Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_N16
(556 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 237 6e-63
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 236 7e-63
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 236 7e-63
04_01_0042 + 473912-474058,474208-474349,474442-476264 236 7e-63
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 182 2e-46
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 170 6e-43
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 165 3e-41
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 152 2e-37
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122... 29 1.9
06_03_0788 - 24603849-24603949,24604030-24604123,24604206-246044... 28 4.4
02_01_0647 + 4826411-4827343,4827437-4828060 28 4.4
01_01_0257 + 2097785-2097797,2098080-2098189,2098299-2098392,209... 28 4.4
10_07_0086 - 12755485-12756540,12756994-12757283,12757391-12757643 28 5.8
11_01_0439 + 3353516-3353962,3354403-3354483,3354675-3354947,335... 27 7.6
08_02_0987 + 23334208-23334297,23334422-23335360,23335449-23335730 27 7.6
05_01_0346 - 2710420-2710683,2711595-2711672,2711861-2711888,271... 27 7.6
03_02_0477 - 8770905-8770985,8771164-8771361,8771939-8772025,877... 27 7.6
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 237 bits (579), Expect = 6e-63
Identities = 115/144 (79%), Positives = 129/144 (89%)
Frame = +1
Query: 124 SGEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSG 303
+ E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+
Sbjct: 2 ASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 61
Query: 304 KELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQ 483
EL+I I+P+K TL+IID+GIGMTK+DLVNNLGTIA+SGTK FMEAL AGAD+SMIGQ
Sbjct: 62 PELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 121
Query: 484 FGVGFYSCYLVADRVTVHSKHNDD 555
FGVGFYS YLVA+RV V +KHNDD
Sbjct: 122 FGVGFYSAYLVAERVVVTTKHNDD 145
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 236 bits (578), Expect = 7e-63
Identities = 114/144 (79%), Positives = 129/144 (89%)
Frame = +1
Query: 124 SGEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSG 303
+ E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+
Sbjct: 2 ASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 61
Query: 304 KELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQ 483
EL+I I+P+K TL+IID+G+GMTK+DLVNNLGTIA+SGTK FMEAL AGAD+SMIGQ
Sbjct: 62 PELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 121
Query: 484 FGVGFYSCYLVADRVTVHSKHNDD 555
FGVGFYS YLVA+RV V +KHNDD
Sbjct: 122 FGVGFYSAYLVAERVVVTTKHNDD 145
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 236 bits (578), Expect = 7e-63
Identities = 114/144 (79%), Positives = 129/144 (89%)
Frame = +1
Query: 124 SGEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSG 303
+ E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+
Sbjct: 2 ASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQ 61
Query: 304 KELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQ 483
EL+I I+P+K TL+IID+G+GMTK+DLVNNLGTIA+SGTK FMEAL AGAD+SMIGQ
Sbjct: 62 PELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQ 121
Query: 484 FGVGFYSCYLVADRVTVHSKHNDD 555
FGVGFYS YLVA+RV V +KHNDD
Sbjct: 122 FGVGFYSAYLVAERVVVTTKHNDD 145
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 236 bits (578), Expect = 7e-63
Identities = 114/145 (78%), Positives = 130/145 (89%)
Frame = +1
Query: 121 QSGEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDS 300
Q E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ESLTD SKLD+
Sbjct: 8 QMAEKETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 67
Query: 301 GKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIG 480
EL+I+++P K TL+IID+G+GMTK+DLVNNLGTIA+SGTK FMEALQAGAD+SMIG
Sbjct: 68 QPELFIRLVPYKPSKTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALQAGADVSMIG 127
Query: 481 QFGVGFYSCYLVADRVTVHSKHNDD 555
QFGVGFYS YLVA++V V +KHNDD
Sbjct: 128 QFGVGFYSAYLVAEKVVVTTKHNDD 152
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 182 bits (442), Expect = 2e-46
Identities = 92/148 (62%), Positives = 112/148 (75%), Gaps = 2/148 (1%)
Frame = +1
Query: 118 TQSGEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLD 297
T E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+ +LTD L
Sbjct: 99 TLRSSAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKEVLG 158
Query: 298 SGK--ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADIS 471
G +L I+I +K + L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q G D++
Sbjct: 159 EGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTGGDLN 218
Query: 472 MIGQFGVGFYSCYLVADRVTVHSKHNDD 555
+IGQFGVGFYS YLVAD V V SKHNDD
Sbjct: 219 LIGQFGVGFYSVYLVADYVEVISKHNDD 246
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 170 bits (414), Expect = 6e-43
Identities = 83/158 (52%), Positives = 116/158 (73%), Gaps = 4/158 (2%)
Frame = +1
Query: 82 RRYIKMPEGMETTQSGEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKI 261
RRY ++++ + VE +QAE+ +LM LI+++ YSNKE+FLREL+SN+SDALDK+
Sbjct: 335 RRYESSAAAVDSSDTPPVEKHEYQAEVNRLMDLIVHSLYSNKEVFLRELVSNASDALDKL 394
Query: 262 RYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFM 441
RY S+TDP + G L I+I +K G +TI DTGIGMT+ +LV++LGTIA SGT F+
Sbjct: 395 RYLSVTDPDLIKDGAGLDIRIQTDKENGIITITDTGIGMTRQELVDSLGTIASSGTAKFL 454
Query: 442 EAL----QAGADISMIGQFGVGFYSCYLVADRVTVHSK 543
+AL +AG D ++IGQFGVGFYS +LV+D+V V +K
Sbjct: 455 KALKESQEAGVDSNLIGQFGVGFYSAFLVSDKVAVSTK 492
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 165 bits (400), Expect = 3e-41
Identities = 81/145 (55%), Positives = 112/145 (77%), Gaps = 4/145 (2%)
Frame = +1
Query: 121 QSGEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDS 300
++ E E F +QAE+++LM LI+++ YS+KE+FLREL+SN+SDALDK+R+ +TD S L
Sbjct: 337 ETAEEEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLGVTDSSLLAD 396
Query: 301 GKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQ----AGADI 468
G EL I+I P+ + GT+TI DTGIGMTK +L + LGTIA+SGT F++AL+ GAD
Sbjct: 397 GGELEIRIKPDPDAGTITITDTGIGMTKDELKDCLGTIAQSGTSKFLKALKENKDLGADN 456
Query: 469 SMIGQFGVGFYSCYLVADRVTVHSK 543
+IGQFGVGFYS +LVA++V V +K
Sbjct: 457 GLIGQFGVGFYSAFLVAEKVVVSTK 481
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 152 bits (369), Expect = 2e-37
Identities = 80/149 (53%), Positives = 109/149 (73%), Gaps = 13/149 (8%)
Frame = +1
Query: 136 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELY 315
E F +QAE+++L+ LI+++ YS+KE+FLREL+SN+SDALDK+R+ S+TD S L G EL
Sbjct: 83 EQFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTDSSVLSDGGELE 142
Query: 316 IKIIPNKNEGTLTII---------DTGIGMTKADLVNNLGTIAKSGTKAFMEALQ----A 456
I+I P+ GT+TI DTGIGMTK +L + LGTIA+SGT F++AL+
Sbjct: 143 IRIKPDPEAGTITITRSHCFASYSDTGIGMTKDELKDCLGTIAQSGTSKFLKALKENKDL 202
Query: 457 GADISMIGQFGVGFYSCYLVADRVTVHSK 543
GAD +IGQFGVGFYS +LVA++V V +K
Sbjct: 203 GADNGLIGQFGVGFYSAFLVAEKVVVSTK 231
>08_02_0846 -
21811156-21811833,21811960-21812055,21812157-21812267,
21812367-21812743,21814699-21814734,21815236-21815839
Length = 633
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = +1
Query: 358 IDTGIGMTKADLVNNLGT----IAKSGTKAFMEALQAG-ADISMIGQFGVG 495
++ GM+ A+L+ + I +SGTK E L+AG + ++G+ GVG
Sbjct: 100 VECAYGMSPAELLAKVAQFDALIVRSGTKVTREVLEAGRGRLRVVGRAGVG 150
>06_03_0788 -
24603849-24603949,24604030-24604123,24604206-24604413,
24604727-24604839,24605679-24605816,24605916-24605999,
24606517-24606675,24606754-24606837,24607505-24607840,
24607941-24608042,24608970-24609153,24609699-24610044,
24610444-24610591,24611053-24611203,24611786-24611867,
24612314-24612362
Length = 792
Score = 28.3 bits (60), Expect = 4.4
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +1
Query: 217 LRELISNSSDALDKIRYESLTDPSKLD-SGKELYIKIIPNKNEGTLTIIDTGIGMTKADL 393
+ ELI NS DA D S+L+ S K L+ K +K L++ID G GMT A++
Sbjct: 245 IAELIDNSRDA----------DASRLNISVKSLFSKKA-DKKIPVLSVIDDGHGMTCAEM 293
Query: 394 VNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGF 498
+ + K K + IG+FG+GF
Sbjct: 294 MRMISFGHKRPDKQRQD---------QIGRFGIGF 319
>02_01_0647 + 4826411-4827343,4827437-4828060
Length = 518
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +3
Query: 132 GGNLRLPSGNRSAHVIDHQHVLFK*GDLPSRA 227
GG RLP G + VI H H L GDLP RA
Sbjct: 35 GGEGRLPPGPWALPVIGHLHHLA--GDLPHRA 64
>01_01_0257 +
2097785-2097797,2098080-2098189,2098299-2098392,
2098786-2098974,2099061-2099120,2099231-2099391
Length = 208
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -2
Query: 207 LI*IERVDDQ*HELSDFRLEGE-GFHLARLCSLHTF 103
L+ I R+DD H D G GF +A LC LH F
Sbjct: 113 LVGISRIDDYRHHWEDVFAGGLLGFIMAMLCYLHFF 148
>10_07_0086 - 12755485-12756540,12756994-12757283,12757391-12757643
Length = 532
Score = 27.9 bits (59), Expect = 5.8
Identities = 21/90 (23%), Positives = 42/90 (46%)
Frame = -3
Query: 494 PTPN*PIILMSAPACRASMKALVPDFAMVPRLLTKSALVMPIPVSMIVSVPSFLLGIIFM 315
P+ P++ + P S A+ +P + S+ MP+P +S+P G++ M
Sbjct: 235 PSSATPLLPLQLPGLAGSSSAMSLPALQLPGMAGSSS-AMPLPP---LSLPGLAGGMMSM 290
Query: 314 YNSLPLSNFDGSVRDS*RILSNASDEFEIS 225
+ +++ + S +L + DEFEI+
Sbjct: 291 ADQANMASTSQASTPSSELLQDWYDEFEIT 320
>11_01_0439 +
3353516-3353962,3354403-3354483,3354675-3354947,
3355081-3355212,3355303-3355476,3355568-3355702,
3355746-3355797,3355954-3356093,3356574-3356705,
3356787-3356921,3356995-3357201,3357779-3357943
Length = 690
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 147 GEGFHLARLCSLHTFRHFDVSS*TFNSSPLKCGY 46
G+G+ L C+ TF +D +S +PL C Y
Sbjct: 443 GQGYGLTETCAGGTFSEYDDNSVGRVGAPLPCSY 476
>08_02_0987 + 23334208-23334297,23334422-23335360,23335449-23335730
Length = 436
Score = 27.5 bits (58), Expect = 7.6
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 114 DYTVWRGGNLRLPSG 158
DY+VW G+LR+P+G
Sbjct: 419 DYSVWEKGSLRVPAG 433
>05_01_0346 -
2710420-2710683,2711595-2711672,2711861-2711888,
2711973-2712022,2712112-2712165,2712240-2712281,
2712583-2712646,2713831-2713851,2714310-2714479,
2714746-2714910
Length = 311
Score = 27.5 bits (58), Expect = 7.6
Identities = 23/93 (24%), Positives = 42/93 (45%)
Frame = +1
Query: 70 VESLRRYIKMPEGMETTQSGEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA 249
VE+ Y K E ++ G+ ++ A IA + N S K+ L++ ++ A
Sbjct: 146 VETEGMYEKFNLAEERSEEGDAKSMHMAAVIADAIEPEANLI-SRKDAALQQRKASLRSA 204
Query: 250 LDKIRYESLTDPSKLDSGKELYIKIIPNKNEGT 348
+ S + + L S ++YI I+ KN+ T
Sbjct: 205 SRRSNSASCDEIAALRSEAKVYIVILLKKNKNT 237
>03_02_0477 -
8770905-8770985,8771164-8771361,8771939-8772025,
8772094-8772179,8772270-8772368,8772431-8772551,
8773251-8773331,8773643-8773723,8773972-8774088,
8774185-8774256,8774621-8775055
Length = 485
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -3
Query: 476 IILMSAPACRA-SMKALVPDFAMVPRLLTKSALVMPIPVSMIVS 348
++ +S AC+A + + VP + + L+ KSA +PIP +++
Sbjct: 153 MLAVSIAACKAGAAEKEVPLYKHIAELVGKSATTLPIPAITVIN 196
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,714,717
Number of Sequences: 37544
Number of extensions: 296531
Number of successful extensions: 659
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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