Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_O13
         (565 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118868-1|AAM50728.1|  156|Drosophila melanogaster GM26647p pro...   182   3e-46
AF216206-1|AAF65682.1|  156|Drosophila melanogaster ribosomal pr...   182   3e-46
AE014298-2436|AAN09413.1|  156|Drosophila melanogaster CG4464-PC...   182   3e-46
AE014298-2435|AAN09412.1|  156|Drosophila melanogaster CG4464-PB...   182   3e-46
AE014298-2434|AAF48633.1|  156|Drosophila melanogaster CG4464-PA...   182   3e-46
X73153-1|CAA51677.1|  156|Drosophila melanogaster ribosomal prot...   182   4e-46
AY119257-1|AAM51117.1|  155|Drosophila melanogaster SD22440p pro...   145   3e-35
AE014297-3411|AAN13960.1|  155|Drosophila melanogaster CG5338-PB...   145   3e-35
BT030121-1|ABN49260.1|  883|Drosophila melanogaster IP13269p pro...    29   5.7  
AE014297-3150|AAN14377.1|  910|Drosophila melanogaster CG31285-P...    29   5.7  

>AY118868-1|AAM50728.1|  156|Drosophila melanogaster GM26647p
           protein.
          Length = 156

 Score =  182 bits (443), Expect = 3e-46
 Identities = 82/115 (71%), Positives = 96/115 (83%)
 Frame = +2

Query: 59  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 238
           M  VTVKD++Q  + K VA  LKK GK+KVPD MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60

Query: 239 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEK 403
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEK 115


>AF216206-1|AAF65682.1|  156|Drosophila melanogaster ribosomal
           protein S19 protein.
          Length = 156

 Score =  182 bits (443), Expect = 3e-46
 Identities = 82/115 (71%), Positives = 96/115 (83%)
 Frame = +2

Query: 59  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 238
           M  VTVKD++Q  + K VA  LKK GK+KVPD MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60

Query: 239 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEK 403
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEK 115


>AE014298-2436|AAN09413.1|  156|Drosophila melanogaster CG4464-PC,
           isoform C protein.
          Length = 156

 Score =  182 bits (443), Expect = 3e-46
 Identities = 82/115 (71%), Positives = 96/115 (83%)
 Frame = +2

Query: 59  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 238
           M  VTVKD++Q  + K VA  LKK GK+KVPD MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60

Query: 239 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEK 403
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEK 115


>AE014298-2435|AAN09412.1|  156|Drosophila melanogaster CG4464-PB,
           isoform B protein.
          Length = 156

 Score =  182 bits (443), Expect = 3e-46
 Identities = 82/115 (71%), Positives = 96/115 (83%)
 Frame = +2

Query: 59  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 238
           M  VTVKD++Q  + K VA  LKK GK+KVPD MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60

Query: 239 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEK 403
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEK 115


>AE014298-2434|AAF48633.1|  156|Drosophila melanogaster CG4464-PA,
           isoform A protein.
          Length = 156

 Score =  182 bits (443), Expect = 3e-46
 Identities = 82/115 (71%), Positives = 96/115 (83%)
 Frame = +2

Query: 59  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 238
           M  VTVKD++Q  + K VA  LKK GK+KVPD MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60

Query: 239 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEK 403
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEK 115


>X73153-1|CAA51677.1|  156|Drosophila melanogaster ribosomal protein
           S19 protein.
          Length = 156

 Score =  182 bits (442), Expect = 4e-46
 Identities = 81/115 (70%), Positives = 96/115 (83%)
 Frame = +2

Query: 59  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 238
           M  VTVKD++Q  + K VA  LKK GK+KVPD MD++KTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIIKTAKFKELAPYDPDWFYVRCASI 60

Query: 239 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEK 403
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEK 115


>AY119257-1|AAM51117.1|  155|Drosophila melanogaster SD22440p
           protein.
          Length = 155

 Score =  145 bits (352), Expect = 3e-35
 Identities = 66/115 (57%), Positives = 83/115 (72%)
 Frame = +2

Query: 59  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 238
           M  VTVK+++Q  + K +AA LKK GK+ VP+    +KT +FKE AP D DWFY RCA+I
Sbjct: 1   MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASI 60

Query: 239 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEK 403
           +RH+Y+RSP GV   TK++ GRKRNGV PS  CRSS    RKALQALEA  +VE+
Sbjct: 61  MRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVER 115


>AE014297-3411|AAN13960.1|  155|Drosophila melanogaster CG5338-PB
           protein.
          Length = 155

 Score =  145 bits (352), Expect = 3e-35
 Identities = 66/115 (57%), Positives = 83/115 (72%)
 Frame = +2

Query: 59  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 238
           M  VTVK+++Q  + K +AA LKK GK+ VP+    +KT +FKE AP D DWFY RCA+I
Sbjct: 1   MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASI 60

Query: 239 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEK 403
           +RH+Y+RSP GV   TK++ GRKRNGV PS  CRSS    RKALQALEA  +VE+
Sbjct: 61  MRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVER 115


>BT030121-1|ABN49260.1|  883|Drosophila melanogaster IP13269p
           protein.
          Length = 883

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -3

Query: 539 YYESNYRT-ITCCLACCLAFRRTCAAILSR 453
           YYE   RT   CC+A C+A    CA  L R
Sbjct: 598 YYEQFERTQFKCCVAICVAHPGPCAEYLCR 627


>AE014297-3150|AAN14377.1|  910|Drosophila melanogaster CG31285-PA
           protein.
          Length = 910

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -3

Query: 539 YYESNYRT-ITCCLACCLAFRRTCAAILSR 453
           YYE   RT   CC+A C+A    CA  L R
Sbjct: 625 YYEQFERTQFKCCVAICVAHPGPCAEYLCR 654


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,072,573
Number of Sequences: 53049
Number of extensions: 469493
Number of successful extensions: 1152
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)