Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_O17
(567 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 162 3e-40
AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 162 3e-40
AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 162 3e-40
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 65 5e-11
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 65 5e-11
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 44 1e-04
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 44 1e-04
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 44 1e-04
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 44 1e-04
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 44 1e-04
>BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p
protein.
Length = 160
Score = 162 bits (394), Expect = 3e-40
Identities = 81/161 (50%), Positives = 105/161 (65%), Gaps = 4/161 (2%)
Frame = +2
Query: 53 MGKVKQEPVEQQEDQA----DVSIKTEPLSYDEKVNHCSVISKPMATXXXXXXXXXXXXX 220
MGKVK E E ++ DV+IK E SYD+K+ + I+KPMA
Sbjct: 1 MGKVKVERSEDADESVVASGDVTIKEEE-SYDDKLIFVNAIAKPMAGKKLAKKCYKLVKK 59
Query: 221 XXXXXNYIRNGLKIVQKQLRLGEKGIVFFAGDISPIEIMCHLPAVCEEKDLPYCYTPSRK 400
++RNGLK VQ +LR GE GI FAGD++P++IMCHLPAVCEEK +PY YTPSR
Sbjct: 60 AMKHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRA 119
Query: 401 DIGAAMGTMRGCIMVLVKEHEDYKDLYDEVKSEIKLLGHPL 523
D+GAAMG RG + +LV+++E+YKDLYDEVK E+ L P+
Sbjct: 120 DLGAAMGVKRGTVALLVRQNEEYKDLYDEVKEELSALNIPV 160
>AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar
protein NHP2 protein.
Length = 160
Score = 162 bits (394), Expect = 3e-40
Identities = 81/161 (50%), Positives = 105/161 (65%), Gaps = 4/161 (2%)
Frame = +2
Query: 53 MGKVKQEPVEQQEDQA----DVSIKTEPLSYDEKVNHCSVISKPMATXXXXXXXXXXXXX 220
MGKVK E E ++ DV+IK E SYD+K+ + I+KPMA
Sbjct: 1 MGKVKVERSEDADESVVASGDVTIKEEE-SYDDKLIFVNAIAKPMAGKKLAKKCYKLVKK 59
Query: 221 XXXXXNYIRNGLKIVQKQLRLGEKGIVFFAGDISPIEIMCHLPAVCEEKDLPYCYTPSRK 400
++RNGLK VQ +LR GE GI FAGD++P++IMCHLPAVCEEK +PY YTPSR
Sbjct: 60 AMKHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRA 119
Query: 401 DIGAAMGTMRGCIMVLVKEHEDYKDLYDEVKSEIKLLGHPL 523
D+GAAMG RG + +LV+++E+YKDLYDEVK E+ L P+
Sbjct: 120 DLGAAMGVKRGTVALLVRQNEEYKDLYDEVKEELSALNIPV 160
>AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA
protein.
Length = 160
Score = 162 bits (394), Expect = 3e-40
Identities = 81/161 (50%), Positives = 105/161 (65%), Gaps = 4/161 (2%)
Frame = +2
Query: 53 MGKVKQEPVEQQEDQA----DVSIKTEPLSYDEKVNHCSVISKPMATXXXXXXXXXXXXX 220
MGKVK E E ++ DV+IK E SYD+K+ + I+KPMA
Sbjct: 1 MGKVKVERSEDADESVVASGDVTIKEEE-SYDDKLIFVNAIAKPMAGKKLAKKCYKLVKK 59
Query: 221 XXXXXNYIRNGLKIVQKQLRLGEKGIVFFAGDISPIEIMCHLPAVCEEKDLPYCYTPSRK 400
++RNGLK VQ +LR GE GI FAGD++P++IMCHLPAVCEEK +PY YTPSR
Sbjct: 60 AMKHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRA 119
Query: 401 DIGAAMGTMRGCIMVLVKEHEDYKDLYDEVKSEIKLLGHPL 523
D+GAAMG RG + +LV+++E+YKDLYDEVK E+ L P+
Sbjct: 120 DLGAAMGVKRGTVALLVRQNEEYKDLYDEVKEELSALNIPV 160
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 65.3 bits (152), Expect = 5e-11
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Frame = +2
Query: 236 NYIRNGLKIVQKQLRLGEKGIVFFAGDISPIEIMCHLPAVCEEKDLPYCYTPSRKDIGAA 415
N +R G K L G IV AGD PIEI+ HLP +CE+K++PY + S++ +G A
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRA 91
Query: 416 MGTMRGCI--MVLVKEHEDYKDLYDEVKSEIKLL 511
G R + V E K ++ EI+ L
Sbjct: 92 CGVSRPIVACSVTTNEGSQLKSQITSIQQEIERL 125
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 65.3 bits (152), Expect = 5e-11
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Frame = +2
Query: 236 NYIRNGLKIVQKQLRLGEKGIVFFAGDISPIEIMCHLPAVCEEKDLPYCYTPSRKDIGAA 415
N +R G K L G IV AGD PIEI+ HLP +CE+K++PY + S++ +G A
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRA 91
Query: 416 MGTMRGCI--MVLVKEHEDYKDLYDEVKSEIKLL 511
G R + V E K ++ EI+ L
Sbjct: 92 CGVSRPIVACSVTTNEGSQLKSQITSIQQEIERL 125
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/90 (23%), Positives = 41/90 (45%)
Frame = +2
Query: 236 NYIRNGLKIVQKQLRLGEKGIVFFAGDISPIEIMCHLPAVCEEKDLPYCYTPSRKDIGAA 415
+Y+ G V K + + +V A D+ P+E++ LPA+C + +PYC + +G
Sbjct: 139 SYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRL 198
Query: 416 MGTMRGCIMVLVKEHEDYKDLYDEVKSEIK 505
+ + L + K + +V +K
Sbjct: 199 VRRKTCTTLALTTVDNNDKANFGKVLEAVK 228
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/90 (23%), Positives = 41/90 (45%)
Frame = +2
Query: 236 NYIRNGLKIVQKQLRLGEKGIVFFAGDISPIEIMCHLPAVCEEKDLPYCYTPSRKDIGAA 415
+Y+ G V K + + +V A D+ P+E++ LPA+C + +PYC + +G
Sbjct: 139 SYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRL 198
Query: 416 MGTMRGCIMVLVKEHEDYKDLYDEVKSEIK 505
+ + L + K + +V +K
Sbjct: 199 VRRKTCTTLALTTVDNNDKANFGKVLEAVK 228
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/90 (23%), Positives = 41/90 (45%)
Frame = +2
Query: 236 NYIRNGLKIVQKQLRLGEKGIVFFAGDISPIEIMCHLPAVCEEKDLPYCYTPSRKDIGAA 415
+Y+ G V K + + +V A D+ P+E++ LPA+C + +PYC + +G
Sbjct: 139 SYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRL 198
Query: 416 MGTMRGCIMVLVKEHEDYKDLYDEVKSEIK 505
+ + L + K + +V +K
Sbjct: 199 VRRKTCTTLALTTVDNNDKANFGKVLEAVK 228
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/90 (23%), Positives = 41/90 (45%)
Frame = +2
Query: 236 NYIRNGLKIVQKQLRLGEKGIVFFAGDISPIEIMCHLPAVCEEKDLPYCYTPSRKDIGAA 415
+Y+ G V K + + +V A D+ P+E++ LPA+C + +PYC + +G
Sbjct: 139 SYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRL 198
Query: 416 MGTMRGCIMVLVKEHEDYKDLYDEVKSEIK 505
+ + L + K + +V +K
Sbjct: 199 VRRKTCTTLALTTVDNNDKANFGKVLEAVK 228
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/90 (23%), Positives = 41/90 (45%)
Frame = +2
Query: 236 NYIRNGLKIVQKQLRLGEKGIVFFAGDISPIEIMCHLPAVCEEKDLPYCYTPSRKDIGAA 415
+Y+ G V K + + +V A D+ P+E++ LPA+C + +PYC + +G
Sbjct: 139 SYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRL 198
Query: 416 MGTMRGCIMVLVKEHEDYKDLYDEVKSEIK 505
+ + L + K + +V +K
Sbjct: 199 VRRKTCTTLALTTVDNNDKANFGKVLEAVK 228
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,725,714
Number of Sequences: 53049
Number of extensions: 436611
Number of successful extensions: 1399
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1396
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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