Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_O20
(490 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70308-6|CAA94344.1| 207|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z70307-5|CAA94331.1| 209|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z70307-2|CAA94335.1| 208|Caenorhabditis elegans Hypothetical pr... 45 3e-05
Z70308-3|CAA94350.1| 207|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z70307-4|CAA94330.1| 209|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z73896-3|CAA98060.1| 208|Caenorhabditis elegans Hypothetical pr... 40 0.001
AC006655-2|AAF39876.1| 208|Caenorhabditis elegans Hypothetical ... 37 0.007
Z70308-2|CAA94349.1| 212|Caenorhabditis elegans Hypothetical pr... 37 0.009
AF016661-5|AAB66052.1| 207|Caenorhabditis elegans Hypothetical ... 33 0.084
Z70308-5|CAA94348.1| 207|Caenorhabditis elegans Hypothetical pr... 32 0.26
U42839-2|AAC69015.1| 425|Caenorhabditis elegans Venom-allergen-... 31 0.45
U42839-1|AAM54195.1| 424|Caenorhabditis elegans Venom-allergen-... 31 0.45
AF112356-1|AAD27559.1| 425|Caenorhabditis elegans venom allerge... 31 0.45
AJ276028-1|CAC81655.1| 816|Caenorhabditis elegans TRP homlogous... 30 1.0
AF040654-5|AAN65302.2| 816|Caenorhabditis elegans Trp (transien... 30 1.0
AF040654-4|AAN65303.2| 886|Caenorhabditis elegans Trp (transien... 30 1.0
Z68108-4|CAA92136.1| 246|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z77659-1|CAB01164.1| 401|Caenorhabditis elegans Hypothetical pr... 28 4.2
AF025453-4|ABC48262.1| 905|Caenorhabditis elegans Hypothetical ... 27 9.7
AF025453-3|AAM98053.2| 828|Caenorhabditis elegans Hypothetical ... 27 9.7
>Z70308-6|CAA94344.1| 207|Caenorhabditis elegans Hypothetical
protein F49E11.10 protein.
Length = 207
Score = 46.4 bits (105), Expect = 1e-05
Identities = 38/121 (31%), Positives = 48/121 (39%), Gaps = 6/121 (4%)
Frame = +2
Query: 146 VNGHNYRRQLLAKGQV----SGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 313
+N HN R +AKG + T + M WD + +N+ N T
Sbjct: 27 INAHNTLRSKIAKGTYVAKGTQKSPGTNLLKMKWDSAVAASA-------QNYANGCPTGH 79
Query: 314 SGRFQTGENLYWYSTTDSTYKLNV--DNAMESWFNEYNDYKYAHLKQSDFDKSKXKIGHY 487
SG GENLYWY T+ S LN A SW E+ DY + D IGH
Sbjct: 80 SGDAGLGENLYWYWTSGSLGDLNQYGSAASASWEKEFQDYGWKS-NLMTIDLFNTGIGHA 138
Query: 488 T 490
T
Sbjct: 139 T 139
>Z70307-5|CAA94331.1| 209|Caenorhabditis elegans Hypothetical
protein C39E9.5 protein.
Length = 209
Score = 46.0 bits (104), Expect = 1e-05
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Frame = +2
Query: 50 VRALLILAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKGQV----SGHPAATE 217
++ L+LA+V C+G H++ + KQ VN HN R +AKG+ + +AT
Sbjct: 1 MQTALVLALV-CVG-AHAQ--FSEGGKQ--SMVNAHNAVRSSIAKGEYVAKGTKKDSATN 54
Query: 218 MKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYW-YSTTDST-YKLNVDN 391
M M WD L H+PDK+ GENL+W YS++ T V +
Sbjct: 55 MLKMKWDNSLAQSAQNYANGCPMQHSPDKSY-------GENLFWAYSSSPITDLDKYVQS 107
Query: 392 AMESWFNEY 418
A+++W +E+
Sbjct: 108 AVDTWVSEF 116
>Z70307-2|CAA94335.1| 208|Caenorhabditis elegans Hypothetical
protein C39E9.2 protein.
Length = 208
Score = 44.8 bits (101), Expect = 3e-05
Identities = 39/123 (31%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Frame = +2
Query: 146 VNGHNYRRQLLAKGQV----SGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 313
+N HN R +AKG + PAA++M M WD + + N T
Sbjct: 28 LNVHNTLRSRIAKGTYVAKGTAKPAASDMLKMKWDATVAASAQA-------YANKCPTGH 80
Query: 314 SGRFQTGENLYWYSTTDSTYKLNVDNAMES--WFNEYNDYKYAH--LKQSDFDKSKXKIG 481
SG GENLYWY T+ + ++ A S W E+ DY ++ L S F+ IG
Sbjct: 81 SGAAGLGENLYWYWTSATITNIDQFGATGSAAWEKEFQDYGWSSNTLSMSLFNTG---IG 137
Query: 482 HYT 490
H T
Sbjct: 138 HAT 140
>Z70308-3|CAA94350.1| 207|Caenorhabditis elegans Hypothetical
protein F49E11.6 protein.
Length = 207
Score = 41.5 bits (93), Expect = 3e-04
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Frame = +2
Query: 65 ILAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKGQV----SGHPAATEMKYMV 232
+L +V CI V S+ S Q + V+ HN R +AKG + + + M+ +
Sbjct: 4 LLLLVCCIAGVFSQFT---STGQ-QAIVDAHNKLRSSIAKGTYVAKGTTQKSGSNMRKIK 59
Query: 233 WDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNV--DNAMESW 406
WD + +N+ N T S GENLYWY T+ + L+ A SW
Sbjct: 60 WDATVATSA-------QNYANTCPTGHSQGSGYGENLYWYWTSGTIGNLDTFGPAASSSW 112
Query: 407 FNEYNDYKYAHLKQSDFDKSKXKIGHYT 490
+E+ Y + D + IGH T
Sbjct: 113 ESEFQQYGWTS-NTLDMNTFNTGIGHAT 139
>Z70307-4|CAA94330.1| 209|Caenorhabditis elegans Hypothetical
protein C39E9.4 protein.
Length = 209
Score = 39.9 bits (89), Expect = 0.001
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Frame = +2
Query: 146 VNGHNYRRQLLAKG--QVSG--HPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 313
V+ HN R LA G ++G PA + ++ M WD L + + N T
Sbjct: 29 VDLHNSFRSKLATGTYSINGTLKPAGSNIRKMSWDSTLATSA-------QTYANTCPTGF 81
Query: 314 SGRFQTGENLYWYSTTDSTYKLNV--DNAMESWFNEYNDYKYA--HLKQSDFD 460
S TGENLYW +T+ + L++ A SW E+ Y +A + Q FD
Sbjct: 82 SNTQGTGENLYWRTTSANISGLDIYGGAASVSWEQEFQKYGWATNYFSQELFD 134
>Z73896-3|CAA98060.1| 208|Caenorhabditis elegans Hypothetical
protein F09E8.5 protein.
Length = 208
Score = 39.5 bits (88), Expect = 0.001
Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 8/123 (6%)
Frame = +2
Query: 146 VNGHNYRRQLLAKGQVSGHP----AATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 313
+N HN R +AKG AA++M M W L ++ + N T
Sbjct: 28 LNVHNTLRSRIAKGTYVARGTVKHAASDMLKMKWLRSLATS-------SQIYANRCPTGH 80
Query: 314 SGRFQTGENLYWYSTTDSTYKLNVDNAMES--WFNEYNDYKYAH--LKQSDFDKSKXKIG 481
S GENLYWY T+ + ++ AM S W E+ DY ++ L S F+ +G
Sbjct: 81 SNMIGVGENLYWYWTSGTITNIDQFGAMASAAWEKEFQDYGWSSNTLTMSLFNSG---VG 137
Query: 482 HYT 490
H T
Sbjct: 138 HAT 140
>AC006655-2|AAF39876.1| 208|Caenorhabditis elegans Hypothetical
protein H10D18.4 protein.
Length = 208
Score = 37.1 bits (82), Expect = 0.007
Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 7/127 (5%)
Frame = +2
Query: 68 LAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKGQV----SGHPAATEMKYMVW 235
+ +C+ + + S V+ HN R +A+G + P+A+ M+ +VW
Sbjct: 1 MKFALCLLAIFGCATAQFSSTAQGQIVDAHNKLRSAIAQGSYVAAGTQEPSASNMRKIVW 60
Query: 236 DEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYW---YSTTDSTYKLNVDNAMESW 406
DE + Q PD G+ GENLYW S S K V A SW
Sbjct: 61 DETV-----AAAAQEYAEGCPDDHSGT---SYGENLYWSWSSSAPSSLDKFGV-AASNSW 111
Query: 407 FNEYNDY 427
+E+ Y
Sbjct: 112 ESEFQKY 118
>Z70308-2|CAA94349.1| 212|Caenorhabditis elegans Hypothetical
protein F49E11.5 protein.
Length = 212
Score = 36.7 bits (81), Expect = 0.009
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Frame = +2
Query: 155 HNYRRQLLAKGQ-VSGH---PAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGR 322
HNY R +A G+ V+G+ P+A+ M ++WD L H+ + R
Sbjct: 34 HNYLRSQIALGKYVAGNSTKPSASNMMKLIWDTTLETTAQDYSTGCPTGHS------ASR 87
Query: 323 FQTGENLYWYST---TDSTYKLNVDNAMESWFNEYNDY 427
GEN+YW+++ T + +L + + W +E+ +
Sbjct: 88 ANIGENMYWWTSPVVTQTDAELLGNRSANLWESEFQRF 125
>AF016661-5|AAB66052.1| 207|Caenorhabditis elegans Hypothetical
protein F02E11.5 protein.
Length = 207
Score = 33.5 bits (73), Expect = 0.084
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Frame = +2
Query: 50 VRALLILAMVVCIGHVHSKSLLNLSCKQIKDFVNGHNYRRQLLAKG-----QVSGHPAAT 214
+RAL++LA+V + V+ + S K V+ HN R +AKG + P +
Sbjct: 1 MRALILLAVVASVS-VYGQ----FSKAGQKAIVDAHNTLRSSIAKGTYVANKTRKEPGSN 55
Query: 215 EMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGSGRFQTGENLYWYSTTDSTYKLNVD-- 388
+K M WD + + N T G G+ + GENLYW + + K D
Sbjct: 56 ILK-MKWDPTIAKSAQA-------YANTCPT-GHGKSKYGENLYW-RWSGAVIKSIDDYG 105
Query: 389 -NAMESWFNEYNDYKYAHLKQSDFDKSKXKIGHYT 490
A +W +E+ Y + + D K IGH T
Sbjct: 106 VRASGAWASEFQKYGW-KTNKLDSALFKTGIGHAT 139
>Z70308-5|CAA94348.1| 207|Caenorhabditis elegans Hypothetical
protein F49E11.9 protein.
Length = 207
Score = 31.9 bits (69), Expect = 0.26
Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 6/121 (4%)
Frame = +2
Query: 146 VNGHNYRRQLLAKGQV----SGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLG 313
V+ HN R +AK + AT+M+ MV D + +N+ N T
Sbjct: 25 VDAHNKLRSAIAKSTYVAKGTKKEPATDMRKMVVDSTVAASA-------QNYANTCPTGH 77
Query: 314 SGRFQTGENLYWYSTTDSTYKLNV--DNAMESWFNEYNDYKYAHLKQSDFDKSKXKIGHY 487
S GENLYW T+ L+ + A +W E+ D+ + D IGH
Sbjct: 78 SKGTGYGENLYWSWTSADVGSLDSYGEIAAAAWEKEFQDFGWKS-NAMDTTLFNSGIGHA 136
Query: 488 T 490
T
Sbjct: 137 T 137
>U42839-2|AAC69015.1| 425|Caenorhabditis elegans
Venom-allergen-like protein protein1, isoform a protein.
Length = 425
Score = 31.1 bits (67), Expect = 0.45
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +2
Query: 332 GENLYWYSTTDSTYKLNVDNAMESWFNEYNDYKYAH---LKQSDFDKSKXKIGHYT 490
GENLY S + +++ ++W++E D+ L Q+ FD+ +GHYT
Sbjct: 306 GENLYMISINNMPKIQTAEDSSKAWWSELKDFGVGSDNILTQAVFDRG---VGHYT 358
>U42839-1|AAM54195.1| 424|Caenorhabditis elegans
Venom-allergen-like protein protein1, isoform b protein.
Length = 424
Score = 31.1 bits (67), Expect = 0.45
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +2
Query: 332 GENLYWYSTTDSTYKLNVDNAMESWFNEYNDYKYAH---LKQSDFDKSKXKIGHYT 490
GENLY S + +++ ++W++E D+ L Q+ FD+ +GHYT
Sbjct: 305 GENLYMISINNMPKIQTAEDSSKAWWSELKDFGVGSDNILTQAVFDRG---VGHYT 357
>AF112356-1|AAD27559.1| 425|Caenorhabditis elegans venom
allergen-like protein protein.
Length = 425
Score = 31.1 bits (67), Expect = 0.45
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +2
Query: 332 GENLYWYSTTDSTYKLNVDNAMESWFNEYNDYKYAH---LKQSDFDKSKXKIGHYT 490
GENLY S + +++ ++W++E D+ L Q+ FD+ +GHYT
Sbjct: 306 GENLYMISINNMPKIQTAEDSSKAWWSELKDFGVGSDNILTQAVFDRG---VGHYT 358
>AJ276028-1|CAC81655.1| 816|Caenorhabditis elegans TRP homlogous
cation channel proteinprotein.
Length = 816
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 323 FQTGEN-LYWYSTTDSTYKLNVDNAMESWFNEYN-DYKYAHLKQSDFDKSK 469
F G N L WY ++ + N N E + NE + YKY HLK+S DK K
Sbjct: 557 FACGLNQLLWYY---ASMRQNECNLYEQYKNEKSLSYKYEHLKESCDDKYK 604
>AF040654-5|AAN65302.2| 816|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 2, isoform a
protein.
Length = 816
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 323 FQTGEN-LYWYSTTDSTYKLNVDNAMESWFNEYN-DYKYAHLKQSDFDKSK 469
F G N L WY ++ + N N E + NE + YKY HLK+S DK K
Sbjct: 557 FACGLNQLLWYY---ASMRQNECNLYEQYKNEKSLSYKYEHLKESCDDKYK 604
>AF040654-4|AAN65303.2| 886|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 2, isoform b
protein.
Length = 886
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 323 FQTGEN-LYWYSTTDSTYKLNVDNAMESWFNEYN-DYKYAHLKQSDFDKSK 469
F G N L WY ++ + N N E + NE + YKY HLK+S DK K
Sbjct: 557 FACGLNQLLWYY---ASMRQNECNLYEQYKNEKSLSYKYEHLKESCDDKYK 604
>Z68108-4|CAA92136.1| 246|Caenorhabditis elegans Hypothetical
protein T05A10.5 protein.
Length = 246
Score = 28.7 bits (61), Expect = 2.4
Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 9/121 (7%)
Frame = +2
Query: 155 HNYRRQLLAKG------QVSGHPAATEMKYMVWDEELXXXXXXXXXQNKNFHNPDKTLGS 316
HN+ R LAKG + P A++M M +D L H+
Sbjct: 62 HNFYRSRLAKGFEWNGETNTSQPKASQMIKMEYDCMLERFAQNWANNCVFAHSAHYE--- 118
Query: 317 GRFQTGENLYWYSTTDSTYKLNVDNAMESWFNEYNDYKYA---HLKQSDFDKSKXKIGHY 487
R G+NLY S ++ + + A+E W+ E ++ L +D IGHY
Sbjct: 119 -RPNQGQNLYMSSFSNPDPRSLIHTAVEKWWQELEEFGTPIDNVLTPELWDLKGKAIGHY 177
Query: 488 T 490
T
Sbjct: 178 T 178
>Z77659-1|CAB01164.1| 401|Caenorhabditis elegans Hypothetical
protein F23B12.1 protein.
Length = 401
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 195 DT*PLASNCLL*LCPLTKSLICLHDKFSRDLL 100
D LA NC+ ++K +IC+H S DL+
Sbjct: 217 DAFQLAFNCMPLCAVVSKKIICMHGGISEDLI 248
>AF025453-4|ABC48262.1| 905|Caenorhabditis elegans Hypothetical
protein C08F1.5b protein.
Length = 905
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 149 NGHNYRRQLLAKGQVSGHPAATEMKYMVWD 238
NGHNY++ + K + +G TE ++ WD
Sbjct: 587 NGHNYKQAAMLKFEKAGGQGITE--FIKWD 614
>AF025453-3|AAM98053.2| 828|Caenorhabditis elegans Hypothetical
protein C08F1.5a protein.
Length = 828
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 149 NGHNYRRQLLAKGQVSGHPAATEMKYMVWD 238
NGHNY++ + K + +G TE ++ WD
Sbjct: 510 NGHNYKQAAMLKFEKAGGQGITE--FIKWD 537
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,806,042
Number of Sequences: 27780
Number of extensions: 214086
Number of successful extensions: 518
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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