Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_O04
         (558 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...   195   7e-52
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          29   0.14 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   5.1  
AY146728-1|AAO12088.1|  131|Anopheles gambiae odorant-binding pr...    23   5.1  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score =  195 bits (476), Expect = 7e-52
 Identities = 88/148 (59%), Positives = 112/148 (75%)
 Frame = +3

Query: 57  SDLSKNDIERASFAFSIYDFEGKGKIDAYNLGDLLRALNSNPTLATVXXXXXXXXXXXXX 236
           +DL   +IE+A F FS+YD+EG G++DA +LG+ LRALN NPT+  +             
Sbjct: 3   NDLKDVEIEKAQFVFSVYDWEGSGQMDAMDLGNALRALNLNPTIELIGKMGGTQKRGEKK 62

Query: 237 XXIEEFLPIYSQAKKDKDQGCYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLNDSE 416
              EEFLPI+SQ KK+K+QGC+EDFLECLKLYDKNE+G ML AELTH+L ALGE+L+D E
Sbjct: 63  IKFEEFLPIFSQVKKEKEQGCFEDFLECLKLYDKNEDGTMLLAELTHSLTALGERLDDVE 122

Query: 417 VAEITKDCMDPEDEDGMIPYAPFLKKVL 500
           +  + KDCMDPED+DG IPYAPFLKK++
Sbjct: 123 LDNVMKDCMDPEDDDGNIPYAPFLKKMM 150


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 28.7 bits (61), Expect = 0.14
 Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
 Frame = +1

Query: 1   ARGSASEDREGTNDHHTK*ATSARTTLKGHPSPSPSMI-SRAKARSMPTT*VIF*EHSTL 177
           +RGS S  R   +   +K  TS   +    P P+   + +R   R++P T V     +  
Sbjct: 433 SRGSRSRSRTSQSRSRSKTRTSRSRSRT--PLPARGHVRARLTRRTIPPTRVAA---AAA 487

Query: 178 TPH*LPSRNSVVQRRRARSNLRLKSSFPSTVRP-RKTKTR 294
            P     R ++ + RR R   R + + P+T RP R   TR
Sbjct: 488 APEGRRRRRAIARARRRRCRPRARRNPPATTRPVRHRPTR 527


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 393  GEKLNDSEVAEITKDCMDPEDEDG 464
            G K+ +  +AE+ K  +D ED+ G
Sbjct: 1250 GLKMENGVIAEVEKSQVDGEDDTG 1273


>AY146728-1|AAO12088.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP21 protein.
          Length = 131

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = +3

Query: 357 LGAELTH---TLLALGEKLNDSEVAEITKDCM 443
           LG EL     T + LG+   DSE A+ T  CM
Sbjct: 35  LGGELPEDFATKMRLGDLTLDSETAKCTIQCM 66


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 558,309
Number of Sequences: 2352
Number of extensions: 10051
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)