Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_O24
(415 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical p... 35 0.020
Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical p... 35 0.020
AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical... 30 0.58
Z72505-7|CAA96614.1| 333|Caenorhabditis elegans Hypothetical pr... 30 0.76
Z70780-16|CAA94829.1| 333|Caenorhabditis elegans Hypothetical p... 30 0.76
AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical ... 29 1.8
U14635-5|AAN63442.1| 464|Caenorhabditis elegans Hypothetical pr... 27 5.4
U14635-4|AAL02446.1| 459|Caenorhabditis elegans Hypothetical pr... 27 5.4
U14635-3|AAN63441.1| 491|Caenorhabditis elegans Hypothetical pr... 27 5.4
U14635-2|AAC46656.2| 522|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical pr... 27 7.1
U41508-3|AAN39664.1| 317|Caenorhabditis elegans Set (trithorax/... 27 7.1
U41508-2|AAN39665.2| 552|Caenorhabditis elegans Set (trithorax/... 27 7.1
AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein. 27 7.1
Z77133-1|CAB00866.1| 87|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z19155-4|CAA79560.3| 844|Caenorhabditis elegans Hypothetical pr... 26 9.4
>Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 35.1 bits (77), Expect = 0.020
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +3
Query: 123 LLAVLQLLRKYNLKGTEEILRKEAS-LGDVEYENLNLPEVELASILTAHHTESDPYSYEF 299
L ++ LR+ L TEE+L +EA + VE N LP E S+
Sbjct: 40 LQMIIGYLRRNGLTETEELLTREAGPVLRVEGSN-GLPPEEAISV--------------- 83
Query: 300 AYDNLKKFIENSLDIYKHELSTLLYPVFVHMYLILI 407
+D + + D+ + E S LL+P+F H Y+ LI
Sbjct: 84 EFDTFVQHANDCTDVVQAEFSQLLFPIFAHSYIALI 119
>Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 35.1 bits (77), Expect = 0.020
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +3
Query: 123 LLAVLQLLRKYNLKGTEEILRKEAS-LGDVEYENLNLPEVELASILTAHHTESDPYSYEF 299
L ++ LR+ L TEE+L +EA + VE N LP E S+
Sbjct: 40 LQMIIGYLRRNGLTETEELLTREAGPVLRVEGSN-GLPPEEAISV--------------- 83
Query: 300 AYDNLKKFIENSLDIYKHELSTLLYPVFVHMYLILI 407
+D + + D+ + E S LL+P+F H Y+ LI
Sbjct: 84 EFDTFVQHANDCTDVVQAEFSQLLFPIFAHSYIALI 119
>AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical
protein F57B10.4 protein.
Length = 691
Score = 30.3 bits (65), Expect = 0.58
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 135 LQLLRKYNLKGTEEILRKEASLGDVEYEN 221
LQ L K + +E I+ EASL D++Y+N
Sbjct: 281 LQTLEKSEAENSESIINLEASLEDIKYQN 309
>Z72505-7|CAA96614.1| 333|Caenorhabditis elegans Hypothetical
protein C50C10.1 protein.
Length = 333
Score = 29.9 bits (64), Expect = 0.76
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 376 GYKRVDNSCLYMSKEFSMNFFKLS*ANS*LYGSLSVW*AVSM 251
G+K +D Y + E++ NF + A + +YG S W V M
Sbjct: 5 GFKAIDFQPEYFNFEYTFNFLTIFAAVTAIYGIFSFWITVKM 46
>Z70780-16|CAA94829.1| 333|Caenorhabditis elegans Hypothetical
protein C50C10.1 protein.
Length = 333
Score = 29.9 bits (64), Expect = 0.76
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 376 GYKRVDNSCLYMSKEFSMNFFKLS*ANS*LYGSLSVW*AVSM 251
G+K +D Y + E++ NF + A + +YG S W V M
Sbjct: 5 GFKAIDFQPEYFNFEYTFNFLTIFAAVTAIYGIFSFWITVKM 46
>AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical
protein C33E10.6 protein.
Length = 1014
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 291 YEFAYDNLKKFIENSLDIYKHELSTLLYPV 380
YEF YD +KK N +D+ + + +Y V
Sbjct: 851 YEFHYDVMKKHFGNKIDLCYQDTDSFIYEV 880
>U14635-5|AAN63442.1| 464|Caenorhabditis elegans Hypothetical
protein C27H5.2d protein.
Length = 464
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +3
Query: 87 KLVFAMSEKSTPLLAVLQLLRKYNLKGTEEILRKEASLGDVEYENLNLPEVELASILTAH 266
+++ A ++ T + L++L K NLK TE L + ++ D + + L + L + +
Sbjct: 189 QIIDANRQEITKMNETLRILEK-NLKETETNLSEANAMVDCKQQELEMVSEALKRLEESR 247
Query: 267 HTESD 281
HT S+
Sbjct: 248 HTISE 252
>U14635-4|AAL02446.1| 459|Caenorhabditis elegans Hypothetical
protein C27H5.2b protein.
Length = 459
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +3
Query: 87 KLVFAMSEKSTPLLAVLQLLRKYNLKGTEEILRKEASLGDVEYENLNLPEVELASILTAH 266
+++ A ++ T + L++L K NLK TE L + ++ D + + L + L + +
Sbjct: 189 QIIDANRQEITKMNETLRILEK-NLKETETNLSEANAMVDCKQQELEMVSEALKRLEESR 247
Query: 267 HTESD 281
HT S+
Sbjct: 248 HTISE 252
>U14635-3|AAN63441.1| 491|Caenorhabditis elegans Hypothetical
protein C27H5.2c protein.
Length = 491
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +3
Query: 87 KLVFAMSEKSTPLLAVLQLLRKYNLKGTEEILRKEASLGDVEYENLNLPEVELASILTAH 266
+++ A ++ T + L++L K NLK TE L + ++ D + + L + L + +
Sbjct: 189 QIIDANRQEITKMNETLRILEK-NLKETETNLSEANAMVDCKQQELEMVSEALKRLEESR 247
Query: 267 HTESD 281
HT S+
Sbjct: 248 HTISE 252
>U14635-2|AAC46656.2| 522|Caenorhabditis elegans Hypothetical
protein C27H5.2a protein.
Length = 522
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +3
Query: 87 KLVFAMSEKSTPLLAVLQLLRKYNLKGTEEILRKEASLGDVEYENLNLPEVELASILTAH 266
+++ A ++ T + L++L K NLK TE L + ++ D + + L + L + +
Sbjct: 189 QIIDANRQEITKMNETLRILEK-NLKETETNLSEANAMVDCKQQELEMVSEALKRLEESR 247
Query: 267 HTESD 281
HT S+
Sbjct: 248 HTISE 252
>Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical
protein H06O01.1 protein.
Length = 488
Score = 26.6 bits (56), Expect = 7.1
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 132 VLQLLRKYNLKGTEEILRKEASLGDVEYENLNLPEVELASILTAHHTESD-PYSYEFAYD 308
VL++ + Y K + KE ++E L + I+ E P EF+ D
Sbjct: 275 VLKVAQNYKRKVQFAVSNKEEFSSEIETNGLGERKDSDKPIVAILTNEGKYPMDQEFSVD 334
Query: 309 NLKKFIENSL 338
NL++F++ L
Sbjct: 335 NLQQFVDEVL 344
>U41508-3|AAN39664.1| 317|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 20,
isoform a protein.
Length = 317
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 252 ILTAHHTESDPYSYEFAYDNLKKFIENSLDIYKHELSTLLYPVFVH 389
++++ ++ D Y+ + YD K + +D K + S YP FV+
Sbjct: 124 VVSSSISDEDTYALDVVYDTDKYQLAAIIDTNKKQKSVKKYPPFVN 169
>U41508-2|AAN39665.2| 552|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 20,
isoform b protein.
Length = 552
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 252 ILTAHHTESDPYSYEFAYDNLKKFIENSLDIYKHELSTLLYPVFVH 389
++++ ++ D Y+ + YD K + +D K + S YP FV+
Sbjct: 359 VVSSSISDEDTYALDVVYDTDKYQLAAIIDTNKKQKSVKKYPPFVN 404
>AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein.
Length = 488
Score = 26.6 bits (56), Expect = 7.1
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 132 VLQLLRKYNLKGTEEILRKEASLGDVEYENLNLPEVELASILTAHHTESD-PYSYEFAYD 308
VL++ + Y K + KE ++E L + I+ E P EF+ D
Sbjct: 275 VLKVAQNYKRKVQFAVSNKEEFSSEIETNGLGERKDSDKPIVAILTNEGKYPMDQEFSVD 334
Query: 309 NLKKFIENSL 338
NL++F++ L
Sbjct: 335 NLQQFVDEVL 344
>Z77133-1|CAB00866.1| 87|Caenorhabditis elegans Hypothetical
protein K03A11.2 protein.
Length = 87
Score = 26.2 bits (55), Expect = 9.4
Identities = 20/75 (26%), Positives = 31/75 (41%)
Frame = +3
Query: 138 QLLRKYNLKGTEEILRKEASLGDVEYENLNLPEVELASILTAHHTESDPYSYEFAYDNLK 317
Q+ KYNLK EE R++ G + N PE L A E + Y+ K
Sbjct: 11 QIRNKYNLKKKEE-AREQEIAGRIA-GNRKTPEQVALETLNAEEDEGIMSAINDTYEKAK 68
Query: 318 KFIENSLDIYKHELS 362
+ ++ K+ +S
Sbjct: 69 STVASACSTMKNVVS 83
>Z19155-4|CAA79560.3| 844|Caenorhabditis elegans Hypothetical
protein F54G8.5 protein.
Length = 844
Score = 26.2 bits (55), Expect = 9.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 90 LVFAMSEKSTPLLAVLQLLRKYNLKGTEEILRKEASLGDVEYE 218
+ FA+ E +TP A+ LLR NLK + ++ GDV E
Sbjct: 153 IAFAL-EDTTPEFAIQFLLRYPNLKFGDFVIDNAMVFGDVRIE 194
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,359,262
Number of Sequences: 27780
Number of extensions: 181061
Number of successful extensions: 556
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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