Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_N15
(556 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10 pro... 220 3e-57
BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10 p... 220 3e-57
BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein. 220 3e-57
BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10 p... 220 3e-57
BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein. 220 3e-57
BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein. 220 3e-57
BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein. 220 3e-57
BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10 p... 220 3e-57
AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10 v... 218 1e-56
BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10 p... 200 2e-51
AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10 p... 139 5e-33
AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein. 130 4e-30
Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein. 125 1e-28
BC030568-1|AAH30568.1| 72|Homo sapiens LOC376693 protein protein. 95 2e-19
Z70761-1|CAA94807.1| 58|Homo sapiens ribosomal protein S10 pro... 48 3e-05
BC030553-1|AAH30553.1| 470|Homo sapiens sphingosine kinase 1 pr... 32 1.6
BC014439-1|AAH14439.1| 470|Homo sapiens sphingosine kinase 1 pr... 32 1.6
U07149-1|AAA16958.1| 346|Homo sapiens retinal degeneration slow... 31 2.7
M73531-1|AAA60260.1| 346|Homo sapiens retinal degeneration slow... 31 2.7
BC074720-1|AAH74720.1| 346|Homo sapiens peripherin 2 (retinal d... 31 2.7
AL049843-2|CAB75420.1| 346|Homo sapiens peripherin 2 (retinal d... 31 2.7
AK000857-1|BAA91400.1| 180|Homo sapiens protein ( Homo sapiens ... 31 2.7
BC089447-1|AAH89447.1| 981|Homo sapiens proline-rich transmembr... 31 3.6
BC040508-1|AAH40508.1| 597|Homo sapiens PRRT3 protein protein. 31 3.6
AK126796-1|BAC86698.1| 195|Homo sapiens protein ( Homo sapiens ... 31 3.6
AK090993-1|BAC03564.1| 667|Homo sapiens protein ( Homo sapiens ... 31 3.6
AF363689-1|AAK73515.1| 1608|Homo sapiens capicua protein protein. 31 3.6
AC006486-3|AAD11988.1| 1453|Homo sapiens BC85722_1 protein. 31 3.6
AB002304-1|BAA20765.1| 1451|Homo sapiens KIAA0306 protein. 31 3.6
>U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 220 bits (537), Expect = 3e-57
Identities = 115/166 (69%), Positives = 129/166 (77%), Gaps = 8/166 (4%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 207
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 208 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR---RGAVG-RPDAPAR 375
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R +G G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 376 TAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 507
DR YRR A P GA DKKA+ G GSA + +FRGGFGRGR P
Sbjct: 120 GEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGFGRGRGQP 163
>BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 220 bits (537), Expect = 3e-57
Identities = 115/166 (69%), Positives = 129/166 (77%), Gaps = 8/166 (4%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 207
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 208 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR---RGAVG-RPDAPAR 375
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R +G G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 376 TAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 507
DR YRR A P GA DKKA+ G GSA + +FRGGFGRGR P
Sbjct: 120 GEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGFGRGRGQP 163
>BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 220 bits (537), Expect = 3e-57
Identities = 115/166 (69%), Positives = 129/166 (77%), Gaps = 8/166 (4%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 207
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 208 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR---RGAVG-RPDAPAR 375
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R +G G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 376 TAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 507
DR YRR A P GA DKKA+ G GSA + +FRGGFGRGR P
Sbjct: 120 GEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGFGRGRGQP 163
>BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 220 bits (537), Expect = 3e-57
Identities = 115/166 (69%), Positives = 129/166 (77%), Gaps = 8/166 (4%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 207
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 208 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR---RGAVG-RPDAPAR 375
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R +G G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 376 TAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 507
DR YRR A P GA DKKA+ G GSA + +FRGGFGRGR P
Sbjct: 120 GEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGFGRGRGQP 163
>BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 220 bits (537), Expect = 3e-57
Identities = 115/166 (69%), Positives = 129/166 (77%), Gaps = 8/166 (4%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 207
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 208 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR---RGAVG-RPDAPAR 375
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R +G G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 376 TAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 507
DR YRR A P GA DKKA+ G GSA + +FRGGFGRGR P
Sbjct: 120 GEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGFGRGRGQP 163
>BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 220 bits (537), Expect = 3e-57
Identities = 115/166 (69%), Positives = 129/166 (77%), Gaps = 8/166 (4%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 207
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 208 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR---RGAVG-RPDAPAR 375
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R +G G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 376 TAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 507
DR YRR A P GA DKKA+ G GSA + +FRGGFGRGR P
Sbjct: 120 GEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGFGRGRGQP 163
>BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 220 bits (537), Expect = 3e-57
Identities = 115/166 (69%), Positives = 129/166 (77%), Gaps = 8/166 (4%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 207
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 208 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR---RGAVG-RPDAPAR 375
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R +G G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 376 TAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 507
DR YRR A P GA DKKA+ G GSA + +FRGGFGRGR P
Sbjct: 120 GEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGFGRGRGQP 163
>BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 220 bits (537), Expect = 3e-57
Identities = 115/166 (69%), Positives = 129/166 (77%), Gaps = 8/166 (4%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 207
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 208 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR---RGAVG-RPDAPAR 375
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R +G G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 376 TAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 507
DR YRR A P GA DKKA+ G GSA + +FRGGFGRGR P
Sbjct: 120 GEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGFGRGRGQP 163
>AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10
variant protein.
Length = 174
Score = 218 bits (532), Expect = 1e-56
Identities = 114/167 (68%), Positives = 129/167 (77%), Gaps = 8/167 (4%)
Frame = +1
Query: 31 KMLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVK 204
+MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVK
Sbjct: 9 QMLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVK 68
Query: 205 EQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR---RGAVG-RPDAPA 372
EQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPA L+RS R ET R +G G RP
Sbjct: 69 EQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPAILRRS-RPETGRPRPKGLEGERPARLT 127
Query: 373 RTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 507
R DR YRR A P GA DKKA+ G GSA + +FRGGFGRGR P
Sbjct: 128 RGEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGFGRGRGQP 172
>BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10
protein.
Length = 172
Score = 200 bits (489), Expect = 2e-51
Identities = 107/155 (69%), Positives = 120/155 (77%), Gaps = 7/155 (4%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 207
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 208 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR---RGAVG-RPDAPAR 375
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R +G G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 376 TAEDRSAYRR-APPAGAPHDKKADVGPGSADVEFR 477
DR YRR A P GA DKKA+ G GSA EF+
Sbjct: 120 GEADRDTYRRSAVPPGA--DKKAEAGAGSA-TEFQ 151
>AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10
protein.
Length = 78
Score = 139 bits (337), Expect = 5e-33
Identities = 62/78 (79%), Positives = 70/78 (89%), Gaps = 2/78 (2%)
Frame = +1
Query: 55 RVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKEQFAWRHF 228
R++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKEQFAWRHF
Sbjct: 1 RIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHF 60
Query: 229 YWYLTNEGIEYLRIFLHL 282
YWYLTNEGI+YLR +LHL
Sbjct: 61 YWYLTNEGIQYLRDYLHL 78
>AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein.
Length = 4684
Score = 130 bits (313), Expect = 4e-30
Identities = 67/127 (52%), Positives = 83/127 (65%), Gaps = 1/127 (0%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPK-HPDLEKIPNLQVIKAMQSLKSRGYVKEQ 210
MLMP+ +IYE LF+EGVMVAKKD HP + + NLQV++AM SL++RG V+E
Sbjct: 5 MLMPRDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRET 64
Query: 211 FAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGAVGRPDAPARTAEDR 390
FAW HFYWYLTNEGI +LR +LHLPPEIVPA+L+R R + A P A
Sbjct: 65 FAWCHFYWYLTNEGIAHLRQYLHLPPEIVPASLQRVRRPVAMVMPARRTPHVQAVQGPLG 124
Query: 391 SAYRRAP 411
S +R P
Sbjct: 125 SPPKRGP 131
>Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein.
Length = 4684
Score = 125 bits (301), Expect = 1e-28
Identities = 65/127 (51%), Positives = 82/127 (64%), Gaps = 1/127 (0%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPK-HPDLEKIPNLQVIKAMQSLKSRGYVKEQ 210
MLMP+ +IYE LF+EGVMVAKKD HP + + NLQV++AM SL++RG V+E
Sbjct: 5 MLMPRDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRET 64
Query: 211 FAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGAVGRPDAPARTAEDR 390
FAW HF+WYLTNEGI +LR +LHLPPEIV A+L+R R + A P A
Sbjct: 65 FAWCHFFWYLTNEGIAHLRQYLHLPPEIVAASLQRVRRPVAMVMPARRTPHVQAVQGPLG 124
Query: 391 SAYRRAP 411
S +R P
Sbjct: 125 SPPKRGP 131
>BC030568-1|AAH30568.1| 72|Homo sapiens LOC376693 protein protein.
Length = 72
Score = 94.7 bits (225), Expect = 2e-19
Identities = 45/60 (75%), Positives = 52/60 (86%), Gaps = 2/60 (3%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 207
MLMPK+N ++IYE LFKEGVMVAKKD H PKHP+L + PNL+V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNWIAIYELLFKEGVMVAKKDVHMPKHPELADKNAPNLRVMKAMQSLKSRGYVKE 60
>Z70761-1|CAA94807.1| 58|Homo sapiens ribosomal protein S10
protein.
Length = 58
Score = 47.6 bits (108), Expect = 3e-05
Identities = 28/53 (52%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +1
Query: 355 RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 507
RP R DR YRR A P GA DKKA+ G G + +FRGGFGRGR P
Sbjct: 7 RPARLTRGEADRDTYRRSAVPPGA--DKKAEAGLGQQPEFQFRGGFGRGRGQP 57
>BC030553-1|AAH30553.1| 470|Homo sapiens sphingosine kinase 1
protein.
Length = 470
Score = 31.9 bits (69), Expect = 1.6
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +1
Query: 358 PDAPARTAEDRSAYRRAPPAGA--PHDKKADVGPGSADVEFRGGFGRGRSAP 507
P PA D A P G PH + D GS D E + G SAP
Sbjct: 20 PRGPAAAGNDAGAPTATAPGGEGEPHSRPCDARLGSTDKELKAGAAATGSAP 71
>BC014439-1|AAH14439.1| 470|Homo sapiens sphingosine kinase 1
protein.
Length = 470
Score = 31.9 bits (69), Expect = 1.6
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +1
Query: 358 PDAPARTAEDRSAYRRAPPAGA--PHDKKADVGPGSADVEFRGGFGRGRSAP 507
P PA D A P G PH + D GS D E + G SAP
Sbjct: 20 PRGPAAAGNDAGAPTATAPGGEGEPHSRPCDARLGSTDKELKAGAAATGSAP 71
>U07149-1|AAA16958.1| 346|Homo sapiens retinal degeneration slow
protein protein.
Length = 346
Score = 31.1 bits (67), Expect = 2.7
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -2
Query: 174 HSFDHLEVRDLLEIWMFGCMVVFLSYHDSLLEEVLIDRNTVLFW 43
+S+DH + L +W+ GC LSY+ SL+ + + T+L W
Sbjct: 234 YSYDHQT--EELNLWVRGCRAALLSYYSSLMNSMGV--VTLLIW 273
>M73531-1|AAA60260.1| 346|Homo sapiens retinal degeneration slow
protein protein.
Length = 346
Score = 31.1 bits (67), Expect = 2.7
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -2
Query: 174 HSFDHLEVRDLLEIWMFGCMVVFLSYHDSLLEEVLIDRNTVLFW 43
+S+DH + L +W+ GC LSY+ SL+ + + T+L W
Sbjct: 234 YSYDHQT--EELNLWVRGCRAALLSYYSSLMNSMGV--VTLLIW 273
>BC074720-1|AAH74720.1| 346|Homo sapiens peripherin 2 (retinal
degeneration, slow) protein.
Length = 346
Score = 31.1 bits (67), Expect = 2.7
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -2
Query: 174 HSFDHLEVRDLLEIWMFGCMVVFLSYHDSLLEEVLIDRNTVLFW 43
+S+DH + L +W+ GC LSY+ SL+ + + T+L W
Sbjct: 234 YSYDHQT--EELNLWVRGCRAALLSYYSSLMNSMGV--VTLLIW 273
>AL049843-2|CAB75420.1| 346|Homo sapiens peripherin 2 (retinal
degeneration, slow) protein.
Length = 346
Score = 31.1 bits (67), Expect = 2.7
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -2
Query: 174 HSFDHLEVRDLLEIWMFGCMVVFLSYHDSLLEEVLIDRNTVLFW 43
+S+DH + L +W+ GC LSY+ SL+ + + T+L W
Sbjct: 234 YSYDHQT--EELNLWVRGCRAALLSYYSSLMNSMGV--VTLLIW 273
>AK000857-1|BAA91400.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ20850 fis, clone ADKA01542. ).
Length = 180
Score = 31.1 bits (67), Expect = 2.7
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 343 GAVGRPDAPARTAEDRSAYR-RAPPAGAPHDKKADVGPGSADVEFRGGFGRGR 498
G G R ++ +A R RA PAGA D GP + D + R G GR
Sbjct: 117 GGAGGGSRAGRASQAAAARRPRAQPAGAGADAAGHGGPAAVDGDARAGGAGGR 169
>BC089447-1|AAH89447.1| 981|Homo sapiens proline-rich transmembrane
protein 3 protein.
Length = 981
Score = 30.7 bits (66), Expect = 3.6
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 283 PPEIVPATLKRSVRTETVRRGAVGRPDAPARTAED-RSAYRRAPPAGA 423
PP P+T +R + T +R A+G+P P TA SA +PPA A
Sbjct: 407 PPVQAPSTSRRGLIRVTTQR-ALGQPPPPEPTASSMASAPASSPPANA 453
>BC040508-1|AAH40508.1| 597|Homo sapiens PRRT3 protein protein.
Length = 597
Score = 30.7 bits (66), Expect = 3.6
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 283 PPEIVPATLKRSVRTETVRRGAVGRPDAPARTAED-RSAYRRAPPAGA 423
PP P+T +R + T +R A+G+P P TA SA +PPA A
Sbjct: 23 PPVKAPSTSRRGLIRVTTQR-ALGQPPPPEPTASSMASAPASSPPANA 69
>AK126796-1|BAC86698.1| 195|Homo sapiens protein ( Homo sapiens
cDNA FLJ44846 fis, clone BRACE3051144. ).
Length = 195
Score = 30.7 bits (66), Expect = 3.6
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -3
Query: 125 LGAW*SFLATMTPSLKRYS 69
LG W FLAT+TPSLKR S
Sbjct: 177 LGRWTFFLATVTPSLKRSS 195
>AK090993-1|BAC03564.1| 667|Homo sapiens protein ( Homo sapiens
cDNA FLJ33674 fis, clone BRAWH2002047. ).
Length = 667
Score = 30.7 bits (66), Expect = 3.6
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 283 PPEIVPATLKRSVRTETVRRGAVGRPDAPARTAED-RSAYRRAPPAGA 423
PP P+T +R + T +R A+G+P P TA SA +PPA A
Sbjct: 407 PPVQAPSTSRRGLIRVTTQR-ALGQPPPPEPTASSMASAPASSPPANA 453
>AF363689-1|AAK73515.1| 1608|Homo sapiens capicua protein protein.
Length = 1608
Score = 30.7 bits (66), Expect = 3.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 506 GADRPLPKPPLNSTSAEPGPT 444
GA+ PLP PP T+A P PT
Sbjct: 1530 GAEAPLPVPPPTGTAAAPAPT 1550
>AC006486-3|AAD11988.1| 1453|Homo sapiens BC85722_1 protein.
Length = 1453
Score = 30.7 bits (66), Expect = 3.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 506 GADRPLPKPPLNSTSAEPGPT 444
GA+ PLP PP T+A P PT
Sbjct: 1375 GAEAPLPVPPPTGTAAAPAPT 1395
>AB002304-1|BAA20765.1| 1451|Homo sapiens KIAA0306 protein.
Length = 1451
Score = 30.7 bits (66), Expect = 3.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 506 GADRPLPKPPLNSTSAEPGPT 444
GA+ PLP PP T+A P PT
Sbjct: 1373 GAEAPLPVPPPTGTAAAPAPT 1393
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,393,463
Number of Sequences: 237096
Number of extensions: 1509470
Number of successful extensions: 4767
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4729
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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