Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_P06
         (482 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   4.0  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   5.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.1  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 378 QEEETKVQADIILK 419
           +E E ++QADIILK
Sbjct: 516 KESEFRLQADIILK 529


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 161 LIFLNFFQLQFPVLIRNRRYFL 96
           ++++ F  LQ+  L+RNR  +L
Sbjct: 414 IMYIAFIILQYAGLLRNRSEYL 435


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 13/52 (25%), Positives = 21/52 (40%)
 Frame = -1

Query: 176 VIYLKLIFLNFFQLQFPVLIRNRRYFLT*YSIFIFQLLDFHHNTFQLNEHLR 21
           +I ++   LN     F + I   +       IFI    D HH   ++ E L+
Sbjct: 487 LIKIRQYRLNHKPFNFHITINADKPMKAAIRIFIGPKYDSHHKLIEIPEDLK 538


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 13/52 (25%), Positives = 21/52 (40%)
 Frame = -1

Query: 176 VIYLKLIFLNFFQLQFPVLIRNRRYFLT*YSIFIFQLLDFHHNTFQLNEHLR 21
           +I ++   LN     F + I   +       IFI    D HH   ++ E L+
Sbjct: 487 LIKIRQYRLNHKPFNFHITINADKPMKAAIRIFIGPKYDSHHKLIEIPEDLK 538


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,071
Number of Sequences: 438
Number of extensions: 1402
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)