Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_O01
         (592 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    24   4.2  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   5.6  
EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein A...    23   5.6  
DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    23   9.8  

>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +2

Query: 38  CWRNL-RNHQSKHRYLDLNHKN*CKSC 115
           C+R L R H S+  +  +NH N C  C
Sbjct: 406 CYRCLERGHVSRDCHSPVNHSNVCIRC 432


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 13/57 (22%), Positives = 24/57 (42%)
 Frame = +1

Query: 256 PELLSAFEDQHNLRALVNRPALGVFPSADWPEKLKNVLLSVAPEQFNSVVTMMCGSC 426
           P   ++   ++N R    R    +   ADW    +   +  A + FN+++T    SC
Sbjct: 267 PSAPNSLSVRYNFRLTDYRKLNSILSRADWSFFYQCTSVDEAVQSFNALLTSALLSC 323


>EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein AA
           protein.
          Length = 62

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 202 HYHPHQQNNCRWTYHNRRK 146
           H+H  QQN+ R  +H++++
Sbjct: 28  HHHQQQQNHQRMPHHHQQQ 46


>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = +1

Query: 427 ANENAYKAVFMWYRQRERGGKLEFTPEEISSCMLNQPPGSPNLSM 561
           A +N  +AVF+        G+L    + +   ++  P G+P+L +
Sbjct: 297 APDNPIRAVFVASDSNHMLGELNDALKRMDVTVVRHPDGNPHLDL 341


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.132    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,735
Number of Sequences: 2352
Number of extensions: 11716
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)