Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_P01
         (509 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   2.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   2.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.7  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   6.4  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   6.4  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = -1

Query: 299 FGLCINSWFAGISTLVSSLFV 237
           + LC+ SW  GI  +++  ++
Sbjct: 179 YSLCVISWAVGIGIMLAQYYL 199


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = -1

Query: 299 FGLCINSWFAGISTLVSSLFV 237
           + LC+ SW  GI  +++  ++
Sbjct: 179 YSLCVISWAVGIGIMLAQYYL 199


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 306 FILWVVH*FLVCWY*YSSIIII 241
           FI++ VH  L  +Y Y + II+
Sbjct: 89  FIIFTVHFLLCTYYFYYAFIIL 110


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 118 RCPHRLPNYFHSSLYL 71
           R PHR+ +YF  + Y+
Sbjct: 21  RFPHRIHSYFMVAFYV 36


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 118 RCPHRLPNYFHSSLYL 71
           R PHR+ +YF  + Y+
Sbjct: 21  RFPHRIHSYFMVAFYV 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,854
Number of Sequences: 336
Number of extensions: 2607
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)