Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_O01
(592 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69664-4|CAA93517.1| 483|Caenorhabditis elegans Hypothetical pr... 212 1e-55
U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical pr... 38 0.005
U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 28 4.3
AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical ... 28 4.3
U58757-5|AAC47919.3| 555|Caenorhabditis elegans Hypothetical pr... 28 5.7
AC084197-25|AAK68591.1| 609|Caenorhabditis elegans Hypothetical... 28 5.7
Z98851-3|CAB11538.2| 659|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z70310-7|CAA94364.1| 607|Caenorhabditis elegans Hypothetical pr... 27 10.0
AF300704-1|AAG24400.1| 622|Caenorhabditis elegans incenp-like p... 27 10.0
AC025716-5|AAK39616.1| 622|Caenorhabditis elegans Incenp homolo... 27 10.0
>Z69664-4|CAA93517.1| 483|Caenorhabditis elegans Hypothetical
protein K04D7.3 protein.
Length = 483
Score = 212 bits (518), Expect = 1e-55
Identities = 98/191 (51%), Positives = 130/191 (68%)
Frame = +1
Query: 19 RCLSSILLEEPQKPSIKTSIPGPKSQKLMQELSAIQQAGAVQLFADYDKSIGNYFVDADG 198
R +S+I EP PSI TSIPGPKS+ L QE+ + Q +V+ DY+KS GNY VDADG
Sbjct: 15 RGVSAIANAEPSGPSISTSIPGPKSKALKQEMDKVHQTTSVRFHVDYEKSFGNYVVDADG 74
Query: 199 NEFLDAFTQISSQPVGYNHPELLSAFEDQHNLRALVNRPALGVFPSADWPEKLKNVLLSV 378
N LD +TQISS P+GYNHP+L+ H + +LV+RPALG FP D+ + + + L S+
Sbjct: 75 NALLDVYTQISSLPLGYNHPDLVKVASQPHLITSLVSRPALGSFPRTDFADGISHALTSI 134
Query: 379 APEQFNSVVTMMCGSCANENAYKAVFMWYRQRERGGKLEFTPEEISSCMLNQPPGSPNLS 558
AP+ +V TM+CG+ ANENA K F+WY+ + RGG L + SCM Q PG+PNLS
Sbjct: 135 APKGLKAVQTMLCGTSANENAIKTAFIWYQAQRRGG-LGPDALHLESCMNQQKPGTPNLS 193
Query: 559 MLSFEGSFHGR 591
++ FEG+FHGR
Sbjct: 194 VMGFEGAFHGR 204
>U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical
protein T09B4.8 protein.
Length = 444
Score = 37.9 bits (84), Expect = 0.005
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Frame = +1
Query: 103 MQELSAIQQAGAVQLFADY---DKSIGNYFVDADGNEFLDAFTQISSQPVGYNHPELLSA 273
+Q L + G V + D K + D++G ++LD F I + VG+ HP++ +A
Sbjct: 4 VQALRPLLPKGHVTYYKDQLLITKGEKQFLFDSNGKKYLDFFGGIVTVSVGHCHPKINAA 63
Query: 274 FEDQHNLRALVNRPALGVFPSADWPEKLKNVLLSVAPEQFNSVVTMMCGSCANENA 441
+Q + P ++ EK LLS P + NSV + GS AN+ A
Sbjct: 64 LTEQAQ-KLWHTTSIYHTEPIYEYAEK----LLSKFPSKLNSVFFVNSGSEANDLA 114
>U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical
protein F33G12.5 protein.
Length = 928
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/69 (27%), Positives = 37/69 (53%)
Frame = +1
Query: 193 DGNEFLDAFTQISSQPVGYNHPELLSAFEDQHNLRALVNRPALGVFPSADWPEKLKNVLL 372
+GNE+ A+TQ+ +Q H EL + + H+ + VN + V + + +L+N L
Sbjct: 90 NGNEWYQAYTQLKTQ-----HDELCAHYSQLHSAYSQVNANGIHV-DTENQIVQLQNALS 143
Query: 373 SVAPEQFNS 399
++ E+ +S
Sbjct: 144 AMVEEKVSS 152
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein
H06O01.2 protein.
Length = 1461
Score = 28.3 bits (60), Expect = 4.3
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +1
Query: 106 QELSAIQQAGAVQLFADYDKSIGNYFVDADGNEFLDAFTQISSQPVGYNHPELLSAFE 279
QELSAI + GAV+LF + + VD D + A T+ + + V ELLS+F+
Sbjct: 886 QELSAILKFGAVELFKEKEGEEQEPEVDID-RILMGAETREAEEEV-MKENELLSSFK 941
>AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical
protein T24A6.11 protein.
Length = 359
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -3
Query: 557 DRLGEPGGWLSMQELISSGVNSSLPPRSL*RYHMNTALYAFSLAQDPHIIVTTLLNCSGA 378
DRL PGG + +L+S+ N SL R + + L + + ++VT +L C A
Sbjct: 220 DRLTTPGGHEIVPDLMSTLFNVSLSFIRQIRSRVVSKLIELEITDEEFLLVTVILFCDPA 279
>U58757-5|AAC47919.3| 555|Caenorhabditis elegans Hypothetical
protein C01B10.9 protein.
Length = 555
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 136 AVQLFADYDKSIGNYFVDADGNEFLDAFTQISSQPV 243
A LF + +GNYF DAD + D F + V
Sbjct: 76 ATGLFEEEHGIVGNYFFDADTKKAFDYFNSTGKEGV 111
>AC084197-25|AAK68591.1| 609|Caenorhabditis elegans Hypothetical
protein Y73B6BL.19 protein.
Length = 609
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 157 YDKSIGNYFVDADGNEFLDAFTQISSQPVGYNHPELLSAFEDQ 285
YD+ G YF D D + F T + + Y E L A++++
Sbjct: 81 YDEDTGEYFFDRDPDIFRHILTFYRTGKLHYPRHECLVAYDEE 123
>Z98851-3|CAB11538.2| 659|Caenorhabditis elegans Hypothetical
protein H12I19.4 protein.
Length = 659
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +1
Query: 85 PKSQKLMQ-ELSAIQQAGAVQLFADYDKSIGNYFVDADGNEFLDAFTQISSQPVGYNHPE 261
P+ K ++ + G V + +Y K+ GN V A GN ++ F YN+ E
Sbjct: 399 PRKDKCVETSFQELVDNGYVFDYCNYPKANGNLSVMALGNSYVLNFNDHIRSQFNYNYSE 458
Query: 262 LLSAF 276
S F
Sbjct: 459 WRSLF 463
>Z70310-7|CAA94364.1| 607|Caenorhabditis elegans Hypothetical
protein R11A8.4 protein.
Length = 607
Score = 27.1 bits (57), Expect = 10.0
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +1
Query: 253 HPELLSAFEDQHNLRALVNRPALGVFPSADWPEKLKNVLLSVAPEQFNSVVTMMCGSCAN 432
HP LLS E H+ + + VFP A+ L+ + L V + CGS +
Sbjct: 483 HPRLLSITEMLHDNKCVAISAHQTVFPGAECSFDLETLKL-VRDVHHETHCESSCGSSCS 541
Query: 433 ENA 441
NA
Sbjct: 542 SNA 544
>AF300704-1|AAG24400.1| 622|Caenorhabditis elegans incenp-like
protein ICP-1 protein.
Length = 622
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 46 EPQKPSIKTSIPGPKSQKLMQELSAIQQAGAVQLFADYDKSIGN 177
+P +P+IK PK + E+S A ++FAD K + +
Sbjct: 11 KPAEPTIKLFSSIPKISSIFDEVSEAHDDAAAKVFADLYKRMSS 54
>AC025716-5|AAK39616.1| 622|Caenorhabditis elegans Incenp homolog
protein 1 protein.
Length = 622
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 46 EPQKPSIKTSIPGPKSQKLMQELSAIQQAGAVQLFADYDKSIGN 177
+P +P+IK PK + E+S A ++FAD K + +
Sbjct: 11 KPAEPTIKLFSSIPKISSIFDEVSEAHDDAAAKVFADLYKRMSS 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.132 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,645,957
Number of Sequences: 27780
Number of extensions: 278862
Number of successful extensions: 750
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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