Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_O24
         (415 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.        25   1.4  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   4.4  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   4.4  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    23   5.8  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   5.8  

>DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.
          Length = 434

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 90  LVFAMSEKSTPLLAVLQLLRKYNL-KGTEEILRKEASLGDVEYENLNLPEVELAS 251
           ++  M  K  PL+ V++ L  Y + +  +E+ R      D E E ++LP+ E  S
Sbjct: 281 MLLIMPRKGVPLVEVIRKLAAYGIDRVFDELDRSLVDFDDDEVE-VHLPKFEFNS 334


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 23/84 (27%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
 Frame = +3

Query: 105  SEKSTPLL-AVLQLLRKYNLKGT-EEILRKE-ASLGDVEYENLNLPEVELASILTAHHTE 275
            S++ T L+ A ++ +    L+G+ ++I ++E A+ G   YE  +  E++ + +   HH +
Sbjct: 934  SKRQTILMQAKMESIEIPLLQGSMDDIGQQEYAADGGSAYERESRIEIDYSKL--EHHLK 991

Query: 276  --SDPYSYEFAYDNLKKFIENSLD 341
              SDP   + + D+L K +++ LD
Sbjct: 992  NLSDPDQIKKSGDSLAKELQSKLD 1015


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 241  STSGKFKFSYSTSPKLASFRSIS 173
            S+SG      S SPK+ SFR I+
Sbjct: 1459 SSSGMAILDMSASPKMYSFRRIA 1481


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 249 SILTAHHTESDPYSYEFAYD 308
           S+  AH+ ++  Y+Y+ AY+
Sbjct: 519 SVQYAHNVDASRYAYKLAYE 538


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 249 SILTAHHTESDPYSYEFAYD 308
           S+  AH+ ++  Y+Y+ AY+
Sbjct: 519 SVQYAHNVDASRYAYKLAYE 538


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 421,617
Number of Sequences: 2352
Number of extensions: 7779
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33777477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)