Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_N23
         (607 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ...    43   4e-04
BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p pro...    43   4e-04
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA...    43   4e-04
AY118462-1|AAM49831.1|  625|Drosophila melanogaster GM01690p pro...    31   0.92 
AE014134-3349|AAF53970.1|  625|Drosophila melanogaster CG9247-PA...    31   0.92 
AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-P...    31   1.2  

>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
            acid-bindingglycoprotein protein.
          Length = 3351

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 32/122 (26%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
 Frame = +1

Query: 70   DLVMPLITQLVDNLKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYER 249
            +L+ P I  + ++L+S+  +D+++ +        YP L  +D      K+++       +
Sbjct: 3076 NLIAPAINDIRESLRSRGFSDVQVGVIVFEETKRYPALLTSD----GGKINYKGNVADVK 3131

Query: 250  MPFVKTGCDTFDKY---EKNVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPFRAGAVKH 408
            +  +K+ CD   +    EK ++D  ++LK I  G++     EK+    LD PFRAGA K 
Sbjct: 3132 LAGIKSFCDNCVEQIITEKRILDIYNSLKEIVKGIAPQA-DEKAFQLALDYPFRAGAAKS 3190

Query: 409  VL 414
            ++
Sbjct: 3191 II 3192


>BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p protein.
          Length = 1074

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 32/122 (26%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
 Frame = +1

Query: 70   DLVMPLITQLVDNLKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYER 249
            +L+ P I  + ++L+S+  +D+++ +        YP L  +D      K+++       +
Sbjct: 799  NLIAPAINDIRESLRSRGFSDVQVGVIVFEETKRYPALLTSD----GGKINYKGNVADVK 854

Query: 250  MPFVKTGCDTFDKY---EKNVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPFRAGAVKH 408
            +  +K+ CD   +    EK ++D  ++LK I  G++     EK+    LD PFRAGA K 
Sbjct: 855  LAGIKSFCDNCVEQIITEKRILDIYNSLKEIVKGIAPQA-DEKAFQLALDYPFRAGAAKS 913

Query: 409  VL 414
            ++
Sbjct: 914  II 915


>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
            protein.
          Length = 3351

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 32/122 (26%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
 Frame = +1

Query: 70   DLVMPLITQLVDNLKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYER 249
            +L+ P I  + ++L+S+  +D+++ +        YP L  +D      K+++       +
Sbjct: 3076 NLIAPAINDIRESLRSRGFSDVQVGVIVFEETKRYPALLTSD----GGKINYKGNVADVK 3131

Query: 250  MPFVKTGCDTFDKY---EKNVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPFRAGAVKH 408
            +  +K+ CD   +    EK ++D  ++LK I  G++     EK+    LD PFRAGA K 
Sbjct: 3132 LAGIKSFCDNCVEQIITEKRILDIYNSLKEIVKGIAPQA-DEKAFQLALDYPFRAGAAKS 3190

Query: 409  VL 414
            ++
Sbjct: 3191 II 3192


>AY118462-1|AAM49831.1|  625|Drosophila melanogaster GM01690p
           protein.
          Length = 625

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
 Frame = +1

Query: 67  KDLVMPLITQLVDNLKSKQITDIKIYL-AGH---TSKYPYPILYDTDLKLKSSKLHFDDK 234
           +DL++P + +L+DN   K++T   I L   H     +  +P++    L L    L   D 
Sbjct: 170 RDLLLPKLRELLDNGLYKEVTQWSISLQLTHEFDMLELAFPLIAIEKLPLAEEYL---DH 226

Query: 235 ERYERMPFVKTGCDTFDKYEKNVIDFMDTLKIK---LGLSNIVLSEKSLLDLPFR 390
              +R+PFVK   D+    EK+V++  + L  +   L +S+ VLS + +  +  R
Sbjct: 227 ATQQRLPFVKF-LDSLLHKEKSVLELCEHLLDRYKNLKISHNVLSYRPMAKIVAR 280


>AE014134-3349|AAF53970.1|  625|Drosophila melanogaster CG9247-PA
           protein.
          Length = 625

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
 Frame = +1

Query: 67  KDLVMPLITQLVDNLKSKQITDIKIYL-AGH---TSKYPYPILYDTDLKLKSSKLHFDDK 234
           +DL++P + +L+DN   K++T   I L   H     +  +P++    L L    L   D 
Sbjct: 170 RDLLLPKLRELLDNGLYKEVTQWSISLQLTHEFDMLELAFPLIAIEKLPLAEEYL---DH 226

Query: 235 ERYERMPFVKTGCDTFDKYEKNVIDFMDTLKIK---LGLSNIVLSEKSLLDLPFR 390
              +R+PFVK   D+    EK+V++  + L  +   L +S+ VLS + +  +  R
Sbjct: 227 ATQQRLPFVKF-LDSLLHKEKSVLELCEHLLDRYKNLKISHNVLSYRPMAKIVAR 280


>AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-PB
            protein.
          Length = 4129

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = -3

Query: 404  LTAPARNGRSRSDFSLKTILDKPSFILSVSIKSITFFSYLSNVSHPVLTKGI 249
            +TA    GR+  DF+L  +++KP+FI+    +SI  +     VS  VL  G+
Sbjct: 2002 ITATNSEGRAAVDFNLAVLVEKPTFIVQPESQSIHDY---RPVSTKVLVHGV 2050


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.135    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,889,690
Number of Sequences: 53049
Number of extensions: 497454
Number of successful extensions: 1109
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)