLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 252
K ++I L +LK++ H + G T V G+LLG V + + + + F P T +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP---QHTEDDAD 93
Query: 253 AQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVI 432
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 433 DPVRTISAGKVCLGAFR 483
DP++T + G + L A+R
Sbjct: 153 DPIKT-AQGSLSLKAYR 168
>AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 54.4 bits (125), Expect = 2e-07
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Frame = +1
Query: 79 KDIKISALALLKMVMHARSGG--TLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 252
K ++I L +LK++ H + G T V G+LLG V + + + + F P T +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP---QHTEDDAD 93
Query: 253 AQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVI 432
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 433 DPVRTISAGKVCLGAFR 483
DP++T + G + L A+R
Sbjct: 153 DPIKT-AQGSLSLKAYR 168
>AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 54.4 bits (125), Expect = 2e-07
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Frame = +1
Query: 79 KDIKISALALLKMVMHARSGG--TLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 252
K ++I L +LK++ H + G T V G+LLG V + + + + F P T +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP---QHTEDDAD 93
Query: 253 AQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVI 432
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 433 DPVRTISAGKVCLGAFR 483
DP++T + G + L A+R
Sbjct: 153 DPIKT-AQGSLSLKAYR 168
>AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 54.4 bits (125), Expect = 2e-07
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Frame = +1
Query: 79 KDIKISALALLKMVMHARSGG--TLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 252
K ++I L +LK++ H + G T V G+LLG V + + + + F P T +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVKDRLEITNCFPFP---QHTEDDAD 93
Query: 253 AQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVI 432
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 433 DPVRTISAGKVCLGAFR 483
DP++T + G + L A+R
Sbjct: 153 DPIKT-AQGSLSLKAYR 168
>X64643-1|CAA45917.1| 291|Homo sapiens C6.1A protein.
Length = 291
Score = 48.8 bits (111), Expect = 1e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 172 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 342
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 65 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 124
Query: 343 PGYGCWLSGIDVSTQMLNQNFHEPFVAIV 429
P W S +DV TQ + Q + FV ++
Sbjct: 125 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
>S72931-1|AAB30469.2| 363|Homo sapiens T-cell receptor alpha
chain-c6.1A fusion protein protein.
Length = 363
Score = 48.8 bits (111), Expect = 1e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 172 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 342
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 21 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 80
Query: 343 PGYGCWLSGIDVSTQMLNQNFHEPFVAIV 429
P W S +DV TQ + Q + FV ++
Sbjct: 81 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 109
>S68015-1|AAB29005.2| 321|Homo sapiens c6.1A protein.
Length = 321
Score = 48.8 bits (111), Expect = 1e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 172 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 342
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 70 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 129
Query: 343 PGYGCWLSGIDVSTQMLNQNFHEPFVAIV 429
P W S +DV TQ + Q + FV ++
Sbjct: 130 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 158
>BX470111-6|CAO03576.1| 247|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 247
Score = 48.8 bits (111), Expect = 1e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 172 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 342
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 65 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 124
Query: 343 PGYGCWLSGIDVSTQMLNQNFHEPFVAIV 429
P W S +DV TQ + Q + FV ++
Sbjct: 125 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
>BX470111-5|CAI41654.1| 291|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 291
Score = 48.8 bits (111), Expect = 1e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 172 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 342
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 65 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 124
Query: 343 PGYGCWLSGIDVSTQMLNQNFHEPFVAIV 429
P W S +DV TQ + Q + FV ++
Sbjct: 125 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
>BX470111-4|CAO03575.1| 292|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 292
Score = 48.8 bits (111), Expect = 1e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 172 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 342
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 66 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 125
Query: 343 PGYGCWLSGIDVSTQMLNQNFHEPFVAIV 429
P W S +DV TQ + Q + FV ++
Sbjct: 126 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 154
>BX470111-3|CAI41655.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 48.8 bits (111), Expect = 1e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 172 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 342
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 65 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 124
Query: 343 PGYGCWLSGIDVSTQMLNQNFHEPFVAIV 429
P W S +DV TQ + Q + FV ++
Sbjct: 125 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
>BX293995-4|CAO03602.1| 247|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 247
Score = 48.8 bits (111), Expect = 1e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 172 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 342
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 65 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 124
Query: 343 PGYGCWLSGIDVSTQMLNQNFHEPFVAIV 429
P W S +DV TQ + Q + FV ++
Sbjct: 125 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
>BX293995-3|CAH70538.1| 291|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 291
Score = 48.8 bits (111), Expect = 1e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 172 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 342
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 65 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 124
Query: 343 PGYGCWLSGIDVSTQMLNQNFHEPFVAIV 429
P W S +DV TQ + Q + FV ++
Sbjct: 125 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
>BX293995-2|CAO03601.1| 292|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 292
Score = 48.8 bits (111), Expect = 1e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 172 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 342
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 66 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 125
Query: 343 PGYGCWLSGIDVSTQMLNQNFHEPFVAIV 429
P W S +DV TQ + Q + FV ++
Sbjct: 126 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 154
>BX293995-1|CAH70537.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 48.8 bits (111), Expect = 1e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 172 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 342
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 65 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 124
Query: 343 PGYGCWLSGIDVSTQMLNQNFHEPFVAIV 429
P W S +DV TQ + Q + FV ++
Sbjct: 125 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
>BC006540-1|AAH06540.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 48.8 bits (111), Expect = 1e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 172 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 342
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 65 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 124
Query: 343 PGYGCWLSGIDVSTQMLNQNFHEPFVAIV 429
P W S +DV TQ + Q + FV ++
Sbjct: 125 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
>BC002999-1|AAH02999.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 48.8 bits (111), Expect = 1e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 172 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 342
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 65 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 124
Query: 343 PGYGCWLSGIDVSTQMLNQNFHEPFVAIV 429
P W S +DV TQ + Q + FV ++
Sbjct: 125 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
>AY438030-1|AAR30498.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex subunit 36 protein.
Length = 316
Score = 48.8 bits (111), Expect = 1e-05
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 172 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 342
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 65 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 124
Query: 343 PGYGCWLSGIDVSTQMLNQNFHEPFVAIV 429
P W S +DV TQ + Q + FV ++
Sbjct: 125 PHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
>BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein.
Length = 349
Score = 48.4 bits (110), Expect = 1e-05
Identities = 35/135 (25%), Positives = 62/135 (45%)
Frame = +1
Query: 79 KDIKISALALLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQ 258
K ++I L + K GT V G+LLG V + + + + F P T +A
Sbjct: 37 KQVQIDGLVVFKHYQE-EGQGTEVVQGVLLGLVVEDRLEITNCFPFP---QHTEDDADFD 92
Query: 259 AYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVIDP 438
+Y + + + V +GWY S YG +++ + +Q Q+ E V ++ DP
Sbjct: 93 EVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYDP 151
Query: 439 VRTISAGKVCLGAFR 483
++T + G + L A+R
Sbjct: 152 IKT-AQGSLSLKAYR 165
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 46.0 bits (104), Expect = 7e-05
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Frame = +1
Query: 85 IKISALALLKMVMH----ARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 252
+ + L LL +V H + G V+G+LLG + V +SFA+P + + +
Sbjct: 9 VVVHPLVLLSVVDHFNRIVKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 253 AQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVI 432
++Y+ K+V E +GWYH+ P L D++ L + + V ++I
Sbjct: 69 FLDHDYLENMYGMFKKVNARERIVGWYHTGPK----LHKNDIAINELMKRYCPNSVLVII 124
Query: 433 D 435
D
Sbjct: 125 D 125
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 46.0 bits (104), Expect = 7e-05
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Frame = +1
Query: 85 IKISALALLKMVMH----ARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 252
+ + L LL +V H + G V+G+LLG + V +SFA+P + + +
Sbjct: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 253 AQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVI 432
++Y+ K+V E +GWYH+ P L D++ L + + V ++I
Sbjct: 69 FLDHDYLENMYGMFKKVNARERIVGWYHTGPK----LHKNDIAINELMKRYCPNSVLVII 124
Query: 433 D 435
D
Sbjct: 125 D 125
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 46.0 bits (104), Expect = 7e-05
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Frame = +1
Query: 85 IKISALALLKMVMH----ARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQ 252
+ + L LL +V H + G V+G+LLG + V +SFA+P + + +
Sbjct: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 253 AQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVI 432
++Y+ K+V E +GWYH+ P L D++ L + + V ++I
Sbjct: 69 FLDHDYLENMYGMFKKVNARERIVGWYHTGPK----LHKNDIAINELMKRYCPNSVLVII 124
Query: 433 D 435
D
Sbjct: 125 D 125
>AL450024-1|CAH70737.1| 828|Homo sapiens myb-like, SWIRM and MPN
domains 1 protein.
Length = 828
Score = 45.2 bits (102), Expect = 1e-04
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Frame = +1
Query: 85 IKISALALLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAY 264
+K+++ ALL M +HA EV+GLL G+ +V A P T + +
Sbjct: 577 VKVASEALLIMDLHAHVS-MAEVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQCEMDPV 635
Query: 265 EYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHE----PFVAIVI 432
A A R + IGWYHSHP + S D+ TQ Q++ F+ +++
Sbjct: 636 SQTQASETLAV---RGFSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIV 692
Query: 433 DP 438
P
Sbjct: 693 SP 694
>AL035411-1|CAI21908.1| 828|Homo sapiens myb-like, SWIRM and MPN
domains 1 protein.
Length = 828
Score = 45.2 bits (102), Expect = 1e-04
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Frame = +1
Query: 85 IKISALALLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAY 264
+K+++ ALL M +HA EV+GLL G+ +V A P T + +
Sbjct: 577 VKVASEALLIMDLHAHVS-MAEVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQCEMDPV 635
Query: 265 EYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHE----PFVAIVI 432
A A R + IGWYHSHP + S D+ TQ Q++ F+ +++
Sbjct: 636 SQTQASETLAV---RGFSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIV 692
Query: 433 DP 438
P
Sbjct: 693 SP 694
>AB067502-1|BAB67808.1| 726|Homo sapiens KIAA1915 protein protein.
Length = 726
Score = 45.2 bits (102), Expect = 1e-04
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Frame = +1
Query: 85 IKISALALLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAY 264
+K+++ ALL M +HA EV+GLL G+ +V A P T + +
Sbjct: 475 VKVASEALLIMDLHAHVS-MAEVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQCEMDPV 533
Query: 265 EYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHE----PFVAIVI 432
A A R + IGWYHSHP + S D+ TQ Q++ F+ +++
Sbjct: 534 SQTQASETLAV---RGFSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIV 590
Query: 433 DP 438
P
Sbjct: 591 SP 592
>BX537912-1|CAD97896.1| 234|Homo sapiens hypothetical protein
protein.
Length = 234
Score = 37.1 bits (82), Expect = 0.033
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Frame = +1
Query: 148 EVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQVGRHENAIG 327
EV+GLL G+ +V A P T + + A A R + IG
Sbjct: 3 EVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQCEMDPVSQTQASETLAV---RGFSVIG 59
Query: 328 WYHSHPGYGCWLSGIDVSTQMLNQNFHE----PFVAIVIDP 438
WYHSHP + S D+ TQ Q++ F+ +++ P
Sbjct: 60 WYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVSP 100
>BX470111-1|CAO03573.1| 90|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 90
Score = 34.7 bits (76), Expect = 0.17
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +1
Query: 172 KVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEA---AKQVGRHENAIGWYHSH 342
KVDA ++ + S + + + + + A EA A+ GR +GWYHSH
Sbjct: 7 KVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSH 66
Query: 343 PGYGCWLSGI 372
P W S +
Sbjct: 67 PHITVWPSHV 76
>U73522-1|AAD05037.1| 424|Homo sapiens AMSH protein.
Length = 424
Score = 33.5 bits (73), Expect = 0.40
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 322 IGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVIDP 438
+GW H+HP +LS +D+ T Q VAIV P
Sbjct: 331 LGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP 369
>BC101469-1|AAI01470.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 33.5 bits (73), Expect = 0.40
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 322 IGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVIDP 438
+GW H+HP +LS +D+ T Q VAIV P
Sbjct: 331 LGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP 369
>BC101467-1|AAI01468.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 33.5 bits (73), Expect = 0.40
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 322 IGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVIDP 438
+GW H+HP +LS +D+ T Q VAIV P
Sbjct: 331 LGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP 369
>BC065574-1|AAH65574.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 33.5 bits (73), Expect = 0.40
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 322 IGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVIDP 438
+GW H+HP +LS +D+ T Q VAIV P
Sbjct: 331 LGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP 369
>BC007682-1|AAH07682.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 33.5 bits (73), Expect = 0.40
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 322 IGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVIDP 438
+GW H+HP +LS +D+ T Q VAIV P
Sbjct: 331 LGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP 369
>AC073046-1|AAX88908.1| 424|Homo sapiens unknown protein.
Length = 424
Score = 33.5 bits (73), Expect = 0.40
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 322 IGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVIDP 438
+GW H+HP +LS +D+ T Q VAIV P
Sbjct: 331 LGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP 369
>BC010846-1|AAH10846.2| 436|Homo sapiens STAM binding protein-like
1 protein.
Length = 436
Score = 32.7 bits (71), Expect = 0.70
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 322 IGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVIDP 438
+GW H+HP +LS +D+ T Q +AIV P
Sbjct: 343 LGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSP 381
>AL157394-5|CAI13863.1| 270|Homo sapiens novel Mov34/MPN/PAD-1
family domain containing protein (FLJ31524) protein.
Length = 270
Score = 32.7 bits (71), Expect = 0.70
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 322 IGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVIDP 438
+GW H+HP +LS +D+ T Q +AIV P
Sbjct: 177 LGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSP 215
>AL157394-4|CAI13862.1| 461|Homo sapiens novel Mov34/MPN/PAD-1
family domain containing protein (FLJ31524) protein.
Length = 461
Score = 32.7 bits (71), Expect = 0.70
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 322 IGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVIDP 438
+GW H+HP +LS +D+ T Q +AIV P
Sbjct: 343 LGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSP 381
>AL157394-3|CAI13861.1| 436|Homo sapiens novel Mov34/MPN/PAD-1
family domain containing protein (FLJ31524) protein.
Length = 436
Score = 32.7 bits (71), Expect = 0.70
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 322 IGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVIDP 438
+GW H+HP +LS +D+ T Q +AIV P
Sbjct: 343 LGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSP 381
>AB037794-1|BAA92611.1| 463|Homo sapiens KIAA1373 protein protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.70
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 322 IGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVIDP 438
+GW H+HP +LS +D+ T Q +AIV P
Sbjct: 345 LGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSP 383
>AB010120-1|BAC77766.1| 436|Homo sapiens AMSH-LP protein.
Length = 436
Score = 32.7 bits (71), Expect = 0.70
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 322 IGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVIDP 438
+GW H+HP +LS +D+ T Q +AIV P
Sbjct: 343 LGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSP 381
>BC032652-1|AAH32652.1| 471|Homo sapiens MPN domain containing
protein.
Length = 471
Score = 32.3 bits (70), Expect = 0.93
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +1
Query: 82 DIKISALALLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGT--ETRVNAQA 255
++ +S+ L + H+ + EV+G L G+ D N+ ++ A P + A
Sbjct: 271 NVAVSSNVLFLLDFHSHLTRS-EVVGYLGGRWDVNSQMLTVLRAFPCRSRLGDAETAAAI 329
Query: 256 QAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQM 390
+ Y + ++ R + +GWYHSHP S D+ QM
Sbjct: 330 EEEIYQSLFL-------RGLSLVGWYHSHPHSPALPSLQDIDAQM 367
>AC007292-1|AAD24592.1| 498|Homo sapiens R31167_1, partial protein
protein.
Length = 498
Score = 32.3 bits (70), Expect = 0.93
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +1
Query: 82 DIKISALALLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGT--ETRVNAQA 255
++ +S+ L + H+ + EV+G L G+ D N+ ++ A P + A
Sbjct: 268 NVAVSSNVLFLLDFHSHLTRS-EVVGYLGGRWDVNSQMLTVLRAFPCRSRLGDAETAAAI 326
Query: 256 QAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQM 390
+ Y + ++ R + +GWYHSHP S D+ QM
Sbjct: 327 EEEIYQSLFL-------RGLSLVGWYHSHPHSPALPSLQDIDAQM 364
>AK131343-1|BAD18499.1| 133|Homo sapiens protein ( Homo sapiens
cDNA FLJ16361 fis, clone THYMU2030462. ).
Length = 133
Score = 31.1 bits (67), Expect = 2.1
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -3
Query: 366 RKP-TSVPRVTVIPTNGILMTAHLFCCFNICCHIFVSLSLCIDTSFSTFYRESKRVHNNH 190
R P S+ + + T+ + + H+ C I HI+++ I T+ +R HN+H
Sbjct: 6 RSPRASIVALRKMITSFLALWWHVCVCICIYTHIYINTQTHIYTNTRIHFRPQFLAHNSH 65
Query: 189 SVC 181
S C
Sbjct: 66 SPC 68
>BC009382-1|AAH09382.1| 167|Homo sapiens chromosome 1 open reading
frame 76 protein.
Length = 167
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -3
Query: 339 TVIPTNGILMTAHLFCCFNICCHIFVSLSLCIDTSFSTFYRESKRVHN 196
TV+ T GIL T L C + C+ + C + E +R H+
Sbjct: 5 TVVITGGILATVILLCIIAVLCYCRLQYYCCKKSGTEVADEEEEREHD 52
>AY902195-1|AAX07133.1| 167|Homo sapiens neuroblastoma derived
secretory protein protein.
Length = 167
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -3
Query: 339 TVIPTNGILMTAHLFCCFNICCHIFVSLSLCIDTSFSTFYRESKRVHN 196
TV+ T GIL T L C + C+ + C + E +R H+
Sbjct: 5 TVVITGGILATVILLCIIAVLCYCRLQYYCCKKSGTEVADEEEEREHD 52
>AL359853-1|CAH70381.1| 167|Homo sapiens chromosome 1 open reading
frame 76 protein.
Length = 167
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -3
Query: 339 TVIPTNGILMTAHLFCCFNICCHIFVSLSLCIDTSFSTFYRESKRVHN 196
TV+ T GIL T L C + C+ + C + E +R H+
Sbjct: 5 TVVITGGILATVILLCIIAVLCYCRLQYYCCKKSGTEVADEEEEREHD 52
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,227,898
Number of Sequences: 237096
Number of extensions: 1652066
Number of successful extensions: 5265
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 5119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5259
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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