Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_N21
         (441 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036796-1|AAH36796.1|  340|Homo sapiens SVOP-like protein.            30   4.1  
Z98883-2|CAM26442.1|  760|Homo sapiens phosphatidylinositol glyc...    29   5.4  
Z98883-1|CAB56148.2|  581|Homo sapiens phosphatidylinositol glyc...    29   5.4  
BC006377-1|AAH06377.1|  760|Homo sapiens phosphatidylinositol gl...    29   5.4  
AF030177-1|AAC32661.1|  581|Homo sapiens N-acetylglucosaminyl tr...    29   5.4  
AE006464-3|AAK61235.1|  581|Homo sapiens N-acetylglucosamyl tran...    29   5.4  
AB003723-1|BAA24948.1|  581|Homo sapiens GPI1 protein.                 29   5.4  

>BC036796-1|AAH36796.1|  340|Homo sapiens SVOP-like protein.
          Length = 340

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
 Frame = -1

Query: 321 LTIGCALLLTIHLALFSDSF----FCWLLFVCKNCSFSHIYIYTAQVY 190
           +T+GC  L  + L + + S     F ++L      +F+ +YIYTA+VY
Sbjct: 224 ITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVY 271


>Z98883-2|CAM26442.1|  760|Homo sapiens phosphatidylinositol glycan
           anchor biosynthesis, class Q protein.
          Length = 760

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -3

Query: 220 SYIHIYCASIHFIAYL*ALKRHLILDISKQNTTDVIALVT-RIYKFFPYRVSLNATK 53
           SYIH+    +  I +   L   L L ++    +D+IAL+T  IY F+ Y   L   K
Sbjct: 357 SYIHLMSPFVEHILWHVGLSACLGLTVALSLLSDIIALLTFHIYCFYVYGARLYCLK 413


>Z98883-1|CAB56148.2|  581|Homo sapiens phosphatidylinositol glycan
           anchor biosynthesis, class Q protein.
          Length = 581

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -3

Query: 220 SYIHIYCASIHFIAYL*ALKRHLILDISKQNTTDVIALVT-RIYKFFPYRVSLNATK 53
           SYIH+    +  I +   L   L L ++    +D+IAL+T  IY F+ Y   L   K
Sbjct: 357 SYIHLMSPFVEHILWHVGLSACLGLTVALSLLSDIIALLTFHIYCFYVYGARLYCLK 413


>BC006377-1|AAH06377.1|  760|Homo sapiens phosphatidylinositol
           glycan anchor biosynthesis, class Q protein.
          Length = 760

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -3

Query: 220 SYIHIYCASIHFIAYL*ALKRHLILDISKQNTTDVIALVT-RIYKFFPYRVSLNATK 53
           SYIH+    +  I +   L   L L ++    +D+IAL+T  IY F+ Y   L   K
Sbjct: 357 SYIHLMSPFVEHILWHVGLSACLGLTVALSLLSDIIALLTFHIYCFYVYGARLYCLK 413


>AF030177-1|AAC32661.1|  581|Homo sapiens N-acetylglucosaminyl
           transferase component Gpi1 protein.
          Length = 581

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -3

Query: 220 SYIHIYCASIHFIAYL*ALKRHLILDISKQNTTDVIALVT-RIYKFFPYRVSLNATK 53
           SYIH+    +  I +   L   L L ++    +D+IAL+T  IY F+ Y   L   K
Sbjct: 357 SYIHLMSPFVEHILWHVGLSACLGLTVALSLLSDIIALLTFHIYCFYVYGARLYCLK 413


>AE006464-3|AAK61235.1|  581|Homo sapiens N-acetylglucosamyl
           transferase component GPI1 protein.
          Length = 581

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -3

Query: 220 SYIHIYCASIHFIAYL*ALKRHLILDISKQNTTDVIALVT-RIYKFFPYRVSLNATK 53
           SYIH+    +  I +   L   L L ++    +D+IAL+T  IY F+ Y   L   K
Sbjct: 357 SYIHLMSPFVEHILWHVGLSACLGLTVALSLLSDIIALLTFHIYCFYVYGARLYCLK 413


>AB003723-1|BAA24948.1|  581|Homo sapiens GPI1 protein.
          Length = 581

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -3

Query: 220 SYIHIYCASIHFIAYL*ALKRHLILDISKQNTTDVIALVT-RIYKFFPYRVSLNATK 53
           SYIH+    +  I +   L   L L ++    +D+IAL+T  IY F+ Y   L   K
Sbjct: 357 SYIHLMSPFVEHILWHVGLSACLGLTVALSLLSDIIALLTFHIYCFYVYGARLYCLK 413


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,371,739
Number of Sequences: 237096
Number of extensions: 967416
Number of successful extensions: 1503
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1499
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)