Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_O16
(391 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 231 2e-61
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 231 2e-61
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 92 2e-39
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 147 3e-36
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 137 2e-33
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 137 2e-33
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 133 5e-32
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 74 4e-14
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 74 4e-14
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 74 4e-14
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 71 2e-13
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 71 2e-13
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 45 2e-05
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 40 6e-04
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.003
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 35 0.023
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.094
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 30 0.67
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 30 0.67
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 0.67
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 29 1.5
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 29 1.5
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 27 3.6
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 27 4.7
U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical pr... 27 4.7
U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical pr... 27 4.7
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 27 4.7
Z81044-8|CAI79147.2| 165|Caenorhabditis elegans Hypothetical pr... 27 6.2
U40414-3|AAA81406.1| 321|Caenorhabditis elegans Hypothetical pr... 27 6.2
CU457740-1|CAM36331.1| 122|Caenorhabditis elegans Hypothetical ... 27 6.2
AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical ... 27 6.2
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z68106-8|CAA92125.2| 558|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z49153-3|CAD30426.1| 558|Caenorhabditis elegans Hypothetical pr... 26 8.2
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 26 8.2
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 26 8.2
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 26 8.2
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 231 bits (564), Expect = 2e-61
Identities = 107/126 (84%), Positives = 115/126 (91%)
Frame = +3
Query: 9 WKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHA 188
WKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHA
Sbjct: 78 WKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHA 137
Query: 189 LLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH 368
LLA TLGVKQLIV NKMDSTEPP+SE+RF EI EVS +IKKIGYNP AV FVPISG++
Sbjct: 138 LLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFN 197
Query: 369 GDNLLE 386
GDN+LE
Sbjct: 198 GDNMLE 203
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 231 bits (564), Expect = 2e-61
Identities = 107/126 (84%), Positives = 115/126 (91%)
Frame = +3
Query: 9 WKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHA 188
WKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHA
Sbjct: 78 WKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHA 137
Query: 189 LLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH 368
LLA TLGVKQLIV NKMDSTEPP+SE+RF EI EVS +IKKIGYNP AV FVPISG++
Sbjct: 138 LLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFN 197
Query: 369 GDNLLE 386
GDN+LE
Sbjct: 198 GDNMLE 203
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 92.3 bits (219), Expect(2) = 2e-39
Identities = 41/56 (73%), Positives = 48/56 (85%)
Frame = +3
Query: 219 LIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNLLE 386
L+V NKMDSTEPP+SE+RF EI EVS +IKKIGYNP AV FVPISG++GDN+LE
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLE 169
Score = 87.0 bits (206), Expect(2) = 2e-39
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = +3
Query: 9 WKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 128
WKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 78 WKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 147 bits (356), Expect = 3e-36
Identities = 72/95 (75%), Positives = 78/95 (82%)
Frame = +3
Query: 9 WKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHA 188
WKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHA
Sbjct: 78 WKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHA 137
Query: 189 LLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKK 293
LLA TLGVKQL V+ T P S R + I++
Sbjct: 138 LLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 137 bits (332), Expect = 2e-33
Identities = 67/128 (52%), Positives = 93/128 (72%), Gaps = 1/128 (0%)
Frame = +3
Query: 6 RWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 185
R FET + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EH
Sbjct: 240 RTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEH 299
Query: 186 ALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYI-KKIGYNPAAVAFVPISG 362
ALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG
Sbjct: 300 ALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSG 355
Query: 363 WHGDNLLE 386
+ G+NL++
Sbjct: 356 FTGENLIK 363
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 137 bits (332), Expect = 2e-33
Identities = 67/128 (52%), Positives = 93/128 (72%), Gaps = 1/128 (0%)
Frame = +3
Query: 6 RWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 185
R FET + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EH
Sbjct: 258 RTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEH 317
Query: 186 ALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYI-KKIGYNPAAVAFVPISG 362
ALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG
Sbjct: 318 ALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSG 373
Query: 363 WHGDNLLE 386
+ G+NL++
Sbjct: 374 FTGENLIK 381
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 133 bits (321), Expect = 5e-32
Identities = 59/120 (49%), Positives = 85/120 (70%), Gaps = 1/120 (0%)
Frame = +3
Query: 15 FETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 194
FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + GQTREH++L
Sbjct: 182 FETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSML 241
Query: 195 AFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHG 371
T GVK L++ VNKMD + E RF+EI+ +++ +++K+G+NP + +VP SG G
Sbjct: 242 VKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTG 301
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 73.7 bits (173), Expect = 4e-14
Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Frame = +3
Query: 12 KFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 191
++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 106 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 158
Query: 192 LAFTLGV--KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGY 326
LA +GV ++V +NK+D E P +E+R E ++ ++ + + GY
Sbjct: 159 LARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 73.7 bits (173), Expect = 4e-14
Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Frame = +3
Query: 12 KFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 191
++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 107 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 159
Query: 192 LAFTLGV--KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGY 326
LA +GV ++V +NK+D E P +E+R E ++ ++ + + GY
Sbjct: 160 LARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 73.7 bits (173), Expect = 4e-14
Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Frame = +3
Query: 12 KFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 191
++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 107 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 159
Query: 192 LAFTLGV--KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGY 326
LA +GV ++V +NK+D E P +E+R E ++ ++ + + GY
Sbjct: 160 LARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 71.3 bits (167), Expect = 2e-13
Identities = 41/101 (40%), Positives = 55/101 (54%)
Frame = +3
Query: 48 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 227
D PGH DFIKNMI GTSQ D AVL++AA G E QT+EH +LA +GVK + +
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAI 166
Query: 228 GVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFV 350
+NK D E E + ++ E + G+N A +
Sbjct: 167 FINKADLVE----EDDLDLVEMEARELLSLHGFNGDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 71.3 bits (167), Expect = 2e-13
Identities = 41/101 (40%), Positives = 55/101 (54%)
Frame = +3
Query: 48 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 227
D PGH DFIKNMI GTSQ D AVL++AA G E QT+EH +LA +GVK + +
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAI 166
Query: 228 GVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFV 350
+NK D E E + ++ E + G+N A +
Sbjct: 167 FINKADLVE----EDDLDLVEMEARELLSLHGFNGDATPVI 203
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 44.8 bits (101), Expect = 2e-05
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Frame = +3
Query: 36 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 215
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 216 QLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGY--NPAAVAFVPISGWHGDNLLE 386
++I+ +NK D E +S+ E K+V +K +G N V G+ + +L+
Sbjct: 127 RVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDENSPIVEMSLADGYFKEEMLQ 181
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 39.9 bits (89), Expect = 6e-04
Identities = 28/70 (40%), Positives = 33/70 (47%)
Frame = +3
Query: 36 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 215
VT +D PGH F G AD VL+VAA G E QT + A V
Sbjct: 206 VTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE-------QTAQSIKFAKDANV- 257
Query: 216 QLIVGVNKMD 245
QL+V VNK+D
Sbjct: 258 QLVVAVNKID 267
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.9 bits (84), Expect = 0.003
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +3
Query: 33 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 212
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 213 KQLIVGVNKMDSTEPPYSESRFEEI 287
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 34.7 bits (76), Expect = 0.023
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +3
Query: 30 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 209
Y + +ID PGH DF + + D +L+VAA G QT + LAF
Sbjct: 102 YLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQTIANFWLAFEKN 154
Query: 210 VKQLIVGVNKMD 245
+ Q+I +NK+D
Sbjct: 155 I-QIIPVINKID 165
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 32.7 bits (71), Expect = 0.094
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -1
Query: 238 LFTPTISCLTPSVKASRACSRVCPFFEIPASNSPVPAATISTA 110
LF PT+SC+ AS S P PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 29.9 bits (64), Expect = 0.67
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 30 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 140
Y + IID PGH +F M AD V++V A G
Sbjct: 201 YLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 29.9 bits (64), Expect = 0.67
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 30 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 140
Y + IID PGH +F M AD V++V A G
Sbjct: 76 YLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 0.67
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 42 IIDAPGHRDFIKNMITGTSQADCAVLIV 125
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 28.7 bits (61), Expect = 1.5
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +3
Query: 9 WKFETGKYY-VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 131
++ E G+ V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 63 YEIEEGRVLMVQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 28.7 bits (61), Expect = 1.5
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 30 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 140
+ + +ID+PGH DF + D A+++V +G
Sbjct: 110 FLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 28.3 bits (60), Expect = 2.0
Identities = 23/70 (32%), Positives = 30/70 (42%)
Frame = +3
Query: 36 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 215
+ IID PGH DF + D AVL++ G G G+ T L + +
Sbjct: 114 INIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQSQTFTVNRQLARYNV--- 165
Query: 216 QLIVGVNKMD 245
I VNKMD
Sbjct: 166 PFICFVNKMD 175
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 30 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 140
+ + +ID+PGH DF + D A+++V +G
Sbjct: 110 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 27.5 bits (58), Expect = 3.6
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 36 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 125
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 27.5 bits (58), Expect = 3.6
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 36 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 125
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 27.1 bits (57), Expect = 4.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 246 STEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 362
ST P+ SRF I +V + +KK+ +P + V + G
Sbjct: 1525 STLLPFESSRFATITTDVLALMKKVAASPRILDVVNMQG 1563
>U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical
protein T19D7.1 protein.
Length = 497
Score = 27.1 bits (57), Expect = 4.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 281 LKSRLTVWWLSGVHFVYSYN 222
+KS L ++WL V+F +SYN
Sbjct: 250 IKSLLHIFWLPHVYFPFSYN 269
>U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical
protein T03G11.3 protein.
Length = 349
Score = 27.1 bits (57), Expect = 4.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 229 PTISCLTPSVKASRACSRVCPFFE--IPASNSPVPAATISTA 110
PT+ +TPS K S + R P + P PA+T +TA
Sbjct: 270 PTLPPMTPSSKRSSSAKRDAPLQQSSTPQQRLKTPASTTTTA 311
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 27.1 bits (57), Expect = 4.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 246 STEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 362
ST P+ SRF I +V + +KK+ +P + V + G
Sbjct: 1525 STLLPFESSRFATITTDVLALMKKVAASPRILDVVNMQG 1563
>Z81044-8|CAI79147.2| 165|Caenorhabditis elegans Hypothetical
protein C30H6.12 protein.
Length = 165
Score = 26.6 bits (56), Expect = 6.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 7 GGSSKPANTMSPSSTLLDTEISSRT*SLERLK 102
GG+ KP T +PSST+ +S R S E+ K
Sbjct: 30 GGNGKPIFTATPSSTVGSPVLSDRRSSEEKEK 61
>U40414-3|AAA81406.1| 321|Caenorhabditis elegans Hypothetical
protein F53B3.6 protein.
Length = 321
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 359 RNGYESDGSRIVTNFLDVGRDFLLDFLKSRLT 264
RN Y +DG ++ D+GRD DF S T
Sbjct: 101 RNEYPNDGGVVIPIRRDIGRDPQYDFRSSPQT 132
>CU457740-1|CAM36331.1| 122|Caenorhabditis elegans Hypothetical
protein C50E10.1 protein.
Length = 122
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -1
Query: 208 PSVKASRACSRVCPFFEIPASNSPVPAATISTAQSA*DVPVIMF 77
P+ ++ ++ F+ IP+ N P +AT ST+ ++P I F
Sbjct: 43 PTSPSTDIGEQMASFWNIPSPNPPATSATSSTSPEE-EIPCICF 85
>AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical
protein Y73C8B.3 protein.
Length = 308
Score = 26.6 bits (56), Expect = 6.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 152 GFEFTSTSGDNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAG 21
GF FT+ D KH + + S+ +LDE+ + DG + + G
Sbjct: 74 GFTFTNEYPDQKHINIERQNYSNALLDELGI-----DGKMAYIG 112
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/57 (19%), Positives = 27/57 (47%)
Frame = +3
Query: 36 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 206
+ +ID PGH I+ ++ ++ D A+ +++ + G+ G ++ +L
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAI-VISESAKKVRKGLKSMGVDENSPIVEMSL 129
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein
F14F4.3b protein.
Length = 1427
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 125 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIV 30
D++H AV + +S+H +++ S S + DIV
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIV 1384
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein
F14F4.3a protein.
Length = 1400
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 125 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIV 30
D++H AV + +S+H +++ S S + DIV
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIV 1357
>Z68106-8|CAA92125.2| 558|Caenorhabditis elegans Hypothetical
protein F41E7.2 protein.
Length = 558
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/58 (22%), Positives = 26/58 (44%)
Frame = -1
Query: 247 ESILFTPTISCLTPSVKASRACSRVCPFFEIPASNSPVPAATISTAQSA*DVPVIMFL 74
++ +F P + + +A C C FF+ P S + ++T A +P ++ L
Sbjct: 150 KNYIFPPILGLGSAFSEALAICFTACVFFDFPLSLGLICGFVVATVSPAVGMPTMIRL 207
>Z49153-3|CAD30426.1| 558|Caenorhabditis elegans Hypothetical
protein F41E7.2 protein.
Length = 558
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/58 (22%), Positives = 26/58 (44%)
Frame = -1
Query: 247 ESILFTPTISCLTPSVKASRACSRVCPFFEIPASNSPVPAATISTAQSA*DVPVIMFL 74
++ +F P + + +A C C FF+ P S + ++T A +P ++ L
Sbjct: 150 KNYIFPPILGLGSAFSEALAICFTACVFFDFPLSLGLICGFVVATVSPAVGMPTMIRL 207
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 26.2 bits (55), Expect = 8.2
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +3
Query: 81 MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 260
++TG A I+ G E A + G +R + + T + I+G NK+ EP
Sbjct: 730 LLTGKEMKIDATPILLQGKKEKAAPSTVPGASRSQSTKSST-EIPTKILGANKIREYEPA 788
Query: 261 YSESRFEEIKK-EVSSYIKKI 320
+ +KK EV+ +KI
Sbjct: 789 NENEQLMNLKKQEVTGLPEKI 809
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 125 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIV 30
D++H AV + +S+H +++ S S + DIV
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIV 1384
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 125 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIV 30
D++H AV + +S+H +++ S S + DIV
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIV 1357
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,453,972
Number of Sequences: 27780
Number of extensions: 182987
Number of successful extensions: 786
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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