Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_P01
(509 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5SRN1 Cluster: Cell division cycle 40 homolog; n=27; E... 118 6e-26
UniRef50_Q2TA76 Cluster: CDC40 protein; n=6; Eutheria|Rep: CDC40... 118 6e-26
UniRef50_O60508 Cluster: Pre-mRNA-processing factor 17; n=13; Fu... 118 6e-26
UniRef50_Q4P561 Cluster: Putative uncharacterized protein; n=1; ... 83 5e-15
UniRef50_O44729 Cluster: Yeast prp (Splicing factor) related pro... 79 8e-14
UniRef50_Q9XIJ3 Cluster: T10O24.21; n=5; Viridiplantae|Rep: T10O... 63 4e-09
UniRef50_A6RDT8 Cluster: Putative uncharacterized protein; n=2; ... 60 2e-08
UniRef50_Q84MU4 Cluster: Putative pre-mRNA splicing factor; n=2;... 56 4e-07
UniRef50_Q54HF5 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_Q2UPN7 Cluster: MRNA splicing factor; n=7; Eurotiomycet... 51 1e-05
UniRef50_A2QPE3 Cluster: Contig An07c0320, complete genome; n=22... 50 2e-05
UniRef50_O43071 Cluster: Pre-mRNA-processing factor 17; n=1; Sch... 48 9e-05
UniRef50_A5A8P6 Cluster: Putative uncharacterized protein; n=3; ... 39 0.057
UniRef50_A0CTQ2 Cluster: Chromosome undetermined scaffold_27, wh... 36 0.53
UniRef50_Q751I3 Cluster: AGL277Wp; n=3; Saccharomycetaceae|Rep: ... 36 0.71
UniRef50_UPI00006CB709 Cluster: hypothetical protein TTHERM_0049... 34 1.6
UniRef50_A5B1S9 Cluster: Putative uncharacterized protein; n=2; ... 33 3.8
UniRef50_Q23KB7 Cluster: Cyclic nucleotide-binding domain contai... 32 6.6
UniRef50_Q22DC3 Cluster: Putative uncharacterized protein; n=1; ... 32 6.6
UniRef50_Q4N1R4 Cluster: Putative uncharacterized protein; n=2; ... 32 8.7
UniRef50_Q6ZUQ8 Cluster: CDNA FLJ43440 fis, clone OCBBF2030517; ... 32 8.7
>UniRef50_Q5SRN1 Cluster: Cell division cycle 40 homolog; n=27;
Eumetazoa|Rep: Cell division cycle 40 homolog - Homo
sapiens (Human)
Length = 539
Score = 118 bits (285), Expect = 6e-26
Identities = 58/109 (53%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
Frame = +1
Query: 157 LMHLKPVDPNLSIAKSMQICSTPVVMPTNNDDTRV-LIPANQELMHNPKYEELFAPTFGP 333
LMHL P+ + ++ + S P V + +T V L PA +E+ +NP YE +FAP FGP
Sbjct: 37 LMHLTK-SPSSKPSLAVAVDSAPEVAVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGP 95
Query: 334 DNPFQTQQMKANRNMLAGYVEKAHISDFQFENQRRTFTSYGYAIDPSTE 480
+NPF+TQQM A RNML+GY E AHI+DF FE QRRTF +YGYA+DPS +
Sbjct: 96 ENPFRTQQMAAPRNMLSGYAEPAHINDFMFEQQRRTFATYGYALDPSLD 144
>UniRef50_Q2TA76 Cluster: CDC40 protein; n=6; Eutheria|Rep: CDC40
protein - Homo sapiens (Human)
Length = 280
Score = 118 bits (285), Expect = 6e-26
Identities = 58/109 (53%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
Frame = +1
Query: 157 LMHLKPVDPNLSIAKSMQICSTPVVMPTNNDDTRV-LIPANQELMHNPKYEELFAPTFGP 333
LMHL P+ + ++ + S P V + +T V L PA +E+ +NP YE +FAP FGP
Sbjct: 37 LMHLTK-SPSSKPSLAVAVDSAPEVAVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGP 95
Query: 334 DNPFQTQQMKANRNMLAGYVEKAHISDFQFENQRRTFTSYGYAIDPSTE 480
+NPF+TQQM A RNML+GY E AHI+DF FE QRRTF +YGYA+DPS +
Sbjct: 96 ENPFRTQQMAAPRNMLSGYAEPAHINDFMFEQQRRTFATYGYALDPSLD 144
>UniRef50_O60508 Cluster: Pre-mRNA-processing factor 17; n=13;
Fungi/Metazoa group|Rep: Pre-mRNA-processing factor 17 -
Homo sapiens (Human)
Length = 579
Score = 118 bits (285), Expect = 6e-26
Identities = 58/109 (53%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
Frame = +1
Query: 157 LMHLKPVDPNLSIAKSMQICSTPVVMPTNNDDTRV-LIPANQELMHNPKYEELFAPTFGP 333
LMHL P+ + ++ + S P V + +T V L PA +E+ +NP YE +FAP FGP
Sbjct: 37 LMHLTK-SPSSKPSLAVAVDSAPEVAVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGP 95
Query: 334 DNPFQTQQMKANRNMLAGYVEKAHISDFQFENQRRTFTSYGYAIDPSTE 480
+NPF+TQQM A RNML+GY E AHI+DF FE QRRTF +YGYA+DPS +
Sbjct: 96 ENPFRTQQMAAPRNMLSGYAEPAHINDFMFEQQRRTFATYGYALDPSLD 144
>UniRef50_Q4P561 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 669
Score = 82.6 bits (195), Expect = 5e-15
Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Frame = +1
Query: 190 SIAKSMQICSTPVVMPTNNDDTRVLIPANQELMH-NPKYEELFAPTFGPDNPFQTQQMKA 366
S++ S + P V+ ++ +LI MH N Y ++ AP GP+NPF T+ A
Sbjct: 102 SVSASDAVTLAPKVIYNSSASEALLIRPGDSTMHVNIPYADMTAPQLGPENPFATRTAGA 161
Query: 367 NRNMLAGYVEKAHISDFQFENQRRTFTSYGYAIDPS-TETETGSG 498
+N L G+VE A +SDF F NQ+RTF YGYA DPS + +G G
Sbjct: 162 QQNTLTGHVESAAVSDFDFRNQQRTFHVYGYARDPSLLHSASGEG 206
>UniRef50_O44729 Cluster: Yeast prp (Splicing factor) related
protein 17; n=3; Chromadorea|Rep: Yeast prp (Splicing
factor) related protein 17 - Caenorhabditis elegans
Length = 567
Score = 78.6 bits (185), Expect = 8e-14
Identities = 31/77 (40%), Positives = 53/77 (68%)
Frame = +1
Query: 259 VLIPANQELMHNPKYEELFAPTFGPDNPFQTQQMKANRNMLAGYVEKAHISDFQFENQRR 438
++ P +E+ NPK+++LF P GP N F+++Q ++ +N L G+VE AH+++F F Q R
Sbjct: 54 IVDPKTKEIKSNPKFDQLFKPESGPVNHFKSEQQRSQKNTLTGFVEPAHLNEFHFNRQIR 113
Query: 439 TFTSYGYAIDPSTETET 489
+F + GYA +P+ E+ T
Sbjct: 114 SFDTLGYAQNPTAESGT 130
>UniRef50_Q9XIJ3 Cluster: T10O24.21; n=5; Viridiplantae|Rep:
T10O24.21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 62.9 bits (146), Expect = 4e-09
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +1
Query: 229 VMPTNNDDTRVLIPANQELMHNPKYEELFAPTFGPDNPFQTQQM-KANRNMLAGYVEKAH 405
V N ++ + P + +NP +++L+AP FGP +P+ + + RN G VE A
Sbjct: 44 VANVNQSKSKPIDPTQHVVFYNPTHDQLWAPMFGPAHPYAKDGIAQGMRNHKLGSVEDAS 103
Query: 406 ISDFQFENQRRTFTSYGYAIDPSTETETGSGDA 504
I F FE Q TF GYA DPS G +A
Sbjct: 104 IGSFGFEEQYHTFHKCGYAADPSGMNYVGDVEA 136
>UniRef50_A6RDT8 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Ajellomyces capsulatus NAm1
Length = 583
Score = 60.5 bits (140), Expect = 2e-08
Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Frame = +1
Query: 136 QNSNESLLMHLKPVDPNLSIAKSMQICSTPVVMPTNNDDTRVLIPANQE--LMHNPKYEE 309
++S++ + PV + + I + P V ++ ++++ + + L +N Y++
Sbjct: 10 ESSSDDEVKQNVPVKSTPAPVPASGIVAAPDVSIEDSSRLQLMLAKSTDTALTYNATYDD 69
Query: 310 LFAPTFGPDNPFQTQQ---MKANRNMLAGYVEKAHISDFQFENQRRTFTSYGYAIDPS 474
L PT GP+NPF++ +N+L G+ E+ IS+ F +Q RTF ++GY DPS
Sbjct: 70 LSRPTLGPENPFRSAHGGNALKRKNVLTGHAEETLISEATFNSQHRTFQAFGYTQDPS 127
>UniRef50_Q84MU4 Cluster: Putative pre-mRNA splicing factor; n=2;
Oryza sativa (japonica cultivar-group)|Rep: Putative
pre-mRNA splicing factor - Oryza sativa subsp. japonica
(Rice)
Length = 573
Score = 56.4 bits (130), Expect = 4e-07
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 253 TRVLIPANQELMHNPKYEELFAPTFGPDNPFQT-QQMKANRNMLAGYVEKAHISDFQFEN 429
+R L P+ + NP ++L+AP GP +P NRN G+VE A + F F+
Sbjct: 55 SRPLDPSLHLVPFNPTADQLWAPVLGPQHPHAPISSASGNRNHKLGHVEDAAVLPFLFDE 114
Query: 430 QRRTFTSYGYAIDPS 474
Q TF +GYA DPS
Sbjct: 115 QYNTFHRFGYAADPS 129
>UniRef50_Q54HF5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 595
Score = 54.0 bits (124), Expect = 2e-06
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = +1
Query: 268 PANQELMHNPKYEELFAPTFGPDNPFQTQQMKAN---RNMLAGYVEKAHISDFQFENQRR 438
P ++ L++NP E L FGP PF + K + +N G VE HI+D+ F Q
Sbjct: 83 PNDKILLYNPTVESLEGDIFGPKKPFSSNDKKLDPKFKNHTNGLVEDYHINDYAFNQQVL 142
Query: 439 TFTSYGYAIDPSTETE 486
+F + GY+ +P+ TE
Sbjct: 143 SFKTNGYSENPNNSTE 158
>UniRef50_Q2UPN7 Cluster: MRNA splicing factor; n=7;
Eurotiomycetidae|Rep: MRNA splicing factor - Aspergillus
oryzae
Length = 582
Score = 51.2 bits (117), Expect = 1e-05
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Frame = +1
Query: 190 SIAKSMQICSTPVVMPTNNDDTRVLIP--ANQELMHNPKYEELFAPTFGPDNPFQTQQMK 363
++ + +I + P V + ++++ ++Q L +N Y++L P GP NPF+
Sbjct: 24 TVPTATKIVAAPEVNTEDQAHMQMMLANTSSQALTYNATYDDLSRPNQGPANPFKPDGPA 83
Query: 364 ---ANRNMLAGYVEKAHISDFQFENQRRTFTSYGYAIDP 471
+N+ GY E+A IS F Q RTF S GY +P
Sbjct: 84 NGLKRKNVPTGYAEEAAISAATFATQHRTFQSLGYTRNP 122
>UniRef50_A2QPE3 Cluster: Contig An07c0320, complete genome; n=22;
Pezizomycotina|Rep: Contig An07c0320, complete genome -
Aspergillus niger
Length = 583
Score = 50.4 bits (115), Expect = 2e-05
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Frame = +1
Query: 169 KPVDPNLSIAKSMQICSTPVVMPTNNDDTRVLIP--ANQELMHNPKYEELFAPTFGPDNP 342
KP ++ + I + P V + ++++ ++ L +N Y++L P+ GP NP
Sbjct: 18 KPTQVQPTVPSATTIVAAPEVNTEDQAHMQMMLANTSSTALTYNATYDDLSRPSQGPANP 77
Query: 343 FQTQQMK---ANRNMLAGYVEKAHISDFQFENQRRTFTSYGYAIDP 471
F+ +N+ G+ E+A IS+ F Q RTF S GY +P
Sbjct: 78 FKPAGPANGLKRKNVPTGFAEEAAISEATFAAQHRTFQSLGYTRNP 123
>UniRef50_O43071 Cluster: Pre-mRNA-processing factor 17; n=1;
Schizosaccharomyces pombe|Rep: Pre-mRNA-processing
factor 17 - Schizosaccharomyces pombe (Fission yeast)
Length = 558
Score = 48.4 bits (110), Expect = 9e-05
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +1
Query: 223 PVVMPTNNDDTRVLIPAN-QELMHNPKYEELFAPTFGPDNPFQTQQMKANRNMLAGYVEK 399
P V+ DD V N +EL N E+ P GP NPF T++ + +N + GY E+
Sbjct: 32 PAVVDNVKDDLIVSKGGNSRELARNVPVNEMVQPALGPANPFVTKEQDSIKNSITGYAER 91
Query: 400 AHISDFQF--ENQRRTFTSYG 456
++ +F F E T YG
Sbjct: 92 EYVPNFVFNQEYYANTHAIYG 112
>UniRef50_A5A8P6 Cluster: Putative uncharacterized protein; n=3;
Eukaryota|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 274
Score = 39.1 bits (87), Expect = 0.057
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +1
Query: 259 VLIPANQELMHNPKYEELFAPTFGPDNPFQTQQMKANRNMLAGYVEKA 402
++ P +E+ NPK+++LF P GP N F+++Q R G V+KA
Sbjct: 52 IVDPKTKEIKSNPKFDQLFKPESGPVNHFKSEQFGTTR--FVGDVKKA 97
>UniRef50_A0CTQ2 Cluster: Chromosome undetermined scaffold_27, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_27,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 540
Score = 35.9 bits (79), Expect = 0.53
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 370 RNMLAGYVEKAHISDFQFENQRRTFTSYGYAIDPS 474
+N L G VE + +D FE Q F YG+A+DP+
Sbjct: 54 KNHLTGNVESIYYNDAVFEEQFHKFNVYGFAVDPN 88
>UniRef50_Q751I3 Cluster: AGL277Wp; n=3; Saccharomycetaceae|Rep:
AGL277Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 671
Score = 35.5 bits (78), Expect = 0.71
Identities = 25/67 (37%), Positives = 34/67 (50%)
Frame = -1
Query: 380 NMFLLAFICCV*NGLSGPNVGANSSSYFGLCINSWFAGISTLVSSLFVGITTGVEQICML 201
N F+ AFIC NV A SS + + + F+ I++L SSL GI V I
Sbjct: 412 NAFVAAFICAFMQQFCAINVIAYYSSV--IFLQAGFSEIASLCSSLGFGIINTVFAIPAY 469
Query: 200 FAMDKFG 180
F +D+FG
Sbjct: 470 FMIDRFG 476
>UniRef50_UPI00006CB709 Cluster: hypothetical protein
TTHERM_00494570; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00494570 - Tetrahymena
thermophila SB210
Length = 609
Score = 34.3 bits (75), Expect = 1.6
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 337 NPFQTQQMKANRNMLAGYVEKAHISDFQFENQRRTFTSYGYAIDPSTE 480
N ++Q K N N L G VE ++ F F+ Q F + GYA DP +
Sbjct: 60 NSGNSEQNKKN-NHLTGKVESYNMHSFSFDQQFYNFKNRGYAYDPQLD 106
>UniRef50_A5B1S9 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 159
Score = 33.1 bits (72), Expect = 3.8
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +1
Query: 139 NSNESLLMHLKPVDPNLS--IAKSMQICSTPVVMPTNN 246
N N+++L HL P D NLS +++Q S+P ++P N+
Sbjct: 30 NRNQNILRHLLPTDSNLSETTHQTLQTSSSPSLLPKND 67
>UniRef50_Q23KB7 Cluster: Cyclic nucleotide-binding domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Cyclic
nucleotide-binding domain containing protein -
Tetrahymena thermophila SB210
Length = 1610
Score = 32.3 bits (70), Expect = 6.6
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +1
Query: 178 DPNLSIAKSMQICSTPVVMPTNNDDTRVLIPANQELMHNPKYEELFAPTFGPDNPFQTQQ 357
+P+L+ K Q+ S+P ++P N+ + I NQ + P+ + APT G N +
Sbjct: 1237 NPSLTNLKLDQLKSSPCILPEYNNQNQNQIAQNQLIQQQPQQQFYNAPT-GTLNQVNLFR 1295
Query: 358 MKANRNM 378
+ NM
Sbjct: 1296 QNSRNNM 1302
>UniRef50_Q22DC3 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 727
Score = 32.3 bits (70), Expect = 6.6
Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +1
Query: 241 NNDDTRVLIPANQELMHNPKYEELFAPTFGPDNPFQTQQMKANRNML--AGYVEKAHISD 414
NN + + P N+EL PK +++ +F P+ Q+ + + + +K +
Sbjct: 187 NNSNQGISTPINEELKVKPKTKQMTRTSFQAQVPYYQQKAEEKKEFIKQKNKEKKIQYKN 246
Query: 415 F--QFENQRRTFTSYGY 459
F E++++TFT + +
Sbjct: 247 FIESLESRKQTFTKFSF 263
>UniRef50_Q4N1R4 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 3928
Score = 31.9 bits (69), Expect = 8.7
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -2
Query: 142 CFVLLLLNRCPHRLPN-YFHSSLYLTLYCLFVYKIFKTSTKLPN 14
C + L+N+ +RLPN Y H S++ TL C F ++F T L N
Sbjct: 2878 CDEIHLINKWRNRLPNKYDHPSIWNTLLC-FRTQVFSTVKNLTN 2920
>UniRef50_Q6ZUQ8 Cluster: CDNA FLJ43440 fis, clone OCBBF2030517;
n=2; Homo sapiens|Rep: CDNA FLJ43440 fis, clone
OCBBF2030517 - Homo sapiens (Human)
Length = 154
Score = 31.9 bits (69), Expect = 8.7
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 148 HYCFVLLLLNRCPHRLPNYFHSSLYLTLYCLFVYKIFK 35
H V LL CP R +FHSS ++L CLF + K
Sbjct: 46 HLVDVTLLHGLCPWRCEIFFHSSPAISLLCLFCLGLAK 83
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,579,562
Number of Sequences: 1657284
Number of extensions: 8885242
Number of successful extensions: 22585
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22576
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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