Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_O08
(512 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46570-1|AAB36871.1| 292|Homo sapiens tetratricopeptide repeat ... 33 0.59
AK222984-1|BAD96704.1| 292|Homo sapiens tetratricopeptide repea... 33 0.59
AK222641-1|BAD96361.1| 292|Homo sapiens tetratricopeptide repea... 33 0.59
X72177-1|CAA50994.1| 934|Homo sapiens complement component C6 p... 33 0.77
J05064-1|AAA51860.1| 934|Homo sapiens C6 protein. 33 0.77
J05024-1|AAA59668.1| 934|Homo sapiens completement component C6... 33 0.77
J04506-1|AAB59433.1| 491|Homo sapiens complement component C6 p... 33 0.77
BC035723-1|AAH35723.1| 934|Homo sapiens C6 protein protein. 33 0.77
AB126592-1|BAD02321.1| 934|Homo sapiens complement component 6 ... 33 0.77
EF159161-1|ABM46908.1| 448|Homo sapiens unknown protein. 32 1.0
BC018687-1|AAH18687.1| 213|Homo sapiens chromosome 20 open read... 32 1.0
BC054511-1|AAH54511.1| 1528|Homo sapiens deleted in liver cancer... 31 1.8
BC000942-1|AAH00942.1| 292|Homo sapiens tetratricopeptide repea... 31 1.8
AB051510-1|BAB21814.1| 1554|Homo sapiens KIAA1723 protein protein. 31 1.8
U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein. 31 3.1
BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein. 30 5.5
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 30 5.5
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 30 5.5
AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane muc... 30 5.5
AF016692-1|AAB71685.1| 648|Homo sapiens small intestinal mucin ... 30 5.5
EF179185-1|ABN05288.1| 2015|Homo sapiens sodium channel, voltage... 29 7.2
DQ363529-1|ABC88012.1| 1099|Homo sapiens low-voltage-activated c... 29 7.2
DQ363528-1|ABC88011.1| 1083|Homo sapiens low-voltage-activated c... 29 7.2
DQ363527-1|ABC88010.1| 1088|Homo sapiens low-voltage-activated c... 29 7.2
DQ363526-1|ABC88009.1| 1077|Homo sapiens low-voltage-activated c... 29 7.2
AY148488-1|AAN61120.1| 2015|Homo sapiens cardiac sodium channel ... 29 7.2
AY038064-1|AAK74065.1| 2015|Homo sapiens voltage-gated sodium ch... 29 7.2
AJ420779-1|CAD12646.1| 2347|Homo sapiens calcium channel, voltag... 29 7.2
AF482988-1|AAO91669.1| 2015|Homo sapiens cardiac sodium channel ... 29 7.2
AF223563-1|AAF60163.1| 1536|Homo sapiens low-voltage-activated c... 29 7.2
AF073931-1|AAD17668.1| 2353|Homo sapiens low-voltage activated c... 29 7.2
AF051946-1|AAC67239.3| 2353|Homo sapiens T-type calcium channel ... 29 7.2
AE006466-3|AAK61268.1| 2373|Homo sapiens voltage dependent t-typ... 29 7.2
AB208866-1|BAD92103.1| 1576|Homo sapiens voltage-gated sodium ch... 29 7.2
BC035266-1|AAH35266.1| 794|Homo sapiens BRD4 protein protein. 29 9.5
AY684169-1|AAT74627.1| 3052|Homo sapiens REV3-like, catalytic su... 29 9.5
AL512325-1|CAI20998.1| 3130|Homo sapiens REV3-like, catalytic su... 29 9.5
AL136310-2|CAI20509.1| 3130|Homo sapiens REV3-like, catalytic su... 29 9.5
AL080317-2|CAI19192.1| 3130|Homo sapiens REV3-like, catalytic su... 29 9.5
AF179429-1|AAG09403.1| 3052|Homo sapiens DNA polymerase zeta cat... 29 9.5
AF179428-1|AAG09402.1| 3052|Homo sapiens DNA polymerase zeta cat... 29 9.5
AF157476-1|AAD40184.1| 3130|Homo sapiens DNA polymerase zeta cat... 29 9.5
AF078695-1|AAC28460.1| 3052|Homo sapiens DNA polymerase zeta cat... 29 9.5
AF071798-1|AAC24009.1| 3130|Homo sapiens DNA polymerase zeta cat... 29 9.5
AF058701-1|AAC24357.1| 3130|Homo sapiens DNA polymerase zeta cat... 29 9.5
AF035537-1|AAB88486.1| 3052|Homo sapiens DNA polymerase zeta pro... 29 9.5
>U46570-1|AAB36871.1| 292|Homo sapiens tetratricopeptide repeat
protein protein.
Length = 292
Score = 33.1 bits (72), Expect = 0.59
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 399 LKDAEVDMTDEEKEYRRSVAEEFKLKGNDAFLVADY 506
L + E +M+DEEK+ RR + K +GN+ F DY
Sbjct: 97 LIELEKNMSDEEKQKRREESTRLKEEGNEQFKKGDY 132
>AK222984-1|BAD96704.1| 292|Homo sapiens tetratricopeptide repeat
domain 1 variant protein.
Length = 292
Score = 33.1 bits (72), Expect = 0.59
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 399 LKDAEVDMTDEEKEYRRSVAEEFKLKGNDAFLVADY 506
L + E +M+DEEK+ RR + K +GN+ F DY
Sbjct: 97 LIELEKNMSDEEKQKRREESTRLKEEGNEQFKKGDY 132
>AK222641-1|BAD96361.1| 292|Homo sapiens tetratricopeptide repeat
domain 1 variant protein.
Length = 292
Score = 33.1 bits (72), Expect = 0.59
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 399 LKDAEVDMTDEEKEYRRSVAEEFKLKGNDAFLVADY 506
L + E +M+DEEK+ RR + K +GN+ F DY
Sbjct: 97 LIELEKNMSDEEKQKRREESTRLKEEGNEQFKKGDY 132
>X72177-1|CAA50994.1| 934|Homo sapiens complement component C6
protein.
Length = 934
Score = 32.7 bits (71), Expect = 0.77
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 123 ERLKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELP 263
E + QT+ +D+ D KDL +SLG EN +G+F+S S +P
Sbjct: 237 ENVGFEVQTAEDDLKTDFYKDL-TSLGHNENQQGSFSSQGGSSFSVP 282
>J05064-1|AAA51860.1| 934|Homo sapiens C6 protein.
Length = 934
Score = 32.7 bits (71), Expect = 0.77
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 123 ERLKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELP 263
E + QT+ +D+ D KDL +SLG EN +G+F+S S +P
Sbjct: 237 ENVGFEVQTAEDDLKTDFYKDL-TSLGHNENQQGSFSSQGGSSFSVP 282
>J05024-1|AAA59668.1| 934|Homo sapiens completement component C6
protein.
Length = 934
Score = 32.7 bits (71), Expect = 0.77
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 123 ERLKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELP 263
E + QT+ +D+ D KDL +SLG EN +G+F+S S +P
Sbjct: 237 ENVGFEVQTAEDDLKTDFYKDL-TSLGHNENQQGSFSSQGGSSFSVP 282
>J04506-1|AAB59433.1| 491|Homo sapiens complement component C6
protein.
Length = 491
Score = 32.7 bits (71), Expect = 0.77
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 123 ERLKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELP 263
E + QT+ +D+ D KDL +SLG EN +G+F+S S +P
Sbjct: 237 ENVGFEVQTAEDDLKTDFYKDL-TSLGHNENQQGSFSSQGGSSFSVP 282
>BC035723-1|AAH35723.1| 934|Homo sapiens C6 protein protein.
Length = 934
Score = 32.7 bits (71), Expect = 0.77
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 123 ERLKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELP 263
E + QT+ +D+ D KDL +SLG EN +G+F+S S +P
Sbjct: 237 ENVGFEVQTAEDDLKTDFYKDL-TSLGHNENQQGSFSSQGGSSFSVP 282
>AB126592-1|BAD02321.1| 934|Homo sapiens complement component 6
protein.
Length = 934
Score = 32.7 bits (71), Expect = 0.77
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 123 ERLKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELP 263
E + QT+ +D+ D KDL +SLG EN +G+F+S S +P
Sbjct: 237 ENVGFEVQTAEDDLKTDFYKDL-TSLGHNENQQGSFSSQGGSSFSVP 282
>EF159161-1|ABM46908.1| 448|Homo sapiens unknown protein.
Length = 448
Score = 32.3 bits (70), Expect = 1.0
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +3
Query: 210 ENSEGNFTSSETDSPELPSKSQGSGDTPKT----APSQSHVDKNYDFTEDEAKE 359
E EG E D+P +P KS+GS D T S VDK D TE + ++
Sbjct: 378 EEKEGEKAPGE-DTPRMPGKSEGSSDLENTPGPDVEMNSQVDKVNDPTESQQED 430
>BC018687-1|AAH18687.1| 213|Homo sapiens chromosome 20 open reading
frame 133 protein.
Length = 213
Score = 32.3 bits (70), Expect = 1.0
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +3
Query: 210 ENSEGNFTSSETDSPELPSKSQGSGDTPKT----APSQSHVDKNYDFTEDEAKE 359
E EG E D+P +P KS+GS D T S VDK D TE + ++
Sbjct: 143 EEKEGEKAPGE-DTPRMPGKSEGSSDLENTPGPDVEMNSQVDKVNDPTESQQED 195
>BC054511-1|AAH54511.1| 1528|Homo sapiens deleted in liver cancer 1
protein.
Length = 1528
Score = 31.5 bits (68), Expect = 1.8
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +3
Query: 99 ENLYTTMSERLKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFT-SSETDSPELPSKS- 272
EN +T S + T+ + DL +S TI ++ SS+T+S +LPS +
Sbjct: 370 ENALSTSSS--PSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTESTDLPSSTP 427
Query: 273 -QGSGDTPKTAPSQSHVDKNYDFTEDEAKE 359
SG PKT Q +K + E EAKE
Sbjct: 428 VANSGTKPKTTAIQGISEK--EKAEIEAKE 455
>BC000942-1|AAH00942.1| 292|Homo sapiens tetratricopeptide repeat
domain 1 protein.
Length = 292
Score = 31.5 bits (68), Expect = 1.8
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 399 LKDAEVDMTDEEKEYRRSVAEEFKLKGNDAFLVADY 506
L + + +M+DEEK+ RR + K +GN+ F DY
Sbjct: 97 LIELKKNMSDEEKQKRREESTRLKEEGNEQFKKGDY 132
>AB051510-1|BAB21814.1| 1554|Homo sapiens KIAA1723 protein protein.
Length = 1554
Score = 31.5 bits (68), Expect = 1.8
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +3
Query: 99 ENLYTTMSERLKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFT-SSETDSPELPSKS- 272
EN +T S + T+ + DL +S TI ++ SS+T+S +LPS +
Sbjct: 396 ENALSTSSS--PSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTESTDLPSSTP 453
Query: 273 -QGSGDTPKTAPSQSHVDKNYDFTEDEAKE 359
SG PKT Q +K + E EAKE
Sbjct: 454 VANSGTKPKTTAIQGISEK--EKAEIEAKE 481
>U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.
Length = 4861
Score = 30.7 bits (66), Expect = 3.1
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = +3
Query: 183 DLKSSLGTIENSEGNFTSSETDSPELPSKSQGSGDTPKTAPSQSHVDKNYDFTEDEAK 356
D+KS T SE S D P LPS T + H+ KN+D + E +
Sbjct: 2448 DVKSQSTTSSKSENEIASFSLD-PTLPSVESQHQITEGKRKNHEHMSKNHDVAQSEIR 2504
>BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein.
Length = 1224
Score = 29.9 bits (64), Expect = 5.5
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 96 DENLYTTMSERLKNSAQTSNEDIIDDLT-KDLKSSLGTIENSEGNFTSSETDSPELPSKS 272
D N + T S + +S T + T + SSL T+ S TSSE +P PS
Sbjct: 274 DSNTFVTSSSQASSSPATLQVTTMRMSTPSEGSSSLTTMLLSSTYVTSSEASTPSTPSVD 333
Query: 273 QGSGDTPKTAPSQSH 317
+ TP T +QS+
Sbjct: 334 R---STPVTTSTQSN 345
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 29.9 bits (64), Expect = 5.5
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 96 DENLYTTMSERLKNSAQTSNEDIIDDLT-KDLKSSLGTIENSEGNFTSSETDSPELPSKS 272
D N + T S + +S T + T + SSL T+ S TSSE +P PS
Sbjct: 3543 DSNTFVTSSSQASSSPATLQVTTMRMSTPSEGSSSLTTMLLSSTYVTSSEASTPSTPSVD 3602
Query: 273 QGSGDTPKTAPSQSH 317
+ TP T +QS+
Sbjct: 3603 R---STPVTTSTQSN 3614
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 29.9 bits (64), Expect = 5.5
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 96 DENLYTTMSERLKNSAQTSNEDIIDDLT-KDLKSSLGTIENSEGNFTSSETDSPELPSKS 272
D N + T S + +S T + T + SSL T+ S TSSE +P PS
Sbjct: 3543 DSNTFVTSSSQASSSPATLQVTTMRMSTPSEGSSSLTTMLLSSTYVTSSEASTPSTPSVD 3602
Query: 273 QGSGDTPKTAPSQSH 317
+ TP T +QS+
Sbjct: 3603 R---STPVTTSTQSN 3614
>AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane mucin
MUC17 protein.
Length = 1029
Score = 29.9 bits (64), Expect = 5.5
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 96 DENLYTTMSERLKNSAQTSNEDIIDDLT-KDLKSSLGTIENSEGNFTSSETDSPELPSKS 272
D N + T S + +S T + T + SSL T+ S TSSE +P PS
Sbjct: 79 DSNTFVTSSSQASSSPATLQVTTMRMSTPSEGSSSLTTMLLSSTYVTSSEASTPSTPSVD 138
Query: 273 QGSGDTPKTAPSQSH 317
+ TP T +QS+
Sbjct: 139 R---STPVTTSTQSN 150
>AF016692-1|AAB71685.1| 648|Homo sapiens small intestinal mucin
MUC3 protein.
Length = 648
Score = 29.9 bits (64), Expect = 5.5
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 96 DENLYTTMSERLKNSAQTSNEDIIDDLT-KDLKSSLGTIENSEGNFTSSETDSPELPSKS 272
D N + T S + +S T + T + SSL T+ S TSSE +P PS
Sbjct: 79 DSNTFVTSSSQASSSPATLQVTTMRMSTPSEGSSSLTTMLLSSTYVTSSEASTPSTPSVD 138
Query: 273 QGSGDTPKTAPSQSH 317
+ TP T +QS+
Sbjct: 139 R---STPVTTSTQSN 150
>EF179185-1|ABN05288.1| 2015|Homo sapiens sodium channel,
voltage-gated, type V, alpha (long QT syndrome 3)
protein.
Length = 2015
Score = 29.5 bits (63), Expect = 7.2
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 156 EDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELPSKSQGSGDTPKTAPSQS 314
E DD +D ++SLGT E S + + PE P S+ TA S++
Sbjct: 1053 ESDTDDQEEDEENSLGTEEESSKQESQPVSGGPEAPPDSRTWSQVSATASSEA 1105
>DQ363529-1|ABC88012.1| 1099|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 577
protein.
Length = 1099
Score = 29.5 bits (63), Expect = 7.2
Identities = 21/93 (22%), Positives = 36/93 (38%)
Frame = +3
Query: 69 YFKGFL*LFDENLYTTMSERLKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETD 248
YF F+ + L + L + SN++ +D D + L + G+ + D
Sbjct: 585 YFVTFVLVAQFVLVNVVVAVLMKHLEESNKEAREDAELDAEIEL-EMAQGPGSARRVDAD 643
Query: 249 SPELPSKSQGSGDTPKTAPSQSHVDKNYDFTED 347
P LP +S G+ D P + V + D
Sbjct: 644 RPPLPQESPGARDAPNLVARKVSVSRMLSLPND 676
>DQ363528-1|ABC88011.1| 1083|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 544
protein.
Length = 1083
Score = 29.5 bits (63), Expect = 7.2
Identities = 21/93 (22%), Positives = 36/93 (38%)
Frame = +3
Query: 69 YFKGFL*LFDENLYTTMSERLKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETD 248
YF F+ + L + L + SN++ +D D + L + G+ + D
Sbjct: 580 YFVTFVLVAQFVLVNVVVAVLMKHLEESNKEAREDAELDAEIEL-EMAQGPGSARRVDAD 638
Query: 249 SPELPSKSQGSGDTPKTAPSQSHVDKNYDFTED 347
P LP +S G+ D P + V + D
Sbjct: 639 RPPLPQESPGARDAPNLVARKVSVSRMLSLPND 671
>DQ363527-1|ABC88010.1| 1088|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 513
protein.
Length = 1088
Score = 29.5 bits (63), Expect = 7.2
Identities = 21/93 (22%), Positives = 36/93 (38%)
Frame = +3
Query: 69 YFKGFL*LFDENLYTTMSERLKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETD 248
YF F+ + L + L + SN++ +D D + L + G+ + D
Sbjct: 574 YFVTFVLVAQFVLVNVVVAVLMKHLEESNKEAREDAELDAEIEL-EMAQGPGSARRVDAD 632
Query: 249 SPELPSKSQGSGDTPKTAPSQSHVDKNYDFTED 347
P LP +S G+ D P + V + D
Sbjct: 633 RPPLPQESPGARDAPNLVARKVSVSRMLSLPND 665
>DQ363526-1|ABC88009.1| 1077|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 512
protein.
Length = 1077
Score = 29.5 bits (63), Expect = 7.2
Identities = 21/93 (22%), Positives = 36/93 (38%)
Frame = +3
Query: 69 YFKGFL*LFDENLYTTMSERLKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETD 248
YF F+ + L + L + SN++ +D D + L + G+ + D
Sbjct: 574 YFVTFVLVAQFVLVNVVVAVLMKHLEESNKEAREDAELDAEIEL-EMAQGPGSARRVDAD 632
Query: 249 SPELPSKSQGSGDTPKTAPSQSHVDKNYDFTED 347
P LP +S G+ D P + V + D
Sbjct: 633 RPPLPQESPGARDAPNLVARKVSVSRMLSLPND 665
>AY148488-1|AAN61120.1| 2015|Homo sapiens cardiac sodium channel alpha
subunit Nav1.5 protein.
Length = 2015
Score = 29.5 bits (63), Expect = 7.2
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 156 EDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELPSKSQGSGDTPKTAPSQS 314
E DD +D ++SLGT E S + + PE P S+ TA S++
Sbjct: 1053 ESDTDDQEEDEENSLGTEEESSKQESQPVSGGPEAPPDSRTWSQVSATASSEA 1105
>AY038064-1|AAK74065.1| 2015|Homo sapiens voltage-gated sodium channel
type V alpha subunit jejunal variant protein.
Length = 2015
Score = 29.5 bits (63), Expect = 7.2
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 156 EDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELPSKSQGSGDTPKTAPSQS 314
E DD +D ++SLGT E S + + PE P S+ TA S++
Sbjct: 1053 ESDTDDQEEDEENSLGTEEESSKQESQPVSGGPEAPPDSRTWSQVSATASSEA 1105
>AJ420779-1|CAD12646.1| 2347|Homo sapiens calcium channel,
voltage-dependent, T type, alphant regulator of
chromatin, sub protein.
Length = 2347
Score = 29.5 bits (63), Expect = 7.2
Identities = 21/93 (22%), Positives = 36/93 (38%)
Frame = +3
Query: 69 YFKGFL*LFDENLYTTMSERLKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETD 248
YF F+ + L + L + SN++ +D D + L + G+ + D
Sbjct: 1833 YFVTFVLVAQFVLVNVVVAVLMKHLEESNKEAREDAELDAEIEL-EMAQGPGSARRVDAD 1891
Query: 249 SPELPSKSQGSGDTPKTAPSQSHVDKNYDFTED 347
P LP +S G+ D P + V + D
Sbjct: 1892 RPPLPQESPGARDAPNLVARKVSVSRMLSLPND 1924
>AF482988-1|AAO91669.1| 2015|Homo sapiens cardiac sodium channel alpha
subunit protein.
Length = 2015
Score = 29.5 bits (63), Expect = 7.2
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 156 EDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELPSKSQGSGDTPKTAPSQS 314
E DD +D ++SLGT E S + + PE P S+ TA S++
Sbjct: 1053 ESDTDDQEEDEENSLGTEEESSKQESQPVSGGPEAPPDSRTWSQVSATASSEA 1105
>AF223563-1|AAF60163.1| 1536|Homo sapiens low-voltage-activated
calcium channel alpha13.2 subunit delta25B splice variant
protein.
Length = 1536
Score = 29.5 bits (63), Expect = 7.2
Identities = 21/93 (22%), Positives = 36/93 (38%)
Frame = +3
Query: 69 YFKGFL*LFDENLYTTMSERLKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETD 248
YF F+ + L + L + SN++ +D D + L + G+ + D
Sbjct: 1022 YFVTFVLVAQFVLVNVVVAVLMKHLEESNKEAREDAELDAEIEL-EMAQGPGSARRVDAD 1080
Query: 249 SPELPSKSQGSGDTPKTAPSQSHVDKNYDFTED 347
P LP +S G+ D P + V + D
Sbjct: 1081 RPPLPQESPGARDAPNLVARKVSVSRMLSLPND 1113
>AF073931-1|AAD17668.1| 2353|Homo sapiens low-voltage activated
calcium channel alpha 1H protein.
Length = 2353
Score = 29.5 bits (63), Expect = 7.2
Identities = 21/93 (22%), Positives = 36/93 (38%)
Frame = +3
Query: 69 YFKGFL*LFDENLYTTMSERLKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETD 248
YF F+ + L + L + SN++ +D D + L + G+ + D
Sbjct: 1839 YFVTFVLVAQFVLVNVVVAVLMKHLEESNKEAREDAELDAEIEL-EMAQGPGSARRVDAD 1897
Query: 249 SPELPSKSQGSGDTPKTAPSQSHVDKNYDFTED 347
P LP +S G+ D P + V + D
Sbjct: 1898 RPPLPQESPGARDAPNLVARKVSVSRMLSLPND 1930
>AF051946-1|AAC67239.3| 2353|Homo sapiens T-type calcium channel alpha
1H subunit protein.
Length = 2353
Score = 29.5 bits (63), Expect = 7.2
Identities = 21/93 (22%), Positives = 36/93 (38%)
Frame = +3
Query: 69 YFKGFL*LFDENLYTTMSERLKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETD 248
YF F+ + L + L + SN++ +D D + L + G+ + D
Sbjct: 1839 YFVTFVLVAQFVLVNVVVAVLMKHLEESNKEAREDAELDAEIEL-EMAQGPGSARRVDAD 1897
Query: 249 SPELPSKSQGSGDTPKTAPSQSHVDKNYDFTED 347
P LP +S G+ D P + V + D
Sbjct: 1898 RPPLPQESPGARDAPNLVARKVSVSRMLSLPND 1930
>AE006466-3|AAK61268.1| 2373|Homo sapiens voltage dependent t-type
calcium channel alpha-1H subunit protein.
Length = 2373
Score = 29.5 bits (63), Expect = 7.2
Identities = 21/93 (22%), Positives = 36/93 (38%)
Frame = +3
Query: 69 YFKGFL*LFDENLYTTMSERLKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETD 248
YF F+ + L + L + SN++ +D D + L + G+ + D
Sbjct: 1859 YFVTFVLVAQFVLVNVVVAVLMKHLEESNKEAREDAELDAEIEL-EMAQGPGSARRVDAD 1917
Query: 249 SPELPSKSQGSGDTPKTAPSQSHVDKNYDFTED 347
P LP +S G+ D P + V + D
Sbjct: 1918 RPPLPQESPGARDAPNLVARKVSVSRMLSLPND 1950
>AB208866-1|BAD92103.1| 1576|Homo sapiens voltage-gated sodium
channel type V alpha isoform b variant protein.
Length = 1576
Score = 29.5 bits (63), Expect = 7.2
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 156 EDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELPSKSQGSGDTPKTAPSQS 314
E DD +D ++SLGT E S + + PE P S+ TA S++
Sbjct: 632 ESDTDDQEEDEENSLGTEEESSKQESQPVSGGPEAPPDSRTWSQVSATASSEA 684
>BC035266-1|AAH35266.1| 794|Homo sapiens BRD4 protein protein.
Length = 794
Score = 29.1 bits (62), Expect = 9.5
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +3
Query: 108 YTTMSERLKNSAQTSNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELPSKSQGSGD 287
Y T R K Q D+I +K +K + S +SS+++ E + G
Sbjct: 670 YVTSCLRKKRKPQAEKVDVIAGSSK-MKGFSSSESESSSESSSSDSEDSETAFCTSGDFV 728
Query: 288 TPKTAPSQSHV 320
+P +P SHV
Sbjct: 729 SPGPSPYHSHV 739
>AY684169-1|AAT74627.1| 3052|Homo sapiens REV3-like, catalytic
subunit of DNA polymerase zeta (yeast) protein.
Length = 3052
Score = 29.1 bits (62), Expect = 9.5
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 150 SNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELP 263
+ ED+I+DL++ K++ ++NS +FT+ T S + P
Sbjct: 513 NKEDLIEDLSQTNKNTEKGLDNSVTSFTNESTYSMKYP 550
>AL512325-1|CAI20998.1| 3130|Homo sapiens REV3-like, catalytic
subunit of DNA polymerase zeta (yeast) protein.
Length = 3130
Score = 29.1 bits (62), Expect = 9.5
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 150 SNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELP 263
+ ED+I+DL++ K++ ++NS +FT+ T S + P
Sbjct: 591 NKEDLIEDLSQTNKNTEKGLDNSVTSFTNESTYSMKYP 628
>AL136310-2|CAI20509.1| 3130|Homo sapiens REV3-like, catalytic
subunit of DNA polymerase zeta (yeast) protein.
Length = 3130
Score = 29.1 bits (62), Expect = 9.5
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 150 SNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELP 263
+ ED+I+DL++ K++ ++NS +FT+ T S + P
Sbjct: 591 NKEDLIEDLSQTNKNTEKGLDNSVTSFTNESTYSMKYP 628
>AL080317-2|CAI19192.1| 3130|Homo sapiens REV3-like, catalytic
subunit of DNA polymerase zeta (yeast) protein.
Length = 3130
Score = 29.1 bits (62), Expect = 9.5
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 150 SNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELP 263
+ ED+I+DL++ K++ ++NS +FT+ T S + P
Sbjct: 591 NKEDLIEDLSQTNKNTEKGLDNSVTSFTNESTYSMKYP 628
>AF179429-1|AAG09403.1| 3052|Homo sapiens DNA polymerase zeta
catalytic subunit variant 2 protein.
Length = 3052
Score = 29.1 bits (62), Expect = 9.5
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 150 SNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELP 263
+ ED+I+DL++ K++ ++NS +FT+ T S + P
Sbjct: 513 NKEDLIEDLSQTNKNTEKGLDNSVTSFTNESTYSMKYP 550
>AF179428-1|AAG09402.1| 3052|Homo sapiens DNA polymerase zeta
catalytic subunit variant 1 protein.
Length = 3052
Score = 29.1 bits (62), Expect = 9.5
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 150 SNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELP 263
+ ED+I+DL++ K++ ++NS +FT+ T S + P
Sbjct: 513 NKEDLIEDLSQTNKNTEKGLDNSVTSFTNESTYSMKYP 550
>AF157476-1|AAD40184.1| 3130|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3130
Score = 29.1 bits (62), Expect = 9.5
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 150 SNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELP 263
+ ED+I+DL++ K++ ++NS +FT+ T S + P
Sbjct: 591 NKEDLIEDLSQTNKNTEKGLDNSVTSFTNESTYSMKYP 628
>AF078695-1|AAC28460.1| 3052|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3052
Score = 29.1 bits (62), Expect = 9.5
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 150 SNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELP 263
+ ED+I+DL++ K++ ++NS +FT+ T S + P
Sbjct: 513 NKEDLIEDLSQTNKNTEKGLDNSVTSFTNESTYSMKYP 550
>AF071798-1|AAC24009.1| 3130|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3130
Score = 29.1 bits (62), Expect = 9.5
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 150 SNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELP 263
+ ED+I+DL++ K++ ++NS +FT+ T S + P
Sbjct: 591 NKEDLIEDLSQTNKNTEKGLDNSVTSFTNESTYSMKYP 628
>AF058701-1|AAC24357.1| 3130|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3130
Score = 29.1 bits (62), Expect = 9.5
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 150 SNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELP 263
+ ED+I+DL++ K++ ++NS +FT+ T S + P
Sbjct: 591 NKEDLIEDLSQTNKNTEKGLDNSVTSFTNESTYSMKYP 628
>AF035537-1|AAB88486.1| 3052|Homo sapiens DNA polymerase zeta
protein.
Length = 3052
Score = 29.1 bits (62), Expect = 9.5
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 150 SNEDIIDDLTKDLKSSLGTIENSEGNFTSSETDSPELP 263
+ ED+I+DL++ K++ ++NS +FT+ T S + P
Sbjct: 513 NKEDLIEDLSQTNKNTEKGLDNSVTSFTNESTYSMKYP 550
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,128,990
Number of Sequences: 237096
Number of extensions: 1049441
Number of successful extensions: 3232
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 3030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3223
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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