Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_N11
         (584 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           25   1.8  
AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    23   5.5  
AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    23   5.5  
AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8...    23   7.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   9.6  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   9.6  

>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +3

Query: 6   RRRRVESHNSVWTGACRPNCSASCSADMLCC 98
           R+ RVE  NSV T     NC   CS  +LCC
Sbjct: 36  RQSRVEMCNSVRTALAASNC---CSI-VLCC 62


>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
           protein AgamOBP38 protein.
          Length = 336

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 64  QLGLHAPVHTLLCDSTRLLL 5
           +LGL+A    +LCD  RLL+
Sbjct: 196 RLGLYADSTGVLCDRVRLLM 215


>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 57  PNCSASCSADMLCCGREATLPSP 125
           PN S + S++  C G  ++ P P
Sbjct: 124 PNRSTTASSEQACSGSSSSSPEP 146


>AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8
           protein.
          Length = 700

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +2

Query: 203 ITKHFHNTLQHLKNRIECPDPDG-LGYD 283
           +T+ FH  LQH    +  P  DG L YD
Sbjct: 4   LTQKFHGLLQHPLEPLFLPKNDGTLFYD 31


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 231 SISRTVSNVPTPTVWATTDSYCPS 302
           SIS T S  P PTV    + + PS
Sbjct: 43  SISGTESTKPVPTVLGGPNLFAPS 66


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 121 EGRVASLPQQSISAEQLAEQL 59
           E  V   PQ  +S E+LAE+L
Sbjct: 398 ETEVGGDPQDPVSEEELAEEL 418


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,324
Number of Sequences: 2352
Number of extensions: 13322
Number of successful extensions: 30
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)