Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_N23
         (607 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    25   0.44 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    25   0.44 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   1.8  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   3.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   3.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   5.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   9.4  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 16/74 (21%), Positives = 33/74 (44%)
 Frame = +1

Query: 100 VDNLKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDT 279
           +D L+     D +I +  + ++  Y ILYD +   +  +  F ++ER+  +  +      
Sbjct: 361 LDLLREADFKDTEILIGNNENEGTYFILYDFNDIFEKDQASFLERERF--LGIINNIFKN 418

Query: 280 FDKYEKNVIDFMDT 321
             + E+  I F  T
Sbjct: 419 MSQIEREAITFQYT 432


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 16/74 (21%), Positives = 33/74 (44%)
 Frame = +1

Query: 100 VDNLKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDT 279
           +D L+     D +I +  + ++  Y ILYD +   +  +  F ++ER+  +  +      
Sbjct: 361 LDLLREADFKDTEILIGNNENEGTYFILYDFNDIFEKDQASFLERERF--LGIINNIFKN 418

Query: 280 FDKYEKNVIDFMDT 321
             + E+  I F  T
Sbjct: 419 MSQIEREAITFQYT 432


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 146 SRDTHLNIPTLSYTILI*N 202
           +R THLN    SYTI+I N
Sbjct: 473 ARFTHLNHADFSYTIVINN 491


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 37   ETTQSNEQSYKDLVMPLITQLVDNLKSKQITDIKIYLAGH 156
            +T    +QS +  V+P  T L   +K      IK  L GH
Sbjct: 1001 QTANIKQQSPQQHVLPGKTLLASQIKLVSPGQIKSLLTGH 1040


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -2

Query: 447 ELIDARLRHCQENVFNSTGAEWKIQKRLFTQNNIGQT 337
           EL++A L+  Q         E +IQK+  T N I +T
Sbjct: 766 ELVEAILKRVQTPFDPDVPIELQIQKQSHTPNGIVKT 802


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = +1

Query: 115 SKQITDIKIYLAGHTSKYPYPILYDTDLKL 204
           S + TD+++ +A     +P+  + D  L+L
Sbjct: 278 SSEATDLRMGVASFCKAFPWHFVVDRQLEL 307


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -1

Query: 361 HSKQYWTNQVLF*VYP 314
           ++K +W N + + VYP
Sbjct: 20  NNKGWWKNAIFYQVYP 35


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.135    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,681
Number of Sequences: 438
Number of extensions: 3323
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)