Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_P05
         (208 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   1.8  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   1.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   1.8  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    19   5.5  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    19   5.5  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    19   7.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    19   7.2  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    19   7.2  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    18   9.6  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 206 FFFFFTSKNI 177
           FF+FFT+ NI
Sbjct: 246 FFYFFTTGNI 255


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -1

Query: 121 VNAESIVLFIACDAV 77
           +N  ++ L ++CDAV
Sbjct: 260 INVGTVTLILSCDAV 274


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 206 FFFFFTSKNI 177
           FF+FFT+ NI
Sbjct: 242 FFYFFTTGNI 251


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 14  IASLKPREVP 43
           + S+KP+EVP
Sbjct: 324 VNSMKPKEVP 333


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 126 YSFLSLYSNG 155
           Y+FL +Y NG
Sbjct: 58  YAFLGVYPNG 67


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 141 LYSNGKPMC 167
           L+ NGKP C
Sbjct: 126 LFCNGKPDC 134


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 141 LYSNGKPMC 167
           L+ NGKP C
Sbjct: 133 LFCNGKPDC 141


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 165 CLIKYIFTC 191
           CL+  IFTC
Sbjct: 14  CLLAAIFTC 22


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 69  HLATASQAINKTMD 110
           HL   SQ  N T+D
Sbjct: 48  HLNAISQITNSTLD 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,605
Number of Sequences: 336
Number of extensions: 876
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 44
effective length of database: 107,801
effective search space used:  2587224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)