Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_N18
         (566 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2140|AAF53151.1|   69|Drosophila melanogaster CG6770-PA...   122   4e-28
AY075227-1|AAL68094.1|  333|Drosophila melanogaster AT18116p pro...    30   2.5  
AE014297-181|AAF52069.1|  333|Drosophila melanogaster CG12590-PA...    30   2.5  

>AE014134-2140|AAF53151.1|   69|Drosophila melanogaster CG6770-PA
           protein.
          Length = 69

 Score =  122 bits (293), Expect = 4e-28
 Identities = 51/62 (82%), Positives = 56/62 (90%)
 Frame = +2

Query: 71  MSEAFFDEYDYYNFDHDKHIFTGHGGKQRTKREATEHTNHFDPSGHSRKIVTKLVNTENN 250
           MSEA FDEY++YNFDHDKHIF+GH GKQR KREA EHTNHFDPSGHSRKI+TKL+NT NN
Sbjct: 1   MSEAHFDEYEHYNFDHDKHIFSGHSGKQRNKREANEHTNHFDPSGHSRKILTKLMNTNNN 60

Query: 251 KK 256
            K
Sbjct: 61  NK 62


>AY075227-1|AAL68094.1|  333|Drosophila melanogaster AT18116p
           protein.
          Length = 333

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +2

Query: 446 HTNRIRCRTRQRLK*TRCYLAKSILVPTPFQCLISNFWAC 565
           H    +C     L+ + CYLA++   P PF C   +F  C
Sbjct: 165 HLQLAQCTALTDLRLSNCYLAETDSPPVPFSCQRLSFRRC 204


>AE014297-181|AAF52069.1|  333|Drosophila melanogaster CG12590-PA
           protein.
          Length = 333

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +2

Query: 446 HTNRIRCRTRQRLK*TRCYLAKSILVPTPFQCLISNFWAC 565
           H    +C     L+ + CYLA++   P PF C   +F  C
Sbjct: 165 HLQLAQCTALTDLRLSNCYLAETDSPPVPFSCQRLSFRRC 204


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,948,499
Number of Sequences: 53049
Number of extensions: 537912
Number of successful extensions: 1502
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1502
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)