Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_O18
(542 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 252 1e-67
03_01_0547 + 4093196-4093657,4094267-4095148 252 1e-67
03_01_0544 + 4082528-4082989,4083585-4084466 252 1e-67
03_01_0543 + 4076981-4077442,4078145-4079026 252 1e-67
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 104 4e-23
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 93 1e-19
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 91 5e-19
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 87 6e-18
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 87 6e-18
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 70 1e-12
02_04_0462 + 23131433-23132836 68 6e-12
06_02_0086 - 11567390-11567634,11568316-11568341,11571082-115712... 31 0.79
03_03_0053 + 14109636-14109948,14110075-14110302,14112030-141121... 30 1.4
02_04_0064 - 19375497-19375580,19375659-19375733,19376359-193765... 30 1.4
03_03_0230 - 15623648-15623653,15624333-15624383,15624477-156245... 29 1.8
10_01_0204 + 2199778-2200835,2201212-2201311 29 3.2
03_04_0206 - 18493178-18495310 29 3.2
12_01_0346 + 2652181-2653566 28 4.2
11_06_0226 + 21461174-21462018,21462508-21464439,21464746-21464845 28 4.2
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 28 4.2
06_03_1231 + 28580006-28580934,28581810-28582086 28 4.2
02_02_0101 - 6788090-6788356,6788770-6788940 28 4.2
09_04_0094 - 14552970-14553182,14553275-14553679,14553780-145539... 28 5.5
03_03_0225 - 15587557-15588774 28 5.5
02_04_0630 - 24600242-24600839,24600948-24601077,24601659-24601800 28 5.5
01_02_0020 - 10269252-10269314,10269442-10269483,10269759-102702... 28 5.5
01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794 28 5.5
09_04_0749 + 19919367-19920869 27 7.3
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 27 7.3
07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950 27 7.3
02_05_1276 + 35397948-35398298,35398937-35401738,35402085-354023... 27 7.3
07_03_1080 + 23815232-23817040 27 9.7
06_03_0748 - 24126603-24128038,24128582-24128897 27 9.7
02_01_0772 - 5755371-5756654,5757808-5757834 27 9.7
01_04_0043 + 15375459-15377606 27 9.7
01_01_0126 - 1159370-1159657,1161665-1161811,1162832-1162891,116... 27 9.7
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 252 bits (617), Expect = 1e-67
Identities = 120/173 (69%), Positives = 140/173 (80%)
Frame = +1
Query: 22 NKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFK 201
NKMD+T P YS++R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 153 NKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK 212
Query: 202 GWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGIL 381
G L+EALD I P RP+DK LRLPLQDVYKIGGIGTVPVGRVETG+L
Sbjct: 213 G------------PTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 260
Query: 382 KPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKDLRRGYV 540
KPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VKDL+RGYV
Sbjct: 261 KPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYV 313
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 252 bits (617), Expect = 1e-67
Identities = 120/173 (69%), Positives = 140/173 (80%)
Frame = +1
Query: 22 NKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFK 201
NKMD+T P YS++R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 153 NKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK 212
Query: 202 GWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGIL 381
G L+EALD I P RP+DK LRLPLQDVYKIGGIGTVPVGRVETG+L
Sbjct: 213 G------------PTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 260
Query: 382 KPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKDLRRGYV 540
KPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VKDL+RGYV
Sbjct: 261 KPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYV 313
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 252 bits (617), Expect = 1e-67
Identities = 120/173 (69%), Positives = 140/173 (80%)
Frame = +1
Query: 22 NKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFK 201
NKMD+T P YS++R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 153 NKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK 212
Query: 202 GWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGIL 381
G L+EALD I P RP+DK LRLPLQDVYKIGGIGTVPVGRVETG+L
Sbjct: 213 G------------PTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 260
Query: 382 KPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKDLRRGYV 540
KPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VKDL+RGYV
Sbjct: 261 KPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYV 313
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 252 bits (617), Expect = 1e-67
Identities = 120/173 (69%), Positives = 140/173 (80%)
Frame = +1
Query: 22 NKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFK 201
NKMD+T P YS++R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 153 NKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK 212
Query: 202 GWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGIL 381
G L+EALD I P RP+DK LRLPLQDVYKIGGIGTVPVGRVETG+L
Sbjct: 213 G------------PTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 260
Query: 382 KPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKDLRRGYV 540
KPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VKDL+RGYV
Sbjct: 261 KPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYV 313
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 104 bits (250), Expect = 4e-23
Identities = 59/178 (33%), Positives = 96/178 (53%), Gaps = 1/178 (0%)
Frame = +1
Query: 10 IVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKM 189
IV VNKMDS E YS+ RF IK ++ ++++ GY +AVA+VPIS +N++ ++
Sbjct: 378 IVVVNKMDSVE--YSKERFNFIKSQLGAFLRSCGYKDSAVAWVPISAMENENLMTTASDT 435
Query: 190 PWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPV-GRV 366
W +G CL++A+D + PP+R K LRLP+ DV+ +G V + G+V
Sbjct: 436 R-LSSWY--------DGNCLLKAIDTLPPPSRDVSKPLRLPICDVFSSHKLGQVAIGGKV 486
Query: 367 ETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKDLRRGYV 540
E G + G+ ++ P VK++E + + A GDNV ++ + + G V
Sbjct: 487 EVGATRSGSKILVMPFGELAVVKTIERNSSSCNLARAGDNVAIGLQGIDPSHIMPGGV 544
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 93.1 bits (221), Expect = 1e-19
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 1/178 (0%)
Frame = +1
Query: 10 IVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTK 186
+V +NKMD + +S+ R++EI+ ++ ++K GYN V F+PISG G NM K
Sbjct: 95 VVVINKMDESTVGWSKERYDEIEGKMVPFLKSSGYNVKKDVHFLPISGLLGTNMKTRMDK 154
Query: 187 MPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRV 366
W G CL E LD I P R +R+P+ D YK +GTV +G++
Sbjct: 155 SNC--SWW--------SGPCLFEVLDCIQVPLRDPKGPVRMPIIDKYK--DMGTVVMGKI 202
Query: 367 ETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKDLRRGYV 540
E+G + G ++ P +V SV + ++ A PG+NV + + D+ G+V
Sbjct: 203 ESGTISEGDNMLVMPNKANVKVISVHCDEDRVRSAAPGENVRVKLSGIEEDDITAGFV 260
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 91.1 bits (216), Expect = 5e-19
Identities = 55/181 (30%), Positives = 92/181 (50%), Gaps = 1/181 (0%)
Frame = +1
Query: 1 ARGIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEP 177
A+ IV +NKMD +S+ R++EI+ ++ +++ GYN V F+PISG G NM
Sbjct: 137 AKLIVVINKMDEPTVKWSKERYDEIESKMVPFLRSSGYNVKKDVHFLPISGLLGSNMKTR 196
Query: 178 STKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPV 357
K W +G CL E LD I P R +R+P+ D YK +GTV +
Sbjct: 197 MDKS--ICSWW--------DGPCLFEVLDCIEVPLRDPKGPVRMPIIDKYK--DMGTVVM 244
Query: 358 GRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKDLRRGY 537
G++E+G ++ G ++ P +V + + ++ A P +NV + + +D+ G+
Sbjct: 245 GKIESGTIREGDSLLVMPNKTNVKVIGISLDEHKVRRAGPAENVRVKLSGIEDEDIMAGF 304
Query: 538 V 540
V
Sbjct: 305 V 305
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 87.4 bits (207), Expect = 6e-18
Identities = 53/176 (30%), Positives = 92/176 (52%), Gaps = 1/176 (0%)
Frame = +1
Query: 10 IVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKM 189
IV VNKMD+ YS+ RFE IK ++ S+++ + ++V ++P+S N+++ + +
Sbjct: 394 IVAVNKMDAIG--YSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDV 451
Query: 190 PWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPV-GRV 366
W +G CL++A+D++ P+R K L LP+ DV K G G++
Sbjct: 452 R-LTSWY--------QGFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKL 502
Query: 367 ETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKDLRRG 534
ETG ++ G+ V+ +P VKS+E + A GDNV +++ + L G
Sbjct: 503 ETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAVSLQGIDGSKLILG 558
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 87.4 bits (207), Expect = 6e-18
Identities = 53/176 (30%), Positives = 92/176 (52%), Gaps = 1/176 (0%)
Frame = +1
Query: 10 IVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKM 189
IV VNKMD+ YS+ RFE IK ++ S+++ + ++V ++P+S N+++ + +
Sbjct: 394 IVAVNKMDAIG--YSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDV 451
Query: 190 PWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPV-GRV 366
W +G CL++A+D++ P+R K L LP+ DV K G G++
Sbjct: 452 R-LTSWY--------QGFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKL 502
Query: 367 ETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKDLRRG 534
ETG ++ G+ V+ +P VKS+E + A GDNV +++ + L G
Sbjct: 503 ETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAVSLQGIDGSKLILG 558
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 69.7 bits (163), Expect = 1e-12
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Frame = +1
Query: 247 LIEALDAILP-PARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPG---TVVVFAPA 414
L++A+D +P P R DK+ +P++DV+ I G GTV GRVE G +K G ++ P+
Sbjct: 249 LMDAVDEYIPDPVRQLDKSFLMPIEDVFSIQGRGTVVTGRVEQGTIKTGEDVEILGLTPS 308
Query: 415 N-ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKDLRRGYV 540
+ T V VEM + L GDNVG ++ + D++RG V
Sbjct: 309 GPLKTTVTGVEMFKKILDHGEAGDNVGLLLRGLKRGDVQRGQV 351
>02_04_0462 + 23131433-23132836
Length = 467
Score = 67.7 bits (158), Expect = 6e-12
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Frame = +1
Query: 247 LIEALDAILP-PARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANIT 423
LI+++D +P P R TD L ++DV+ I G GTV GR+E G +K G V T
Sbjct: 260 LIDSVDNYIPVPQRQTDLPFLLAVEDVFSITGRGTVATGRIERGTVKVGDTVDIVGIRET 319
Query: 424 TE--VKSVEMHHEALQEAVPGDNVGFNVKNVSVKDLRRGYV 540
V VEM + + +A+ GDNVG ++ + D+ RG V
Sbjct: 320 RNCTVTGVEMFQKTMDDAMAGDNVGLLLRGMQKDDIERGMV 360
>06_02_0086 -
11567390-11567634,11568316-11568341,11571082-11571224,
11571569-11571682,11571855-11572888,11574723-11575047,
11576843-11577124
Length = 722
Score = 30.7 bits (66), Expect = 0.79
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Frame = -1
Query: 533 PRRKSLTDTFLTLKPTL-----SPGTASCRASWCISTDLTSVVMLAGAKTTTVPGFRIPV 369
PRR S+ + L K + +P + S +T T+V +K TT G + +
Sbjct: 79 PRRASIAERILLTKRKMEEIKEAPVYPTTNVSQTTATRATTVFQHGASKPTT--GLPMNI 136
Query: 368 STLPTGTVPIPPILYTSCRGRRRALSVGRAGGRMASRASIRHLPSAFPS 222
S + + V PP + + ++ L+ +G + A +SI +PS P+
Sbjct: 137 SAVASFPVTTPPTIPSPNILKQTQLNESPSGVKAAGTSSIVSVPSVGPT 185
>03_03_0053 +
14109636-14109948,14110075-14110302,14112030-14112181,
14112305-14112578,14112687-14112739
Length = 339
Score = 29.9 bits (64), Expect = 1.4
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = -3
Query: 297 LVSGASRRKDGVEGLNKAFTFSLSFF-TLNQPSLEPWHFGGRLQHVISVPAR-NGYESDG 124
L +GA DG + F+F S T N ++ P RL + + R G SDG
Sbjct: 39 LATGAGG-DDGFSCFTRMFSFGDSITDTGNSATISPNASFNRLPYGETFFGRPTGRYSDG 97
Query: 123 SRIVTNFLDVGRDFLLDFLKSRLTV 49
IV ++G FL FL+ R TV
Sbjct: 98 RLIVDFLAELGLPFLTPFLRGRETV 122
>02_04_0064 -
19375497-19375580,19375659-19375733,19376359-19376514,
19377016-19377093,19377328-19377428,19377570-19377717,
19378172-19378316,19378803-19378906,19380257-19380385,
19380526-19380636,19380734-19380863,19381915-19382034,
19382360-19382481,19382965-19383048,19383241-19383357,
19383442-19383522,19384138-19384197,19384398-19384440,
19384528-19384626,19385353-19385564,19385964-19386091,
19386246-19386396
Length = 825
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = +1
Query: 28 MDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAV------AFVPISGWHGDNMLEPSTK 186
M STEP + + + EV IKK+GYN + A+ G+H N PS++
Sbjct: 322 MSSTEPKINT--YANFRDEVLPRIKKLGYNAVQIMAIQEHAYYGSFGYHVTNFFAPSSR 378
>03_03_0230 -
15623648-15623653,15624333-15624383,15624477-15624546,
15624646-15624848,15625011-15625116,15625228-15625295,
15625410-15625453,15628360-15628602,15629482-15629691,
15630207-15630287,15630289-15630355,15632167-15632386,
15632534-15632646,15634322-15634416,15634509-15634629
Length = 565
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 314 RGR-RRALSVGRAGGRMASRASIRHLPSAFPSLRSTNHPLNH 192
RGR RA G AGG+ RA I+ LP P+L+ + PL H
Sbjct: 313 RGRPERAGDDGLAGGQGRRRAHIKALPDEIPALKCS--PLYH 352
>10_01_0204 + 2199778-2200835,2201212-2201311
Length = 385
Score = 28.7 bits (61), Expect = 3.2
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -1
Query: 371 VSTLPTGTVP-IPPILYTSCRGRRRALSVGRAGGRMASRASIRHLPSAFPSLRSTNHP 201
+S +P +V + + S R RRR ++ RAG R+ SRA +R PS S+ HP
Sbjct: 202 ISFVPCPSVSSVRSAIVFSARRRRRQSAIARAGARV-SRAGVR--PSPASSILVGVHP 256
Score = 28.3 bits (60), Expect = 4.2
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = -1
Query: 374 PVSTLPTGTVPIPP----ILYTSCRGRR-RALSVGRAGGRMASRASIRHLPSA 231
P S++ G P P L T CRGR R + RAG R+ SRA +R P++
Sbjct: 288 PASSILVGVHPHRPPSSLSLSTLCRGRGGRESATARAGARV-SRAGVRPSPAS 339
>03_04_0206 - 18493178-18495310
Length = 710
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 19 VNKMDSTEPPYSESRFEEIKKEV 87
VNK D T Y + EEIKKEV
Sbjct: 686 VNKFDGTFEDYKDELLEEIKKEV 708
>12_01_0346 + 2652181-2653566
Length = 461
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1
Query: 272 RMASRASIRHLPSAFPSLRSTNHPLNHGILVDGSNML 162
RMA ++R + P+ + +H L+HG L DG N+L
Sbjct: 201 RMAGLTTVRIIDE--PTAAAVSHGLHHGRLRDGGNVL 235
>11_06_0226 + 21461174-21462018,21462508-21464439,21464746-21464845
Length = 958
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 253 EALDAILPPARPTDKALR-LPLQDVYKIGGIGTVPVGRVETGILK-PGTVVVFAPANITT 426
+A D ++ D+AL+ L + V +IGG+G + +V +LK F P +
Sbjct: 180 KARDDLMKRLSVGDEALKKLKMVSVVRIGGLGKTTLSKVVFDMLKLQFDCAAFVPVGQSP 239
Query: 427 EVKSV 441
E+K V
Sbjct: 240 EIKKV 244
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 355 VGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVG 492
+G + + P T+V +P T KSVE +E L A G ++G
Sbjct: 252 LGTISMDKVTPSTIVGPSPVAGITVDKSVEFSYEELSNATQGFSIG 297
>06_03_1231 + 28580006-28580934,28581810-28582086
Length = 401
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 89 LPTSRKLVTIRLPSLSYPFLAGTEITCWSRPPKCHGSRDGWLSVKKERLKVN 244
LP + K+ TI + L + + P C G GW+ + + RL +N
Sbjct: 79 LPANMKVSTIAVAPLDSIHIVAPNVNNRPSCPLCRGDVIGWIVIGEARLHLN 130
>02_02_0101 - 6788090-6788356,6788770-6788940
Length = 145
Score = 28.3 bits (60), Expect = 4.2
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +2
Query: 95 TSRKLVTIRLPSLSYPFLAGTEITCWSRPPKCHGSRDGWLSVKKERLKVNALLRPSTPSF 274
TS + V R P+ P AGTE+T + +R ++ +E + P S
Sbjct: 9 TSPRQVAARSPADHIPAAAGTEVTARATTAMEASAR----TIAEEAVVRAPSANPYNSSE 64
Query: 275 RLLAPLTRLSVFP 313
R L PL R + FP
Sbjct: 65 RCLLPLARPNCFP 77
>09_04_0094 -
14552970-14553182,14553275-14553679,14553780-14553902,
14554156-14554367,14554486-14554514,14554661-14555166
Length = 495
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 16 GVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 150
G + + PP +++ +E ++ VSS+ G AA A VP G
Sbjct: 43 GTSSSTAAAPPPTDAALQEFRRWVSSHGADAGAGAAAPAAVPEGG 87
>03_03_0225 - 15587557-15588774
Length = 405
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 378 PKAWYCCRFCPC*HHY*SQVRGNAPRGSTRSCTR 479
P+ W C FC H Y ++ G A + SC +
Sbjct: 167 PEFWTACPFCSYVHQYQRELVGRALKCPNESCRK 200
>02_04_0630 - 24600242-24600839,24600948-24601077,24601659-24601800
Length = 289
Score = 27.9 bits (59), Expect = 5.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 307 DGEPCQWGEQAEGWRRGP 254
+G+ WG + GWR+GP
Sbjct: 2 EGQQFAWGREEGGWRKGP 19
>01_02_0020 -
10269252-10269314,10269442-10269483,10269759-10270244,
10270338-10270421,10270491-10270556,10270718-10270810,
10270901-10271987,10273338-10273362,10273881-10273899
Length = 654
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 401 TTTVPGFRIPVSTLPTGTVPIPPILYTSCRGRR-RALSVGRAGGRMAS 261
T+T+P F +P T+P+ +PP + S G R V + G MA+
Sbjct: 538 TSTMPMFGVPGQTIPSSASSVPP--FASLAGLPVRPSGVPQVSGAMAN 583
>01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794
Length = 473
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 530 RRKSLTDTFLTLKPTLSPGTASCRAS 453
RR+ L D+FL LK L PG+ + S
Sbjct: 296 RREKLNDSFLALKAVLPPGSKKDKTS 321
>09_04_0749 + 19919367-19920869
Length = 500
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 349 VPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF-NVKNVSV 516
VPVG + + PG V ++ T + + + HH +++ + VG NV +V V
Sbjct: 161 VPVGEADGPLRLPGLPVELDAGDVPTFLAAHDTHHPSMRALLMNQFVGLDNVDHVFV 217
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 27.5 bits (58), Expect = 7.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 141 GYESDGSRIVTNF---LDVGRDFLLDFLKSRLTVWWLSGVHFVY 19
G E G RIV +D R+ +L+ L VW G+HFVY
Sbjct: 212 GQELAGVRIVEPLRRCMDRARE-ILEIKTGGLVVWTRGGIHFVY 254
>07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950
Length = 346
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 206 HPLNHGILVDGSNMLSPCQPEMGTKATAAG 117
HP + +L G N L+ C P + AT AG
Sbjct: 258 HPSLNQLLGVGDNFLAECYPSTASTATVAG 287
>02_05_1276 + 35397948-35398298,35398937-35401738,35402085-35402306,
35402503-35402562,35402615-35402698,35402740-35402816,
35403147-35403363
Length = 1270
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 210 QPSLEPWHFGGRLQHVISVPARN 142
QP L W GG ++SVPA N
Sbjct: 1108 QPELTAWLVGGTALQIVSVPALN 1130
>07_03_1080 + 23815232-23817040
Length = 602
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 374 PVSTLPTGTVPIPPILYTS 318
P S+ PTGT P PP+ +S
Sbjct: 123 PASSTPTGTAPTPPLSTSS 141
>06_03_0748 - 24126603-24128038,24128582-24128897
Length = 583
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 49 YSESRFEEIKKEVSSYIKKIGYNPAAVAFVP 141
+S RF KK++++ IK+I + A FVP
Sbjct: 464 HSSERFHPSKKDINAKIKEIFVDIKAAGFVP 494
>02_01_0772 - 5755371-5756654,5757808-5757834
Length = 436
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -1
Query: 338 PPILYTSCRGRRRALSVGRAGGRMASRASIRHLPSAFPSLRSTNHPL 198
PP+ ++C R G A R+ RA A PSLR++ HPL
Sbjct: 8 PPVDSSACLCRVERSVAGAAAARLMPRAKA----CAQPSLRASIHPL 50
>01_04_0043 + 15375459-15377606
Length = 715
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 144 NGYESDGSRIVTNFLDVGRDFLLDFLKSRLTVWWLSGVHF 25
+G + V ++ FL DFL S+LTV++ SG F
Sbjct: 288 DGLLGESHERVFRVIETELSFLADFLYSKLTVFYASGWWF 327
>01_01_0126 -
1159370-1159657,1161665-1161811,1162832-1162891,
1163021-1163203,1163336-1163569
Length = 303
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +1
Query: 55 ESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKA 234
E R KK ++ +++ + IS G++ EPSTK P+F + V+ + A
Sbjct: 227 EGRLSWKKKILAFIFERVRIKVGPFGPLEISLGGGNDGREPSTKDPFFVWFYVDEEIAVA 286
Query: 235 EGK 243
+G+
Sbjct: 287 QGR 289
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.136 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,032,460
Number of Sequences: 37544
Number of extensions: 392184
Number of successful extensions: 1145
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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