Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_N16
         (556 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   2.2  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   2.9  
Z69981-1|CAA93821.1|  327|Anopheles gambiae maltase precursor pr...    23   6.7  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   6.7  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 190 TFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELYIK 321
           TFY  KE+ + +L  N   AL+   +E       LDS KEL+++
Sbjct: 835 TFYGLKELEILQLDHNLLTALNGFEFEG------LDSLKELFLQ 872


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -2

Query: 159  FRLEGE-GFHLARLCSLHTFRHFDVSS*TFNSSP 61
            FR  GE  FHL+++ S H F   D+    F  SP
Sbjct: 930  FRRHGEVNFHLSQVLSGHGFFRDDLCRMGFTPSP 963


>Z69981-1|CAA93821.1|  327|Anopheles gambiae maltase precursor
           protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 259 IRYESLTDPSKLDSGKELY 315
           I +E   DP+  ++GK+LY
Sbjct: 131 ISWEDTVDPAACNAGKDLY 149


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -3

Query: 164 AISAWKAKVSTSPDCVVSIPSGILMYLLKLS 72
           A++ +K  + T+P+C  ++  G+    LKLS
Sbjct: 181 ALAFYKKALRTNPNCPAAVRLGMGHCFLKLS 211


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,851
Number of Sequences: 2352
Number of extensions: 10957
Number of successful extensions: 65
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)