Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_O01
(592 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616... 42 3e-04
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039... 37 0.014
03_05_0467 - 24615243-24615384,24619166-24619450,24619516-246195... 37 0.014
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 35 0.056
02_04_0219 + 21007875-21008253,21009774-21009811,21009948-210099... 34 0.097
08_01_0126 - 1008469-1008477,1009055-1009396,1009499-1010167,101... 32 0.39
06_01_1173 + 10014391-10014678,10015478-10017245,10017333-100174... 31 0.52
03_01_0509 + 3836284-3836547,3836927-3837157,3837253-3837423,383... 31 0.52
03_02_0936 - 12528336-12528379,12528516-12528602,12528696-125288... 31 0.69
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475 30 1.2
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 30 1.6
06_03_1221 - 28514952-28518152 29 2.8
06_03_1220 - 28505306-28508497 29 2.8
05_01_0554 + 4856131-4856605,4858051-4858098,4860611-4860792,486... 29 2.8
06_03_1219 - 28491185-28494415 29 3.7
06_03_1217 - 28484007-28487237 28 4.8
05_04_0272 + 19624898-19625071,19625909-19626370,19626471-196269... 28 4.8
03_01_0125 + 977572-977879,978155-978275,979673-979846,979985-98... 28 4.8
03_01_0061 + 490037-490045,490121-490302,490551-490671,491933-49... 28 4.8
10_06_0104 + 10786613-10788040 28 6.4
08_02_1383 + 26594304-26594386,26595927-26595972,26596108-265962... 28 6.4
08_02_1477 - 27375872-27376723,27376825-27377091 27 8.5
06_01_0877 + 6728883-6729651,6729989-6730224,6730423-6730704,673... 27 8.5
>08_01_0699 -
6163662-6163680,6163865-6163943,6163979-6164048,
6164151-6164266,6164656-6164734,6164831-6164921,
6165006-6165084,6165161-6165248,6165371-6165454,
6165544-6165591,6166118-6166192,6166286-6166362,
6166460-6166548,6166711-6166749,6167133-6167206,
6167496-6167588,6167820-6167917,6168100-6168172,
6168322-6168406,6168513-6168634,6169307-6169414,
6169537-6169608
Length = 585
Score = 42.3 bits (95), Expect = 3e-04
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Frame = +1
Query: 160 DKSIGNYFVDADGNEFLDAFTQISSQPVGYNHPELLSAFEDQHN----LRALVNRPALGV 327
D+S G+Y D +G +++DA + S +G N P L+ A DQ N + NR
Sbjct: 126 DRSEGSYVYDINGKKYIDALAGLWSTALGGNEPRLIKAATDQLNKLPFYHSFWNRTTK-- 183
Query: 328 FPSADWPEKLKNVLLSV-APEQFNSVVTMMCGSCANENAYKAVFMWYRQRERGGKLEF 498
PS D L N +LS+ + + GS AN++ K V+ + R K +F
Sbjct: 184 -PSLD----LANEILSMFTAREMGKIFFTNSGSEANDSQVKLVWYYNNALGRPNKKKF 236
>04_04_1143 +
31202901-31203034,31203312-31203345,31203913-31203985,
31204090-31204187,31204356-31204448,31205081-31205154,
31205680-31205768,31205859-31205935,31206016-31206090,
31206438-31206485,31206571-31206654,31206734-31206821,
31206896-31206974,31207072-31207162,31207724-31207802,
31208219-31208334,31208430-31208488,31210292-31210342,
31211418-31211444,31211725-31211809,31211952-31212024,
31212154-31212251,31212385-31212477,31212972-31213045,
31213258-31213296,31213410-31213498,31213583-31213707,
31213750-31213824,31214225-31214272,31214359-31214442,
31214574-31214661,31214762-31214840,31214930-31215020,
31215113-31215191,31215485-31215600,31215910-31215987
Length = 960
Score = 36.7 bits (81), Expect = 0.014
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Frame = +1
Query: 160 DKSIGNYFVDADGNEFLDAFTQISSQPVGYNHPELLSAFEDQ-HNLRALVNRPALGVFPS 336
++S G+Y D DG ++LD+ + +G + P L+ A +Q H L + PS
Sbjct: 515 ERSEGSYVYDIDGKKYLDSLAGLWCTALGGSEPRLVKAATEQLHKLPFYHSFWNRTTKPS 574
Query: 337 ADWPEKLKNVLLSVAPEQFNSVVTMMCGSCANENAYKAVFMWYRQRERGGKLEF 498
D ++L ++ + + V GS AN++ K V+ + R K +F
Sbjct: 575 LDLAKELLSMFTA---REMGKVFFTNSGSEANDSQVKLVWYYNNALGRPDKKKF 625
Score = 34.3 bits (75), Expect = 0.074
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +1
Query: 172 GNYFVDADGNEFLDAFTQISSQPVGYNHPELLSAFEDQHNLRALVNRPALGVF--PSADW 345
G+Y D+ GN++LD + +G + P L+ A DQ N P F +A
Sbjct: 57 GSYVYDSKGNKYLDTLAGLWCTALGGSEPRLVKAATDQLN-----KLPFYHSFWNSTAKP 111
Query: 346 PEKLKNVLLSV-APEQFNSVVTMMCGSCANENAYKAVFMWYRQRERG 483
P L L+S+ ++ V GS AN++ K V WY G
Sbjct: 112 PLDLAEELISMFTAKEMGKVFFTNSGSEANDSQVKLV--WYYNNALG 156
>03_05_0467 -
24615243-24615384,24619166-24619450,24619516-24619596,
24619807-24619904,24620038-24620190,24620705-24620760,
24620844-24621003,24621416-24621646,24621795-24621903,
24622642-24622799
Length = 490
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +1
Query: 157 YDKSIGNYFVDADGNEFLDAFTQISSQPVGYNHPELLSAFEDQHNLRALVNR 312
+ K G++ +D +GN+++D + S+ G+ HP++L A ++Q L +R
Sbjct: 61 FSKGEGSHILDPEGNKYIDFLSAYSAVNQGHCHPKVLRALKEQAERLTLSSR 112
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 34.7 bits (76), Expect = 0.056
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 148 FADYDKSIGNYFVDADGNEFLDAFTQISSQPVGYNHPELLSAFEDQ 285
+ DY K Y D DG +LDAF I++ G+ HP+++ A +Q
Sbjct: 93 YRDYHK----YLFDEDGRRYLDAFGGIATVCCGHCHPDVVEAMVNQ 134
>02_04_0219 +
21007875-21008253,21009774-21009811,21009948-21009976,
21010398-21010443,21010567-21010681,21010790-21010857,
21011780-21011974,21012180-21012281,21012889-21013119,
21013514-21013684
Length = 457
Score = 33.9 bits (74), Expect = 0.097
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +1
Query: 139 VQLFADYDKSIGNYFVDADGNEFLDAFTQISSQPVGYNHPELLSAFEDQHNLRALVNRPA 318
VQ+ +D D +I ++ +DG F+D F + Q + + E N A RP
Sbjct: 178 VQVLSDLDLAISKAYITSDGGWFMDVFHVVDKQGQKVTDEKTIKHIEKAGNAAAAEERPV 237
Query: 319 LGV 327
+ V
Sbjct: 238 VTV 240
>08_01_0126 -
1008469-1008477,1009055-1009396,1009499-1010167,
1010264-1010446,1010491-1010550,1010551-1010649
Length = 453
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 136 AVQLFADYDKSIGNYFVDADGNEFLDAF 219
AVQ+ AD D SI ++ +DG F+D F
Sbjct: 66 AVQVLADLDLSINKAYISSDGRWFMDVF 93
>06_01_1173 + 10014391-10014678,10015478-10017245,10017333-10017436,
10017632-10017706,10017887-10017918,10019396-10019482,
10020848-10021294,10021477-10021630,10022203-10022329,
10022547-10022632,10022719-10022790,10023083-10023286,
10023732-10024049
Length = 1253
Score = 31.5 bits (68), Expect = 0.52
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 259 ELLSAFEDQHNLRALVNRPALGVFPSADWPEKL-KNVLLSVAPEQFNSVVTMMCGSCANE 435
EL++A Q L ++ A+G ADW E L KN+++ E+ ++ + C N+
Sbjct: 1131 ELITAINPQQGLMEYIDLAAIGGEGKADWDEILDKNLIVGNIAEEVR-ILADVAYRCVNK 1189
Query: 436 NAYK 447
N K
Sbjct: 1190 NPKK 1193
>03_01_0509 +
3836284-3836547,3836927-3837157,3837253-3837423,
3838379-3838522,3838640-3838819,3838926-3839151,
3839326-3839439,3839541-3839627,3839711-3839754
Length = 486
Score = 31.5 bits (68), Expect = 0.52
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 178 YFVDADGNEFLDAFTQISSQPVGYNHPELLSAFEDQHNL 294
Y D +G +LD F I + G+ HP++++A +Q L
Sbjct: 98 YLYDENGKRYLDCFGGIVTVSCGHCHPDIVNAVVEQTKL 136
>03_02_0936 -
12528336-12528379,12528516-12528602,12528696-12528809,
12528895-12529120,12529200-12529523,12529603-12529773,
12529870-12530100,12530291-12530479,12531176-12531178
Length = 462
Score = 31.1 bits (67), Expect = 0.69
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Frame = +1
Query: 178 YFVDADGNEFLDAFTQISSQPVGYNHPELLSAFED-----QHNLRALVNRPALGVFPSA- 339
Y D G +LDAF I++ G+ HP+++ A QH+ +N A+ F A
Sbjct: 74 YLFDERGRRYLDAFAGIATVCCGHCHPDVVGAIAAQAGRLQHSTVLYLNH-AIADFAEAL 132
Query: 340 --DWPEKLKNVLLSVAPEQFNSVVTMM 414
P LK V + + + N + MM
Sbjct: 133 ASKMPGDLKVVFFTNSGTEANELAIMM 159
>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
Length = 465
Score = 30.3 bits (65), Expect = 1.2
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 11/106 (10%)
Frame = +1
Query: 1 ARGKGSRCLSSILLEEPQKPSIKTSIPGPKSQKLMQELSAIQQA----GAVQLFADYDKS 168
AR + SR + + P P ++ P + +ELSA +A A + Y++S
Sbjct: 22 ARLRPSRVTACLATPTPTPPPPTSAPLAPAAAAARRELSAASRAVVEDEARYIVGTYNRS 81
Query: 169 I-------GNYFVDADGNEFLDAFTQISSQPVGYNHPELLSAFEDQ 285
G DADG E+LD I+ +G+ P+ ++A Q
Sbjct: 82 RVVLVAGRGCKLYDADGREYLDMAAGIAVNALGHADPDWVAAVSAQ 127
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 29.9 bits (64), Expect = 1.6
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 11/106 (10%)
Frame = +1
Query: 1 ARGKGSRCLSSILLEEPQKPSIKTSIPGPKSQKLMQELSAIQQA----GAVQLFADYDKS 168
AR + SR + + P P TS P + +ELSA +A A + Y++S
Sbjct: 27 ARLRPSRVTACLATPTPTPPP-PTSAPLAPAAAARRELSAASRAVVEDEARYIVGTYNRS 85
Query: 169 I-------GNYFVDADGNEFLDAFTQISSQPVGYNHPELLSAFEDQ 285
G DADG E+LD I+ +G+ P+ ++A Q
Sbjct: 86 RVVLVAGRGCKLYDADGREYLDMAAGIAVNALGHADPDWVAAVSAQ 131
>06_03_1221 - 28514952-28518152
Length = 1066
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 322 GVFPSADWPEKLKNVLLSVAPEQFNSVVTMMCGSC 426
G FPSA W + V L+ + F+ + +C SC
Sbjct: 168 GRFPSAIWEHTPRLVSLNASNNSFHGSIPSLCASC 202
>06_03_1220 - 28505306-28508497
Length = 1063
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 322 GVFPSADWPEKLKNVLLSVAPEQFNSVVTMMCGSC 426
G FPSA W + V L+ + F+ + +C SC
Sbjct: 162 GQFPSAIWEHTPRLVSLNASNNSFHGTIPSLCVSC 196
>05_01_0554 +
4856131-4856605,4858051-4858098,4860611-4860792,
4861409-4863136
Length = 810
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +2
Query: 479 VVVNLNLH---PKRLVLACSTNLPAHLIYRC 562
+V+ L L+ P++L L C+T+ P HL RC
Sbjct: 760 IVLALRLYRSAPEQLALRCTTSAPIHLALRC 790
>06_03_1219 - 28491185-28494415
Length = 1076
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 322 GVFPSADWPEKLKNVLLSVAPEQFNSVVTMMCGSC 426
G FPSA W + V L+ + F + +C SC
Sbjct: 166 GQFPSAIWEHTPRLVSLNASNNSFRGTIPSLCVSC 200
>06_03_1217 - 28484007-28487237
Length = 1076
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 322 GVFPSADWPEKLKNVLLSVAPEQFNSVVTMMCGSC 426
G FPSA W + V L+ + F+ + +C SC
Sbjct: 170 GQFPSAIWEHTPRLVSLNASNNSFHGSIPSLCVSC 204
>05_04_0272 +
19624898-19625071,19625909-19626370,19626471-19626905,
19626992-19627237,19627318-19628085,19628245-19628417,
19629337-19629440,19629525-19630127,19630210-19630214
Length = 989
Score = 28.3 bits (60), Expect = 4.8
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Frame = +1
Query: 340 DWPEKLKNVLLSVAPEQFNSVVTMMCGSCANENAYKAVF------MWYRQRERGGKLEFT 501
+WPE+ +N+ V Q NS++ M C +E++ R RER +
Sbjct: 634 NWPERDENIANIVFHNQRNSMMAMDASDCDSEHSDSVPSDGISGKEMMRSRER-SSWYLS 692
Query: 502 PEEISSCMLNQPPGSPNLSMLSFEG 576
EI +++QPP S+ S G
Sbjct: 693 NAEIFFYVIDQPPAKSGESLSSSGG 717
>03_01_0125 +
977572-977879,978155-978275,979673-979846,979985-980148,
980245-980332,980426-980479,980571-980651,980895-981068
Length = 387
Score = 28.3 bits (60), Expect = 4.8
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +2
Query: 77 YLDLNHKN*CKSCPQFSKPALSSFSPIMISPSAIILLMRMVMSF*THSHKFLH 235
YLDL+ K SCP+F+K +P +I S + ++R V HSH+ LH
Sbjct: 120 YLDLDLKKFMDSCPEFAK------NPTLIK-SYLYQILRGVAY--CHSHRVLH 163
>03_01_0061 +
490037-490045,490121-490302,490551-490671,491933-492106,
492246-492409,492506-492593,492687-492740,492837-492917,
493075-493083
Length = 293
Score = 28.3 bits (60), Expect = 4.8
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +2
Query: 77 YLDLNHKN*CKSCPQFSKPALSSFSPIMISPSAIILLMRMVMSF*THSHKFLH 235
YLDL+ K SCP+F+K +P +I S + ++R V HSH+ LH
Sbjct: 81 YLDLDLKKFMDSCPEFAK------NPTLIK-SYLYQILRGVAY--CHSHRVLH 124
>10_06_0104 + 10786613-10788040
Length = 475
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 223 QISSQPV--GYNHPELLSAFEDQHNLRALVNRPALG 324
++S+ P+ GY+HP L+ D+ +L+ L P +G
Sbjct: 30 RMSAPPLSGGYDHPGLIPGLPDEISLQILARMPRMG 65
>08_02_1383 +
26594304-26594386,26595927-26595972,26596108-26596222,
26596645-26596712,26596814-26597440,26597527-26597631,
26597715-26598062
Length = 463
Score = 27.9 bits (59), Expect = 6.4
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Frame = +1
Query: 136 AVQLFADYDKSIGNYFVDADGNEFLDAFTQISSQPVGYNHPE----LLSAFEDQHNLRAL 303
AVQ+ D + I ++ +DGN F+D F + E + E + L
Sbjct: 56 AVQVLVDLNLVITKAYISSDGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVLP 115
Query: 304 VNRPALGVFPSAD 342
+ PA G PS +
Sbjct: 116 ASSPAGGAAPSEE 128
>08_02_1477 - 27375872-27376723,27376825-27377091
Length = 372
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 392 NCSGATDNNTFFNFSGQSAEGNTP 321
N S A NN N SG+SAE TP
Sbjct: 235 NASSAAGNNNNNNCSGESAEAATP 258
>06_01_0877 +
6728883-6729651,6729989-6730224,6730423-6730704,
6731297-6731335,6731719-6731826,6731873-6732220
Length = 593
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = -3
Query: 587 P*KLPSNDSIDRLGEPGGWLSMQELISSGVNSSLPPRSL*RYHMNTALYAFSLAQDPHII 408
P L SI +G PGG L ++ +G P H N L L +DP I+
Sbjct: 169 PCGLIQGSSITIIGTPGGLLGSFKIELTGATVPGEPDPPIVLHYNVRLLGDKLTEDPVIV 228
Query: 407 VTT 399
T
Sbjct: 229 QNT 231
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.132 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,041,504
Number of Sequences: 37544
Number of extensions: 318981
Number of successful extensions: 970
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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