Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_P08
         (399 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.21 
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   2.6  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   4.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   5.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.21
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 297 YYIICFLFYLLCVTFYFKYIFL 232
           YY +  LF+LLC+ +YF   F+
Sbjct: 134 YYFVVPLFFLLCI-YYFYCAFI 154



 Score = 24.2 bits (50), Expect = 0.48
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 52  VHLILYLPFLMLNLHLV 2
           VHL+ Y PF++  +H +
Sbjct: 81  VHLLFYCPFIIFTVHFL 97



 Score = 24.2 bits (50), Expect = 0.48
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 297 YYIICFLFYLLCVTFYFKYIFL 232
           YY  C L  LLC+ +YF   F+
Sbjct: 286 YYFYCALIILLCI-YYFCRAFI 306



 Score = 23.8 bits (49), Expect = 0.64
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 294 YIICFLFYLLCVTFYFKYIFL 232
           +II  + +LLC T+YF Y F+
Sbjct: 89  FIIFTVHFLLC-TYYFYYAFI 108



 Score = 22.6 bits (46), Expect = 1.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 297 YYIICFLFYLLCVTFYFKYIFL 232
           YY       LLCV +YF Y F+
Sbjct: 101 YYFYYAFIILLCV-YYFYYAFI 121



 Score = 20.2 bits (40), Expect = 7.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 52  VHLILYLPFLMLNLHLV 2
           +HL+    F+  N+HL+
Sbjct: 178 MHLLFCCAFIFFNMHLL 194


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 160 ELAQKKANETKEDVEGLRLRLSDLQKN 240
           +LA ++ N T+E    L+  L++ +KN
Sbjct: 83  DLAARRKNATRESTATLKAWLNEHKKN 109


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 2/18 (11%)
 Frame = -3

Query: 190 LFH--WLFSAPVLFPWLL 143
           LFH  W  S  +L PW L
Sbjct: 214 LFHRGWSMSGTMLVPWAL 231


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 115 IDAAKSDLIPIATET 159
           ++  +S+LIP  TET
Sbjct: 46  VERTRSELIPFLTET 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.305    0.120    0.291 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,737
Number of Sequences: 336
Number of extensions: 816
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.2 bits)