Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_O13
(565 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein pro... 153 3e-37
BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19 p... 153 3e-37
BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19 p... 153 3e-37
BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19 p... 153 3e-37
AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19 p... 153 3e-37
BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19 p... 152 7e-37
AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subun... 31 2.8
CR456387-1|CAG30273.1| 1171|Homo sapiens bA494O16.1 protein. 31 3.7
BC117670-1|AAI17671.1| 1171|Homo sapiens zinc finger, BED-type c... 31 3.7
AL117328-2|CAB62924.1| 1171|Homo sapiens protein ( Human DNA seq... 31 3.7
AB014537-1|BAA31612.2| 1175|Homo sapiens KIAA0637 protein protein. 31 3.7
BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein. 29 8.5
AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein. 29 8.5
AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein. 29 8.5
>M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein
protein.
Length = 145
Score = 153 bits (372), Expect = 3e-37
Identities = 71/118 (60%), Positives = 90/118 (76%)
Frame = +2
Query: 59 MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 238
M VTVKDV Q + V+ +AA LKK GK+KVP+ +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 239 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQE 412
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQALE LK+VEK Q+
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQD 118
>BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 153 bits (372), Expect = 3e-37
Identities = 71/118 (60%), Positives = 90/118 (76%)
Frame = +2
Query: 59 MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 238
M VTVKDV Q + V+ +AA LKK GK+KVP+ +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 239 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQE 412
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQALE LK+VEK Q+
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQD 118
>BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 153 bits (372), Expect = 3e-37
Identities = 71/118 (60%), Positives = 90/118 (76%)
Frame = +2
Query: 59 MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 238
M VTVKDV Q + V+ +AA LKK GK+KVP+ +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 239 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQE 412
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQALE LK+VEK Q+
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQD 118
>BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 153 bits (372), Expect = 3e-37
Identities = 71/118 (60%), Positives = 90/118 (76%)
Frame = +2
Query: 59 MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 238
M VTVKDV Q + V+ +AA LKK GK+KVP+ +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 239 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQE 412
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQALE LK+VEK Q+
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQD 118
>AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 153 bits (372), Expect = 3e-37
Identities = 71/118 (60%), Positives = 90/118 (76%)
Frame = +2
Query: 59 MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 238
M VTVKDV Q + V+ +AA LKK GK+KVP+ +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 239 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQE 412
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQALE LK+VEK Q+
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQD 118
>BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19
protein.
Length = 157
Score = 152 bits (369), Expect = 7e-37
Identities = 70/115 (60%), Positives = 89/115 (77%)
Frame = +2
Query: 68 VTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRH 247
VTVKDV Q + V+ +AA LKK GK+KVP+ +D VK A+ KELAPYD +WFY R A+ RH
Sbjct: 16 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 75
Query: 248 IYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQE 412
+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQALE LK+VEK Q+
Sbjct: 76 LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQD 130
>AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subunit
variant protein.
Length = 249
Score = 31.1 bits (67), Expect = 2.8
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +2
Query: 200 YDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 370
Y P R +LR P G + T + GGR+ G S CR G R+AL
Sbjct: 179 YTPTISRERAVELLRKCLEEGPGGAGSSTALGGGRRSVGQDRSSSCRRKGRGRRRAL 235
>CR456387-1|CAG30273.1| 1171|Homo sapiens bA494O16.1 protein.
Length = 1171
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/69 (31%), Positives = 30/69 (43%)
Frame = -2
Query: 465 NSVEVTSALGGEGIRASHS*TFSTNFNASRAWRALRAILPDDLQK*EGVTPLRLRPPKIL 286
NS V E R + T+ WRA RAI+ + G+ PL PP +L
Sbjct: 301 NSKAVCIHCMNEFSRGKNGKDLGTSCLIRHMWRAHRAIVLQE-NGGTGIPPLYSTPPTLL 359
Query: 285 VTVLTPTGE 259
++L P GE
Sbjct: 360 PSLLPPEGE 368
>BC117670-1|AAI17671.1| 1171|Homo sapiens zinc finger, BED-type
containing 4 protein.
Length = 1171
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/69 (31%), Positives = 30/69 (43%)
Frame = -2
Query: 465 NSVEVTSALGGEGIRASHS*TFSTNFNASRAWRALRAILPDDLQK*EGVTPLRLRPPKIL 286
NS V E R + T+ WRA RAI+ + G+ PL PP +L
Sbjct: 301 NSKAVCIHCMNEFSRGKNGKDLGTSCLIRHMWRAHRAIVLQE-NGGTGIPPLYSTPPTLL 359
Query: 285 VTVLTPTGE 259
++L P GE
Sbjct: 360 PSLLPPEGE 368
>AL117328-2|CAB62924.1| 1171|Homo sapiens protein ( Human DNA
sequence from clone RP11-494O16 on chromosome 22
Contains the ZBED4 gene for zinc finger, BED-type
containing 4, the gene for ).
Length = 1171
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/69 (31%), Positives = 30/69 (43%)
Frame = -2
Query: 465 NSVEVTSALGGEGIRASHS*TFSTNFNASRAWRALRAILPDDLQK*EGVTPLRLRPPKIL 286
NS V E R + T+ WRA RAI+ + G+ PL PP +L
Sbjct: 301 NSKAVCIHCMNEFSRGKNGKDLGTSCLIRHMWRAHRAIVLQE-NGGTGIPPLYSTPPTLL 359
Query: 285 VTVLTPTGE 259
++L P GE
Sbjct: 360 PSLLPPEGE 368
>AB014537-1|BAA31612.2| 1175|Homo sapiens KIAA0637 protein protein.
Length = 1175
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/69 (31%), Positives = 30/69 (43%)
Frame = -2
Query: 465 NSVEVTSALGGEGIRASHS*TFSTNFNASRAWRALRAILPDDLQK*EGVTPLRLRPPKIL 286
NS V E R + T+ WRA RAI+ + G+ PL PP +L
Sbjct: 305 NSKAVCIHCMNEFSRGKNGKDLGTSCLIRHMWRAHRAIVLQE-NGGTGIPPLYSTPPTLL 363
Query: 285 VTVLTPTGE 259
++L P GE
Sbjct: 364 PSLLPPEGE 372
>BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein.
Length = 1481
Score = 29.5 bits (63), Expect = 8.5
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 115 RSLEKDRQSEGSRSYGLGKDSSFQGTGS 198
++L K+R GS S+ LG+ SS+QGTGS
Sbjct: 1359 QTLVKNRTFSGSLSH-LGESSSYQGTGS 1385
>AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein.
Length = 1490
Score = 29.5 bits (63), Expect = 8.5
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 115 RSLEKDRQSEGSRSYGLGKDSSFQGTGS 198
++L K+R GS S+ LG+ SS+QGTGS
Sbjct: 1368 QTLVKNRTFSGSLSH-LGESSSYQGTGS 1394
>AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein.
Length = 1535
Score = 29.5 bits (63), Expect = 8.5
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 115 RSLEKDRQSEGSRSYGLGKDSSFQGTGS 198
++L K+R GS S+ LG+ SS+QGTGS
Sbjct: 1413 QTLVKNRTFSGSLSH-LGESSSYQGTGS 1439
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,407,348
Number of Sequences: 237096
Number of extensions: 1556740
Number of successful extensions: 3612
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3612
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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