Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_P06
         (482 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D57324 Cluster: PREDICTED: similar to programmed...    48   1e-04
UniRef50_Q8R9D3 Cluster: Sensory transduction histidine kinases;...    34   1.5  
UniRef50_A6DH10 Cluster: ABC transporter, ATPase subunit; n=1; L...    34   1.9  
UniRef50_Q8IUD2 Cluster: ELKS/RAB6-interacting/CAST family membe...    34   1.9  
UniRef50_UPI00006CD0F6 Cluster: Protein kinase domain containing...    33   3.4  
UniRef50_UPI0000499259 Cluster: hypothetical protein 388.t00006;...    33   4.5  
UniRef50_UPI0001552E3B Cluster: PREDICTED: hypothetical protein;...    32   5.9  
UniRef50_A0BR68 Cluster: Chromosome undetermined scaffold_122, w...    32   5.9  
UniRef50_A4MAJ3 Cluster: Amidophosphoribosyltransferase-like pro...    32   7.8  

>UniRef50_UPI0000D57324 Cluster: PREDICTED: similar to programmed
           cell death 7; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to programmed cell death 7 - Tribolium castaneum
          Length = 368

 Score = 47.6 bits (108), Expect = 1e-04
 Identities = 24/53 (45%), Positives = 35/53 (66%)
 Frame = +3

Query: 324 RKIDEHLQKIKDEVLRAKQEEETKVQADIILKEVLRKKHDXKKCITKLDALVK 482
           + I+  L+  KDEV RAK EE+ K  AD +L EV +KK + +K ++ + ALVK
Sbjct: 167 KSINTWLESKKDEVERAKMEEKMKRDADCVLYEVTKKKSEARKQLSLISALVK 219


>UniRef50_Q8R9D3 Cluster: Sensory transduction histidine kinases;
           n=4; Thermoanaerobacter|Rep: Sensory transduction
           histidine kinases - Thermoanaerobacter tengcongensis
          Length = 388

 Score = 34.3 bits (75), Expect = 1.5
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +3

Query: 318 TSRKIDEHLQKIKDEVLRAK-QEEETKVQADIILKEVLRKKHDXKKCITKLDALV 479
           + ++I E L+K KDE  + + Q EE KVQ   ++KEV   +   KKC  KL ALV
Sbjct: 27  SKQQIFEILEKAKDEARKLEAQLEELKVQVINVIKEVEMCEKKEKKCRLKL-ALV 80


>UniRef50_A6DH10 Cluster: ABC transporter, ATPase subunit; n=1;
           Lentisphaera araneosa HTCC2155|Rep: ABC transporter,
           ATPase subunit - Lentisphaera araneosa HTCC2155
          Length = 647

 Score = 33.9 bits (74), Expect = 1.9
 Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
 Frame = +3

Query: 333 DEHLQKIKDEVLRAKQEEETKVQ--ADIILKEVLRKKHDXKKCITK 464
           D ++ KIKDEV   +Q+E++KVQ  + +  KE  RK+ + +K + K
Sbjct: 524 DYYMSKIKDEVTLEEQQEKSKVQESSGLNRKEQRRKEAEERKSLKK 569


>UniRef50_Q8IUD2 Cluster: ELKS/RAB6-interacting/CAST family member
           1; n=34; Euteleostomi|Rep: ELKS/RAB6-interacting/CAST
           family member 1 - Homo sapiens (Human)
          Length = 1116

 Score = 33.9 bits (74), Expect = 1.9
 Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
 Frame = +3

Query: 321 SRKIDEHLQKIKDEVLRAKQEEETKVQADI-----ILKEVLRKKHDXKKCITKLDALVK 482
           S ++ + +Q ++ E+ R K +E +K QA++     ILKEV  +K+D  K I +L+  VK
Sbjct: 730 SPEMSDRIQHLEREITRYK-DESSKAQAEVDRLLEILKEVENEKNDKDKKIAELERQVK 787


>UniRef50_UPI00006CD0F6 Cluster: Protein kinase domain containing
           protein; n=1; Tetrahymena thermophila SB210|Rep: Protein
           kinase domain containing protein - Tetrahymena
           thermophila SB210
          Length = 1504

 Score = 33.1 bits (72), Expect = 3.4
 Identities = 14/44 (31%), Positives = 31/44 (70%)
 Frame = +3

Query: 327 KIDEHLQKIKDEVLRAKQEEETKVQADIILKEVLRKKHDXKKCI 458
           K+++ L+K K+E L+ K+EE+ K++ ++  KE  +K+ + +K +
Sbjct: 771 KLEQELKK-KEEALKLKEEEDRKLREELAKKENQQKQEEQQKLL 813


>UniRef50_UPI0000499259 Cluster: hypothetical protein 388.t00006; n=1;
            Entamoeba histolytica HM-1:IMSS|Rep: hypothetical protein
            388.t00006 - Entamoeba histolytica HM-1:IMSS
          Length = 1598

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 18/47 (38%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
 Frame = +3

Query: 321  SRKIDEHLQKIKDEVLRAKQEEETKVQADIILKEV-LRKKHDXKKCI 458
            +++I+  +QK+K+E+   K E+E K++  I  KE+ L+K+ D K+CI
Sbjct: 1178 NKEINIEIQKLKEELENEKNEKE-KMKDFIKQKEIELQKEKDEKECI 1223


>UniRef50_UPI0001552E3B Cluster: PREDICTED: hypothetical protein;
           n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
           Mus musculus
          Length = 230

 Score = 32.3 bits (70), Expect = 5.9
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +3

Query: 324 RKIDEHLQKIKDEVLRAKQEEETKVQADIILKEVLRKKHDXK-KCITK 464
           +K +    K K+E  R K+EEE +  AD+  KE  ++K + K K ITK
Sbjct: 175 KKSENGKDKEKEEKKRKKKEEEKRKSADLKTKETGKEKEEEKRKNITK 222


>UniRef50_A0BR68 Cluster: Chromosome undetermined scaffold_122,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_122,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 456

 Score = 32.3 bits (70), Expect = 5.9
 Identities = 13/42 (30%), Positives = 29/42 (69%)
 Frame = +3

Query: 318 TSRKIDEHLQKIKDEVLRAKQEEETKVQADIILKEVLRKKHD 443
           T+++ +++L+++K +  + KQE+  K+Q     KE+L++K D
Sbjct: 258 TAQETEQNLEEVKSKFQKLKQEKSIKIQQLHEQKEILKRKLD 299


>UniRef50_A4MAJ3 Cluster: Amidophosphoribosyltransferase-like
           protein; n=1; Petrotoga mobilis SJ95|Rep:
           Amidophosphoribosyltransferase-like protein - Petrotoga
           mobilis SJ95
          Length = 206

 Score = 31.9 bits (69), Expect = 7.8
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -3

Query: 159 YFSQFLPTSISSPHQK*KIFPHLIQHFYLSIAGFP 55
           Y   ++P++ SS H+K  +  HLI  ++  I GFP
Sbjct: 89  YTVSYVPSNFSSVHEKGFVPAHLIAQYFSDILGFP 123


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 296,797,473
Number of Sequences: 1657284
Number of extensions: 3821505
Number of successful extensions: 12349
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12295
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27710252790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)