Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_P05
(208 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25899-1|AAA36583.1| 205|Homo sapiens ribosomal protein L10 pro... 31 0.51
BT019672-1|AAV38478.1| 204|Homo sapiens ribosomal protein L15 p... 31 0.51
BC071672-1|AAH71672.1| 204|Homo sapiens ribosomal protein L15 p... 31 0.51
BC070328-1|AAH70328.1| 204|Homo sapiens ribosomal protein L15 p... 31 0.51
BC068198-1|AAH68198.1| 204|Homo sapiens ribosomal protein L15 p... 31 0.51
BC030575-1|AAH30575.1| 219|Homo sapiens Similar to RIKEN cDNA 2... 31 0.51
AY347528-1|AAQ24859.1| 204|Homo sapiens ribosomal protein L15 p... 31 0.51
AL355137-1|CAI14965.1| 204|Homo sapiens ribosomal protein L15 p... 31 0.51
AF283772-1|AAG15591.1| 204|Homo sapiens protein ( Homo sapiens ... 31 0.51
AF279903-1|AAG44837.1| 204|Homo sapiens 60S ribosomal protein L... 31 0.51
AB061823-1|BAB79461.1| 204|Homo sapiens ribosomal protein L15 p... 31 0.51
BC014837-1|AAH14837.1| 204|Homo sapiens ribosomal protein L15 p... 28 4.8
>L25899-1|AAA36583.1| 205|Homo sapiens ribosomal protein L10
protein.
Length = 205
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 10 GHRFSQTKGGSRRAAW 57
GH+F T GGSRRAAW
Sbjct: 177 GHKFHHTIGGSRRAAW 192
>BT019672-1|AAV38478.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 10 GHRFSQTKGGSRRAAW 57
GH+F T GGSRRAAW
Sbjct: 177 GHKFHHTIGGSRRAAW 192
>BC071672-1|AAH71672.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 10 GHRFSQTKGGSRRAAW 57
GH+F T GGSRRAAW
Sbjct: 177 GHKFHHTIGGSRRAAW 192
>BC070328-1|AAH70328.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 10 GHRFSQTKGGSRRAAW 57
GH+F T GGSRRAAW
Sbjct: 177 GHKFHHTIGGSRRAAW 192
>BC068198-1|AAH68198.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 10 GHRFSQTKGGSRRAAW 57
GH+F T GGSRRAAW
Sbjct: 177 GHKFHHTIGGSRRAAW 192
>BC030575-1|AAH30575.1| 219|Homo sapiens Similar to RIKEN cDNA
2510008H07 gene protein.
Length = 219
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 10 GHRFSQTKGGSRRAAW 57
GH+F T GGSRRAAW
Sbjct: 192 GHKFHHTIGGSRRAAW 207
>AY347528-1|AAQ24859.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 10 GHRFSQTKGGSRRAAW 57
GH+F T GGSRRAAW
Sbjct: 177 GHKFHHTIGGSRRAAW 192
>AL355137-1|CAI14965.1| 204|Homo sapiens ribosomal protein L15
pseudogene 3 protein.
Length = 204
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 10 GHRFSQTKGGSRRAAW 57
GH+F T GGSRRAAW
Sbjct: 177 GHKFHHTIGGSRRAAW 192
>AF283772-1|AAG15591.1| 204|Homo sapiens protein ( Homo sapiens
clone TCBAP0781 mRNA sequence. ).
Length = 204
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 10 GHRFSQTKGGSRRAAW 57
GH+F T GGSRRAAW
Sbjct: 177 GHKFHHTIGGSRRAAW 192
>AF279903-1|AAG44837.1| 204|Homo sapiens 60S ribosomal protein L15
protein.
Length = 204
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 10 GHRFSQTKGGSRRAAW 57
GH+F T GGSRRAAW
Sbjct: 177 GHKFHHTIGGSRRAAW 192
>AB061823-1|BAB79461.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 10 GHRFSQTKGGSRRAAW 57
GH+F T GGSRRAAW
Sbjct: 177 GHKFHHTIGGSRRAAW 192
>BC014837-1|AAH14837.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 10 GHRFSQTKGGSRRAAW 57
GH+ T GGSRRAAW
Sbjct: 177 GHKSHHTIGGSRRAAW 192
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,688,235
Number of Sequences: 237096
Number of extensions: 477773
Number of successful extensions: 1063
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 76,859,062
effective HSP length: 47
effective length of database: 65,715,550
effective search space used: 1380026550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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