Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_N16
         (556 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   1.6  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   2.7  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   2.7  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   8.4  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = -2

Query: 147 GEGFHLARLCSLHTFRHFDVSS*TFNSSPLKCGYNTCLKSPSIAAF 10
           G+GF  ++   +HT  H      T +      GYN  LK   +A +
Sbjct: 210 GKGFTCSKQLKVHTRTHTGEKPYTCDICGKSFGYNHVLKLHQVAHY 255


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +1

Query: 103 EGMETTQSGEVETFAFQAEIAQLMSLIINTFY--SNKEIFLRELISNSSDALDKIRYESL 276
           E   TT S  +   A   ++ + +   INTF   +NKE+   ++     + LDK+  E+L
Sbjct: 307 ETSSTTMSNALYELALNQDVQKKLREEINTFCPKNNKELKYDDI--KEMEYLDKVFKETL 364


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 78  FKKIHQNA*RYGDYTVWRGGNLRLPSGNR 164
           FKK  Q    Y +Y VWR  + R+ +G R
Sbjct: 132 FKKSVQRIKPYDEYYVWR--DARIVNGTR 158


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -1

Query: 463 RHLPAGPP 440
           R+LPAGPP
Sbjct: 11  RYLPAGPP 18


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,121
Number of Sequences: 438
Number of extensions: 3004
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)