Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_O08
         (512 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    24   2.6  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   3.5  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   6.1  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    23   8.0  

>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 99  ENLYTTMSERLKNSAQTSNEDI 164
           ENL++T+  +LKN    S +D+
Sbjct: 271 ENLWSTLKRQLKNQPARSADDL 292


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 231  TSSETDSPELPSKSQGSGDTPKTAPSQSHVDKNYDFTEDE 350
            +SSE+ S    S    S  + +  P++ H  +   +TE E
Sbjct: 1924 SSSESSSSSDESDDSNSSSSEERKPNREHFFEKQQYTEKE 1963


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 22/89 (24%), Positives = 37/89 (41%)
 Frame = +1

Query: 151  QMKILLMTLQKI*NHRSEQ*KTLRAILQALKLIVQSYLLNLRALETHQKQLLHSHM*IRI 330
            QM+I    +Q   N+  EQ   L A +Q L             L+  + +L   HM +  
Sbjct: 774  QMQIRAQEIQTQINYLQEQQGELEATIQRLTA----------KLKQQEMELKRMHMDVAS 823

Query: 331  MTSQRMRLKKVTPVIQTLLMKCHSKMQRL 417
            +T Q  RLK+        + + HS  +++
Sbjct: 824  LTQQMPRLKEQVDWQAERVARTHSDPEKV 852


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 99  ENLYTTMSERLKNSAQTSNEDI 164
           ENL++T+   +KN    S +D+
Sbjct: 199 ENLWSTLKRHVKNQPARSADDL 220


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,735
Number of Sequences: 2352
Number of extensions: 8401
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)