BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_P09
(488 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF132563-1|AAD27862.2| 345|Drosophila melanogaster LD14392p pro... 304 3e-83
AE014297-2216|AAF55321.1| 327|Drosophila melanogaster CG14884-P... 304 3e-83
AF129083-1|AAD28608.1| 327|Drosophila melanogaster COP9 signalo... 300 6e-82
AY070977-1|AAL48599.1| 308|Drosophila melanogaster RE07468p pro... 132 2e-31
AF145313-1|AAF08394.1| 308|Drosophila melanogaster 26S proteaso... 132 2e-31
AE014134-869|AAF52215.1| 308|Drosophila melanogaster CG18174-PA... 132 2e-31
AF195189-1|AAF27818.1| 229|Drosophila melanogaster yippee inter... 77 2e-14
AY089283-1|AAL90021.1| 338|Drosophila melanogaster AT07973p pro... 41 8e-04
AE013599-3862|AAF47199.1| 338|Drosophila melanogaster CG3416-PA... 41 8e-04
M64643-1|AAA28695.1| 338|Drosophila melanogaster Mov34 protein. 39 0.004
AY075309-1|AAL68176.1| 420|Drosophila melanogaster AT31826p pro... 36 0.030
AE014297-4599|AAF57051.1| 420|Drosophila melanogaster CG2224-PA... 36 0.030
AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-P... 31 0.64
AY075267-1|AAL68134.1| 347|Drosophila melanogaster AT29114p pro... 30 1.5
AE014296-1721|AAF50216.1| 347|Drosophila melanogaster CG14174-P... 30 1.5
BT003180-1|AAO24935.1| 533|Drosophila melanogaster RH07636p pro... 29 2.6
AY118442-1|AAM48471.1| 512|Drosophila melanogaster SD06874p pro... 29 2.6
AF062478-1|AAC16244.1| 533|Drosophila melanogaster pyruvate kin... 29 2.6
AF061507-1|AAC15808.1| 533|Drosophila melanogaster pyruvate kin... 29 2.6
AE014297-3134|AAN14373.1| 512|Drosophila melanogaster CG7070-PB... 29 2.6
AE014297-3133|AAF55979.3| 533|Drosophila melanogaster CG7070-PA... 29 2.6
BT021933-1|AAX51638.1| 853|Drosophila melanogaster SD01796p pro... 28 6.0
AF136492-1|AAD52845.1| 853|Drosophila melanogaster Pebble protein. 28 6.0
AE014296-1338|AAN12028.1| 1311|Drosophila melanogaster CG8114-PB... 28 6.0
AE014296-1337|AAF50508.2| 853|Drosophila melanogaster CG8114-PA... 28 6.0
AE014297-3874|AAF56527.1| 677|Drosophila melanogaster CG5959-PA... 28 7.9
>AF132563-1|AAD27862.2| 345|Drosophila melanogaster LD14392p
protein.
Length = 345
Score = 304 bits (747), Expect = 3e-83
Identities = 138/158 (87%), Positives = 151/158 (95%)
Frame = +1
Query: 13 YDKKQQQDILAAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLLLGKVDANTM 192
YD +QQ+ I+ AKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGL+LGKV+ NTM
Sbjct: 46 YDAEQQRQIIDAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLMLGKVEDNTM 105
Query: 193 IVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGI 372
IVMD+FALPVEGTETRVNAQAQAYEYMTAY+EAAK+VGR E+A+GWYHSHPGYGCWLSGI
Sbjct: 106 IVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVGRMEHAVGWYHSHPGYGCWLSGI 165
Query: 373 DVSTQMLNQNFHEPFVAIVIDPVRTISAGKVCLGAFRT 486
DVSTQMLNQ + EPFVAIV+DPVRT+SAGKVCLGAFRT
Sbjct: 166 DVSTQMLNQTYQEPFVAIVVDPVRTVSAGKVCLGAFRT 203
>AE014297-2216|AAF55321.1| 327|Drosophila melanogaster CG14884-PA
protein.
Length = 327
Score = 304 bits (747), Expect = 3e-83
Identities = 138/158 (87%), Positives = 151/158 (95%)
Frame = +1
Query: 13 YDKKQQQDILAAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLLLGKVDANTM 192
YD +QQ+ I+ AKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGL+LGKV+ NTM
Sbjct: 28 YDAEQQRQIIDAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLMLGKVEDNTM 87
Query: 193 IVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGI 372
IVMD+FALPVEGTETRVNAQAQAYEYMTAY+EAAK+VGR E+A+GWYHSHPGYGCWLSGI
Sbjct: 88 IVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVGRMEHAVGWYHSHPGYGCWLSGI 147
Query: 373 DVSTQMLNQNFHEPFVAIVIDPVRTISAGKVCLGAFRT 486
DVSTQMLNQ + EPFVAIV+DPVRT+SAGKVCLGAFRT
Sbjct: 148 DVSTQMLNQTYQEPFVAIVVDPVRTVSAGKVCLGAFRT 185
>AF129083-1|AAD28608.1| 327|Drosophila melanogaster COP9
signalosome subunit 5 CSN5 protein.
Length = 327
Score = 300 bits (737), Expect = 6e-82
Identities = 136/158 (86%), Positives = 151/158 (95%)
Frame = +1
Query: 13 YDKKQQQDILAAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLLLGKVDANTM 192
YD +QQ+ I+ AKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGL+LGKV+ NTM
Sbjct: 28 YDAEQQRQIIDAKPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLMLGKVEDNTM 87
Query: 193 IVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGI 372
IVMD+FALPVEGTETRVNAQAQAY+YMTAY+EAAK+VGR E+A+GWYHSHPGYGCWLSGI
Sbjct: 88 IVMDAFALPVEGTETRVNAQAQAYKYMTAYMEAAKKVGRMEHAVGWYHSHPGYGCWLSGI 147
Query: 373 DVSTQMLNQNFHEPFVAIVIDPVRTISAGKVCLGAFRT 486
+VSTQMLNQ + EPFVAIV+DPVRT+SAGKVCLGAFRT
Sbjct: 148 NVSTQMLNQTYQEPFVAIVVDPVRTVSAGKVCLGAFRT 185
>AY070977-1|AAL48599.1| 308|Drosophila melanogaster RE07468p
protein.
Length = 308
Score = 132 bits (319), Expect = 2e-31
Identities = 64/136 (47%), Positives = 92/136 (67%), Gaps = 1/136 (0%)
Frame = +1
Query: 79 KDIKISALALLKMVMHARSGGTLEVMGLLLGK-VDANTMIVMDSFALPVEGTETRVNAQA 255
+ + IS+LALLKM+ H R+G +EVMGL+LG+ VD T+ V+D FA+P GT V A
Sbjct: 27 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVFAMPQTGTGVSVEAVD 86
Query: 256 QAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVID 435
++ ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 87 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 144
Query: 436 PVRTISAGKVCLGAFR 483
P++++ GKV + AFR
Sbjct: 145 PIQSVK-GKVVIDAFR 159
>AF145313-1|AAF08394.1| 308|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p37B protein.
Length = 308
Score = 132 bits (319), Expect = 2e-31
Identities = 64/136 (47%), Positives = 92/136 (67%), Gaps = 1/136 (0%)
Frame = +1
Query: 79 KDIKISALALLKMVMHARSGGTLEVMGLLLGK-VDANTMIVMDSFALPVEGTETRVNAQA 255
+ + IS+LALLKM+ H R+G +EVMGL+LG+ VD T+ V+D FA+P GT V A
Sbjct: 27 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVFAMPQTGTGVSVEAVD 86
Query: 256 QAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVID 435
++ ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 87 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 144
Query: 436 PVRTISAGKVCLGAFR 483
P++++ GKV + AFR
Sbjct: 145 PIQSVK-GKVVIDAFR 159
>AE014134-869|AAF52215.1| 308|Drosophila melanogaster CG18174-PA
protein.
Length = 308
Score = 132 bits (319), Expect = 2e-31
Identities = 64/136 (47%), Positives = 92/136 (67%), Gaps = 1/136 (0%)
Frame = +1
Query: 79 KDIKISALALLKMVMHARSGGTLEVMGLLLGK-VDANTMIVMDSFALPVEGTETRVNAQA 255
+ + IS+LALLKM+ H R+G +EVMGL+LG+ VD T+ V+D FA+P GT V A
Sbjct: 27 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVFAMPQTGTGVSVEAVD 86
Query: 256 QAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVID 435
++ ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 87 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 144
Query: 436 PVRTISAGKVCLGAFR 483
P++++ GKV + AFR
Sbjct: 145 PIQSVK-GKVVIDAFR 159
>AF195189-1|AAF27818.1| 229|Drosophila melanogaster yippee
interacting protein 5 protein.
Length = 229
Score = 76.6 bits (180), Expect = 2e-14
Identities = 33/81 (40%), Positives = 50/81 (61%)
Frame = +1
Query: 241 VNAQAQAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFV 420
V+ +A + ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E V
Sbjct: 1 VSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAV 60
Query: 421 AIVIDPVRTISAGKVCLGAFR 483
A+ ++++ GKV + AFR
Sbjct: 61 AVXXYSIQSVK-GKVVIDAFR 80
>AY089283-1|AAL90021.1| 338|Drosophila melanogaster AT07973p
protein.
Length = 338
Score = 41.1 bits (92), Expect = 8e-04
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Frame = +1
Query: 91 ISALALLKMVMH----ARSGGTLEVMGLLLGKVDANTMI-VMDSFALPVEGTETRVNAQA 255
+ L LL +V H + G V+G+LLG + ++ V +SFA+P + + +
Sbjct: 13 VHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVWF 72
Query: 256 QAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVID 435
++Y+ K+V E +GWYH+ P L D++ L + + V ++ID
Sbjct: 73 LDHDYLENMYGMFKKVNARERVVGWYHTGPK----LHQNDIAINELVRRYCPNSVLVIID 128
>AE013599-3862|AAF47199.1| 338|Drosophila melanogaster CG3416-PA
protein.
Length = 338
Score = 41.1 bits (92), Expect = 8e-04
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Frame = +1
Query: 91 ISALALLKMVMH----ARSGGTLEVMGLLLGKVDANTMI-VMDSFALPVEGTETRVNAQA 255
+ L LL +V H + G V+G+LLG + ++ V +SFA+P + + +
Sbjct: 13 VHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVWF 72
Query: 256 QAYEYMTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVID 435
++Y+ K+V E +GWYH+ P L D++ L + + V ++ID
Sbjct: 73 LDHDYLENMYGMFKKVNARERVVGWYHTGPK----LHQNDIAINELVRRYCPNSVLVIID 128
>M64643-1|AAA28695.1| 338|Drosophila melanogaster Mov34 protein.
Length = 338
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +1
Query: 91 ISALALLKMVMH----ARSGGTLEVMGLLLGKVDANTMI-VMDSFALPVEGTETRVNAQA 255
+ L LL +V H + G V+G+LLG + ++ V ++FA+P + + +
Sbjct: 13 VHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNTFAVPFDVDDKDKSVWF 72
Query: 256 QAYEYMTAYIEAAKQVGRHENAIGWYHSHP 345
++Y+ K+V E +GWYH+ P
Sbjct: 73 LDHDYLENMYGMFKKVNARERVVGWYHTGP 102
>AY075309-1|AAL68176.1| 420|Drosophila melanogaster AT31826p
protein.
Length = 420
Score = 35.9 bits (79), Expect = 0.030
Identities = 27/110 (24%), Positives = 46/110 (41%)
Frame = +1
Query: 109 LKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIE 288
LK+ + A + +E G+L G + N + + +GT N +E ++
Sbjct: 261 LKLAL-ANTSKNIETCGVLAGHLSQNQLYITHIITPQQQGTPDSCNTM---HEEQIFDVQ 316
Query: 289 AAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVIDP 438
Q+ +GW H+HP +LS +D+ T Q +AIV P
Sbjct: 317 DQMQL----ITLGWIHTHPTQTAFLSSVDLHTHCSYQIMMPEALAIVCAP 362
>AE014297-4599|AAF57051.1| 420|Drosophila melanogaster CG2224-PA
protein.
Length = 420
Score = 35.9 bits (79), Expect = 0.030
Identities = 27/110 (24%), Positives = 46/110 (41%)
Frame = +1
Query: 109 LKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIE 288
LK+ + A + +E G+L G + N + + +GT N +E ++
Sbjct: 261 LKLAL-ANTSKNIETCGVLAGHLSQNQLYITHIITPQQQGTPDSCNTM---HEEQIFDVQ 316
Query: 289 AAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFHEPFVAIVIDP 438
Q+ +GW H+HP +LS +D+ T Q +AIV P
Sbjct: 317 DQMQL----ITLGWIHTHPTQTAFLSSVDLHTHCSYQIMMPEALAIVCAP 362
>AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-PA,
isoform A protein.
Length = 2190
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +1
Query: 106 LLKMVMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYM 273
LL+ +M R G T ++L K ++DSF+ ++ T V+ A YE M
Sbjct: 1330 LLESIMQLREGSTSTRARIVLNKWIETQKSLIDSFSQAIQNTNQNVDNIANVYEVM 1385
>AY075267-1|AAL68134.1| 347|Drosophila melanogaster AT29114p
protein.
Length = 347
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 322 IGWYHSHPGYG-CWLSGIDVSTQMLNQNFHEPFVAIVIDPVRTIS 453
+G+YH H C LS TQ+L NF F ++I + IS
Sbjct: 129 LGFYHLHERIRECCLSAAAYFTQLLRNNFFMDFTTLLIAAIAKIS 173
>AE014296-1721|AAF50216.1| 347|Drosophila melanogaster CG14174-PA
protein.
Length = 347
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 322 IGWYHSHPGYG-CWLSGIDVSTQMLNQNFHEPFVAIVIDPVRTIS 453
+G+YH H C LS TQ+L NF F ++I + IS
Sbjct: 129 LGFYHLHERIRECCLSAAAYFTQLLRNNFFMDFTTLLIAAIAKIS 173
>BT003180-1|AAO24935.1| 533|Drosophila melanogaster RH07636p
protein.
Length = 533
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 271 MTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQ 387
+T + + A+Q + + + PG G WL +DV Q
Sbjct: 455 VTRFAQTARQAHLYRGLVPLIYKEPGLGDWLKDVDVRVQ 493
>AY118442-1|AAM48471.1| 512|Drosophila melanogaster SD06874p
protein.
Length = 512
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 271 MTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQ 387
+T + + A+Q + + + PG G WL +DV Q
Sbjct: 434 VTRFAQTARQAHLYRGLVPLIYKEPGLGDWLKDVDVRVQ 472
>AF062478-1|AAC16244.1| 533|Drosophila melanogaster pyruvate kinase
protein.
Length = 533
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 271 MTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQ 387
+T + + A+Q + + + PG G WL +DV Q
Sbjct: 455 VTRFAQTARQAHLYRGLVPLIYKEPGLGDWLKDVDVRVQ 493
>AF061507-1|AAC15808.1| 533|Drosophila melanogaster pyruvate kinase
protein.
Length = 533
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 271 MTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQ 387
+T + + A+Q + + + PG G WL +DV Q
Sbjct: 455 VTRFAQTARQAHLYRGLVPLIYKEPGLGDWLKDVDVRVQ 493
>AE014297-3134|AAN14373.1| 512|Drosophila melanogaster CG7070-PB,
isoform B protein.
Length = 512
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 271 MTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQ 387
+T + + A+Q + + + PG G WL +DV Q
Sbjct: 434 VTRFAQTARQAHLYRGLVPLIYKEPGLGDWLKDVDVRVQ 472
>AE014297-3133|AAF55979.3| 533|Drosophila melanogaster CG7070-PA,
isoform A protein.
Length = 533
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 271 MTAYIEAAKQVGRHENAIGWYHSHPGYGCWLSGIDVSTQ 387
+T + + A+Q + + + PG G WL +DV Q
Sbjct: 455 VTRFAQTARQAHLYRGLVPLIYKEPGLGDWLKDVDVRVQ 493
>BT021933-1|AAX51638.1| 853|Drosophila melanogaster SD01796p
protein.
Length = 853
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +1
Query: 142 TLEVMGLLLGKV--DANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYI 285
TL L+G V DA+T+ +SF LP+ ++T ++ ++ ++ T Y+
Sbjct: 18 TLPTRICLVGGVGQDADTLQAAESFGLPIVTSDTGLDILGESSDWRTFYV 67
>AF136492-1|AAD52845.1| 853|Drosophila melanogaster Pebble protein.
Length = 853
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +1
Query: 142 TLEVMGLLLGKV--DANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYI 285
TL L+G V DA+T+ +SF LP+ ++T ++ ++ ++ T Y+
Sbjct: 18 TLPTRICLVGGVGQDADTLQAAESFGLPIVTSDTGLDILGESSDWRTFYV 67
>AE014296-1338|AAN12028.1| 1311|Drosophila melanogaster CG8114-PB,
isoform B protein.
Length = 1311
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +1
Query: 142 TLEVMGLLLGKV--DANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYI 285
TL L+G V DA+T+ +SF LP+ ++T ++ ++ ++ T Y+
Sbjct: 18 TLPTRICLVGGVGQDADTLQAAESFGLPIVTSDTGLDILGESSDWRTFYV 67
>AE014296-1337|AAF50508.2| 853|Drosophila melanogaster CG8114-PA,
isoform A protein.
Length = 853
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +1
Query: 142 TLEVMGLLLGKV--DANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYI 285
TL L+G V DA+T+ +SF LP+ ++T ++ ++ ++ T Y+
Sbjct: 18 TLPTRICLVGGVGQDADTLQAAESFGLPIVTSDTGLDILGESSDWRTFYV 67
>AE014297-3874|AAF56527.1| 677|Drosophila melanogaster CG5959-PA
protein.
Length = 677
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Frame = +1
Query: 268 YMTAYIEAAKQVGRHENAIG-----WYHSHPGY--GCWLSGIDVSTQMLNQNFH 408
++T Y +V RHE + WYHSH G+ G ++G V Q +N H
Sbjct: 207 FITQYPLQPGEVQRHEFKVDRSGSLWYHSHVGWQRGFGVAGAFVVRQTSQENQH 260
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,211,008
Number of Sequences: 53049
Number of extensions: 497999
Number of successful extensions: 1733
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1730
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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