Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_N24
         (84 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY195588-1|AAP57714.1|  406|Homo sapiens UEF3 protein.                 30   1.5  
AL834232-1|CAD38910.1|  499|Homo sapiens hypothetical protein pr...    30   1.5  
AK097204-1|BAC04975.1|  695|Homo sapiens protein ( Homo sapiens ...    30   1.5  
AF474973-1|AAQ05771.1| 1584|Homo sapiens UEF1 protein.                 30   1.5  
AB095926-1|BAC23102.1| 1587|Homo sapiens KIAA2005 protein protein.     30   1.5  

>AY195588-1|AAP57714.1|  406|Homo sapiens UEF3 protein.
          Length = 406

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +3

Query: 21  VSIAVGPLRSGRNIASLSRYL 83
           +S+  GPLRSGRNI  +S YL
Sbjct: 371 ISVYSGPLRSGRNIERVSFYL 391


>AL834232-1|CAD38910.1|  499|Homo sapiens hypothetical protein
           protein.
          Length = 499

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +3

Query: 21  VSIAVGPLRSGRNIASLSRYL 83
           +S+  GPLRSGRNI  +S YL
Sbjct: 464 ISVYSGPLRSGRNIERVSFYL 484


>AK097204-1|BAC04975.1|  695|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39885 fis, clone SPLEN2016356. ).
          Length = 695

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +3

Query: 21  VSIAVGPLRSGRNIASLSRYL 83
           +S+  GPLRSGRNI  +S YL
Sbjct: 660 ISVYSGPLRSGRNIERVSFYL 680


>AF474973-1|AAQ05771.1| 1584|Homo sapiens UEF1 protein.
          Length = 1584

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +3

Query: 21   VSIAVGPLRSGRNIASLSRYL 83
            +S+  GPLRSGRNI  +S YL
Sbjct: 1549 ISVYSGPLRSGRNIERVSFYL 1569


>AB095926-1|BAC23102.1| 1587|Homo sapiens KIAA2005 protein protein.
          Length = 1587

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +3

Query: 21   VSIAVGPLRSGRNIASLSRYL 83
            +S+  GPLRSGRNI  +S YL
Sbjct: 1552 ISVYSGPLRSGRNIERVSFYL 1572


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,855,477
Number of Sequences: 237096
Number of extensions: 50290
Number of successful extensions: 160
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 76,859,062
effective HSP length: 9
effective length of database: 74,725,198
effective search space used: 1345053564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)