Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_P05
(208 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic in... 28 0.79
AC024757-4|AAK68429.2| 371|Caenorhabditis elegans Methionine am... 28 1.0
Z92782-10|CAE17812.1| 377|Caenorhabditis elegans Hypothetical p... 27 2.4
AC024755-7|AAO91688.1| 833|Caenorhabditis elegans Hypothetical ... 27 2.4
AC024755-6|AAF59639.1| 877|Caenorhabditis elegans Hypothetical ... 27 2.4
U88309-3|AAB42335.2| 333|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z74031-4|CAA98456.4| 291|Caenorhabditis elegans Hypothetical pr... 25 7.4
AC024859-26|AAK29977.2| 300|Caenorhabditis elegans Hypothetical... 25 7.4
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 25 9.7
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 25 9.7
AF067219-4|AAC17028.1| 82|Caenorhabditis elegans Hypothetical ... 25 9.7
AC024843-11|AAL00870.1| 177|Caenorhabditis elegans Hypothetical... 25 9.7
>AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic
initiation factor protein3.E protein.
Length = 432
Score = 28.3 bits (60), Expect = 0.79
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 142 KDRNE*KVNAESIVLFIACDAVARCCDVTRRRDGNL 35
K+R+E K +S+V + V D R RDGN+
Sbjct: 76 KERDELKSKVDSVVAILEIPEVKEMMDNNRERDGNV 111
>AC024757-4|AAK68429.2| 371|Caenorhabditis elegans Methionine
aminopeptidase protein 1 protein.
Length = 371
Score = 27.9 bits (59), Expect = 1.0
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 67 CDVTRRRDGNLPWF 26
C++ +RDGN PWF
Sbjct: 350 CEILTKRDGNRPWF 363
>Z92782-10|CAE17812.1| 377|Caenorhabditis elegans Hypothetical
protein F14F8.10 protein.
Length = 377
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -2
Query: 174 LLGTSAFHLNIKTE--TNRKSMRNPLSCLSLATQLQ 73
LL T++F N+ E + MR P+ CLS T L+
Sbjct: 88 LLRTASFVFNVSLEYYAEIRKMRTPVRCLSPTTYLE 123
>AC024755-7|AAO91688.1| 833|Caenorhabditis elegans Hypothetical
protein Y34B4A.4b protein.
Length = 833
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 42 PSRRLVTSQHLATASQAINKTMDSALTFYSFLSLYSNGKPMCLIKYI 182
P RL S+++ A + MD+A ++ ++ +L KP C + YI
Sbjct: 737 PLARLEWSKNIKDALKEHTAVMDTAQSYKNYRALLQTAKPPC-VPYI 782
>AC024755-6|AAF59639.1| 877|Caenorhabditis elegans Hypothetical
protein Y34B4A.4a protein.
Length = 877
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 42 PSRRLVTSQHLATASQAINKTMDSALTFYSFLSLYSNGKPMCLIKYI 182
P RL S+++ A + MD+A ++ ++ +L KP C + YI
Sbjct: 737 PLARLEWSKNIKDALKEHTAVMDTAQSYKNYRALLQTAKPPC-VPYI 782
>U88309-3|AAB42335.2| 333|Caenorhabditis elegans Hypothetical
protein T23B3.6 protein.
Length = 333
Score = 25.4 bits (53), Expect = 5.6
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 41 PVAPPGYVATPCNCVASDKQDNGFRIDFLFVSVFIFKWKADVPN-KIYFYL 190
PV+P G+ A P N F I FL VSVFI W+A P K FY+
Sbjct: 14 PVSP-GWPAIPSGSYGEIVL-NVF-IVFLNVSVFIVLWRAIKPEYKACFYI 61
>Z74031-4|CAA98456.4| 291|Caenorhabditis elegans Hypothetical
protein F32D8.4 protein.
Length = 291
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 77 NCVASDKQDNGFRIDFLFVSVFIFKWKADVPNKIYF 184
+CV +N +ID L S F +K + PN +F
Sbjct: 85 DCVKDHSDENSIKIDVLVNSTF-YKKRLASPNDAFF 119
>AC024859-26|AAK29977.2| 300|Caenorhabditis elegans Hypothetical
protein Y71H2AM.2 protein.
Length = 300
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 2/15 (13%)
Frame = +2
Query: 47 APPG--YVATPCNCV 85
APPG YV PCNC+
Sbjct: 93 APPGKKYVRCPCNCL 107
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 44 VAPPGYVATPCNCVASDKQDNGF 112
V PPGY+ T C A + +G+
Sbjct: 635 VCPPGYLGTSCEDCAPGYERSGY 657
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 44 VAPPGYVATPCNCVASDKQDNGF 112
V PPGY+ T C A + +G+
Sbjct: 635 VCPPGYLGTSCEDCAPGYERSGY 657
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 44 VAPPGYVATPCNCVASDKQDNGF 112
V PPGY+ T C A + +G+
Sbjct: 635 VCPPGYLGTSCEDCAPGYERSGY 657
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 44 VAPPGYVATPCNCVASDKQDNGF 112
V PPGY+ T C A + +G+
Sbjct: 635 VCPPGYLGTSCEDCAPGYERSGY 657
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
protein ZC101.2b protein.
Length = 1160
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 44 VAPPGYVATPCNCVASDKQDNGF 112
V PPGY+ T C A + +G+
Sbjct: 635 VCPPGYLGTSCEDCAPGYERSGY 657
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 44 VAPPGYVATPCNCVASDKQDNGF 112
V PPGY+ T C A + +G+
Sbjct: 635 VCPPGYLGTSCEDCAPGYERSGY 657
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 44 VAPPGYVATPCNCVASDKQDNGF 112
V PPGY+ T C A + +G+
Sbjct: 635 VCPPGYLGTSCEDCAPGYERSGY 657
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 44 VAPPGYVATPCNCVASDKQDNGF 112
V PPGY+ T C A + +G+
Sbjct: 635 VCPPGYLGTSCEDCAPGYERSGY 657
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 44 VAPPGYVATPCNCVASDKQDNGF 112
V PPGY+ T C A + +G+
Sbjct: 635 VCPPGYLGTSCEDCAPGYERSGY 657
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 44 VAPPGYVATPCNCVASDKQDNGF 112
V PPGY+ T C A + +G+
Sbjct: 634 VCPPGYLGTSCEDCAPGYERSGY 656
>AF067219-4|AAC17028.1| 82|Caenorhabditis elegans Hypothetical
protein R12E2.7 protein.
Length = 82
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 17 ASLKPREVPVAPPGYVATP 73
A P PVAPP Y A P
Sbjct: 48 AGAGPAAYPVAPPSYAAPP 66
>AC024843-11|AAL00870.1| 177|Caenorhabditis elegans Hypothetical
protein Y61A9LA.11 protein.
Length = 177
Score = 24.6 bits (51), Expect = 9.7
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 30 QGRFPSRRLVTSQHLATASQAINKTMDSALTFYSFLSLYSNGKPMCLIKYIFTC 191
QGRF L+T+ L+ ++ T DS L + S+ N + + L + + C
Sbjct: 42 QGRFLIAGLITAPFLSRLETHLSGTTDSELKNRCY-SIRCNAETLSLDRAVLVC 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,762,025
Number of Sequences: 27780
Number of extensions: 79630
Number of successful extensions: 274
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 12,740,198
effective HSP length: 48
effective length of database: 11,406,758
effective search space used: 228135160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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