Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_P08
(399 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 32 0.038
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 31 0.066
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.15
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 30 0.15
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 29 0.27
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 28 0.46
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 0.46
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 27 1.1
SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces... 27 1.4
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 1.4
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 27 1.4
SPBC83.19c |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 1.4
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 26 2.5
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 26 2.5
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 3.3
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 25 5.7
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 25 5.7
SPAPB8E5.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 5.7
SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase |Schizosaccharo... 24 10.0
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 24 10.0
SPAC17A2.11 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 24 10.0
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 31.9 bits (69), Expect = 0.038
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = +1
Query: 211 RLRLSDLQKNILKIESDAEQVKQEANDVVLRAERAEQKARQLRQDFKRTNSSLAERVSQ 387
R L + N+L + + K + +V R +RA ++ ++++++F+R + L E Q
Sbjct: 99 RKELESAKNNLLNVYDSLKMQKASVSSMVNRKQRAAKEEQKIQEEFERQITDLLEEQQQ 157
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 31.1 bits (67), Expect = 0.066
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +1
Query: 85 ENAILKANSDIDAAKSDLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDA 264
E AI + D + +A +L ++ ++ D+E LRL+L LQ+ + +
Sbjct: 392 EKAIQERQDMSDFLNNFKADMAKSDKLLMQQQSQQTGDLETLRLQLQALQEELRVEREER 451
Query: 265 EQVKQEANDVVLRAER--AEQKA 327
+Q+ Q + D+V+ ++ EQK+
Sbjct: 452 QQLIQMSEDLVIAMDQLNLEQKS 474
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 29.9 bits (64), Expect = 0.15
Identities = 21/105 (20%), Positives = 45/105 (42%)
Frame = +1
Query: 85 ENAILKANSDIDAAKSDLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDA 264
+ + K + ++ +S L+ E + K N ++D L+ R DL+ +LK+E
Sbjct: 195 QTLVSKREAALEEFQSKLLIRENEINKRELKMNGKEDD---LKKREKDLENRLLKVEEHE 251
Query: 265 EQVKQEANDVVLRAERAEQKARQLRQDFKRTNSSLAERVSQTSNT 399
+ + + A + E + ++ + K E+ S+ S T
Sbjct: 252 KSLNERATKLSEANENFNNRFKEFEEREKSAIKQNKEQSSEGSKT 296
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 29.9 bits (64), Expect = 0.15
Identities = 15/86 (17%), Positives = 40/86 (46%)
Frame = +1
Query: 112 DIDAAKSDLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEAND 291
D+ ++++ ++ + +KK + K+D + + + +L+K+ L I +D + Q ++
Sbjct: 931 DLANKQTEISYLSDLSSTLEKKLSSIKKDEQTISSKYKELEKDYLNIMADYQHSSQHLSN 990
Query: 292 VVLRAERAEQKARQLRQDFKRTNSSL 369
+ R+L + R + L
Sbjct: 991 LEKAINEKNLNIRELNEKLMRLDDEL 1016
Score = 25.4 bits (53), Expect = 3.3
Identities = 11/54 (20%), Positives = 30/54 (55%)
Frame = +1
Query: 214 LRLSDLQKNILKIESDAEQVKQEANDVVLRAERAEQKARQLRQDFKRTNSSLAE 375
+R+ DL++ K + ++ ++E N ++ E +K ++RQD + ++ + +
Sbjct: 1727 IRVQDLEEREKKDQLLFQRYQKELNGFKVQLEEEREKNLRIRQDNRHMHAEIGD 1780
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 29.1 bits (62), Expect = 0.27
Identities = 19/80 (23%), Positives = 38/80 (47%)
Frame = +1
Query: 145 IATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAERAEQK 324
+A + L +K + +D+EG R + +L+ S+ ++ E ND L+ +R E
Sbjct: 68 VAFQKLLQEKTPLSSIQDLEGFREFMENLEHRYEMTVSEVRRLSHEVND--LQTDR-ENL 124
Query: 325 ARQLRQDFKRTNSSLAERVS 384
Q ++ NS ++ + S
Sbjct: 125 KHQFEDQIEKLNSEISNQNS 144
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 28.3 bits (60), Expect = 0.46
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +1
Query: 88 NAILKANSDIDAAKS-DLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDA 264
N LK + A K +L + + Q +A + + D + ++L+ + ++E +
Sbjct: 4 NLSLKRQDEKRADKEPNLYTLQGVIQYLQYEAFKNERDHNLWEIERAELKIRVAQLERER 63
Query: 265 EQVKQEANDVVLRAERAEQKARQLRQD 345
+++Q + RAE E+ R+LR+D
Sbjct: 64 AKLEQSLSFQQRRAEMLEKSLRELRKD 90
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 28.3 bits (60), Expect = 0.46
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Frame = +1
Query: 145 IATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQV-----KQEANDVVLRAE 309
++ +E K NE + D E R++DL+ +I +A Q + E ++ E
Sbjct: 478 VSDSSESFAHKNNEKRFDKEASG-RINDLRAEQQQIMLEARQKAIERRRNEEEELARSRE 536
Query: 310 RAEQKARQLRQDFKRTNSSLAERVSQTSN 396
RA +KA +++ + NSS ++SN
Sbjct: 537 RARKKAEEIKISSSKMNSSPTITNERSSN 565
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 27.1 bits (57), Expect = 1.1
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +1
Query: 151 TETELAQKKANETKEDVEGLR--LRLSDLQKNILKIESDAEQVKQEANDVVLRAERAEQK 324
T ++ QK +ET + + ++ RL DLQK + DAEQ K+ ++ ER +++
Sbjct: 73 TNYKILQKSNDETAQAMRKMQDQARLRDLQKIRQQKAEDAEQRKK----ILAEIERDKKR 128
Query: 325 ARQLRQDFKRTNSSLAERVSQTSN 396
R++ + A + Q N
Sbjct: 129 RAAERENKNSSVKETAAPIKQPKN 152
>SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 26.6 bits (56), Expect = 1.4
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +1
Query: 139 IPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESD 261
+P + ++++ ETKE E LRL L++ I+++++D
Sbjct: 42 LPRVRDAMKEEERSRETKEMQEREFLRLQQLRRAIIRLKND 82
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 26.6 bits (56), Expect = 1.4
Identities = 18/75 (24%), Positives = 35/75 (46%)
Frame = +1
Query: 115 IDAAKSDLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDV 294
+D+ L+P + + Q+ K D EG+ + L+ ++ + AEQ ++ + +
Sbjct: 1018 LDSEDKKLVPASPDKSAVQRGITALKRDAEGMS-HIWQLRLREMEFQLKAEQEGRKRDKL 1076
Query: 295 VLRAERAEQKARQLR 339
R ER + RQ R
Sbjct: 1077 GAR-ERLQDLIRQNR 1090
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 26.6 bits (56), Expect = 1.4
Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 172 KKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAERA-EQKARQLRQDF 348
+K + ++D+E S L K + ++S+ + +K +ND + + +K +++ Q
Sbjct: 883 EKISSLEKDLEAATKTASTLSKELKTVKSENDSLKSVSNDDQNKEKSVNNEKFKEVSQAL 942
Query: 349 KRTNSSLAER 378
N L R
Sbjct: 943 AEANEKLNAR 952
>SPBC83.19c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 119
Score = 26.6 bits (56), Expect = 1.4
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 238 FSANLRDVNVNLQHLLLFHW 179
+ AN + +NLQH+ L+H+
Sbjct: 21 WKANFESIRINLQHMHLYHY 40
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 25.8 bits (54), Expect = 2.5
Identities = 22/91 (24%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Frame = +1
Query: 106 NSDIDAAKSDLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQ----- 270
N+D++ +S I +++ +K +E +++E LSDL + I +AEQ
Sbjct: 59 NNDLEEQRSGSI----DSKDKEKPLDEKVKELENANKTLSDLVRRIQIQRDEAEQKAEIY 114
Query: 271 ------VKQEANDVVLRAERAEQKARQLRQD 345
KQE D+ R E++++ +L+++
Sbjct: 115 NRDALNTKQEHLDIKKRLEKSDETVCKLKEE 145
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 25.8 bits (54), Expect = 2.5
Identities = 22/88 (25%), Positives = 37/88 (42%)
Frame = +1
Query: 112 DIDAAKSDLIPIATETELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEAND 291
D + AK+ I + ET AQ + + + L L+ LQK + EQV E+
Sbjct: 548 DEELAKAKQISLDIETNKAQTE--QVNREYSILEATLNALQKQNKQKGEVLEQVVAESEA 605
Query: 292 VVLRAERAEQKARQLRQDFKRTNSSLAE 375
E + +QL+ + +LA+
Sbjct: 606 AKNMVESSNASIQQLKSEVADKEQTLAQ 633
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 25.4 bits (53), Expect = 3.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 157 TELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVK 276
T+L + ++ DVE R L D Q K+ES+ VK
Sbjct: 450 TDLRTAEPSQYVNDVEVARRALRDAQAEQSKVESEYNSVK 489
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 24.6 bits (51), Expect = 5.7
Identities = 21/99 (21%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Frame = +1
Query: 109 SDIDAAKSDLIPIATETELAQ--KKANETKEDVEGLRLRLSDLQKNIL-KIESDAEQVK- 276
+ + AA+ + + E E + + E KE+ EGLR L N+L K+++ +K
Sbjct: 351 TSLSAAEKEFLKDMQEKEQLKGLRLLPEDKEEYEGLRSEADKLNSNLLFKLQTLNRNIKV 410
Query: 277 --QEANDVVLRAERAEQKARQLRQDFKRTNSSLAERVSQ 387
Q + + E K + L + ++ A+ +++
Sbjct: 411 TSQSKDSLTSIVGDLESKIKSLHESVSSLDTERADLLAK 449
>SPBC428.07 |meu6||meiotic chromosome segregation protein
Meu6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 651
Score = 24.6 bits (51), Expect = 5.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 253 ESDAEQVKQEANDVVLRAERAEQKARQL 336
+SDA+ + Q AND + R +A Q R L
Sbjct: 170 DSDADSLFQSANDHLNRIAKATQDCRGL 197
>SPAPB8E5.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 103
Score = 24.6 bits (51), Expect = 5.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 294 YIICFLFYLLCVTFYFKYIFL 232
YI F + LC + FKYI L
Sbjct: 82 YIYFFFYSFLCSPYLFKYISL 102
>SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 23.8 bits (49), Expect = 10.0
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 148 ATETELAQKKANETKEDVEGLRLRLSDLQKNILK 249
A TE K + E +G LRL D +KNI+K
Sbjct: 513 AAFTEDGWFKTGDVGEIAKGNTLRLIDRKKNIVK 546
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 23.8 bits (49), Expect = 10.0
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 160 ELAQKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAERAEQKARQLR 339
EL+ K +ED + +++D Q+ +L+ +KQ+ ND A+ E++A R
Sbjct: 106 ELSFVKEMFREEDSAVEQGQMNDKQQLLLESSEPTPTIKQQFNDRKKNAQIREREALAKR 165
Query: 340 Q 342
+
Sbjct: 166 E 166
>SPAC17A2.11 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 217
Score = 23.8 bits (49), Expect = 10.0
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 208 NLQHLLLFHWLFSAPVLFPWL 146
++ HL+ FH+LF + + FP L
Sbjct: 172 HISHLISFHFLFFSFLSFPLL 192
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.305 0.120 0.291
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,060,673
Number of Sequences: 5004
Number of extensions: 14509
Number of successful extensions: 51
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 134126124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
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