Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_N11
(584 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC093036-1|AAH93036.1| 796|Homo sapiens vacuolar protein sortin... 95 2e-19
BC010362-1|AAH10362.1| 796|Homo sapiens vacuolar protein sortin... 95 2e-19
BC002414-1|AAH02414.1| 796|Homo sapiens vacuolar protein sortin... 95 2e-19
AY007112-1|AAG01989.1| 190|Homo sapiens protein ( Homo sapiens ... 95 2e-19
AL512769-1|CAC21686.1| 497|Homo sapiens hypothetical protein pr... 95 2e-19
AK223218-1|BAD96938.1| 796|Homo sapiens vacuolar protein sortin... 95 2e-19
AK023650-1|BAB14626.1| 661|Homo sapiens protein ( Homo sapiens ... 95 2e-19
AK001614-1|BAA91790.1| 796|Homo sapiens protein ( Homo sapiens ... 95 2e-19
AF191298-1|AAF02778.2| 796|Homo sapiens vacuolar sorting protei... 95 2e-19
AF186382-1|AAG40619.1| 796|Homo sapiens vacuolar protein sortin... 95 2e-19
AF183418-1|AAG09687.1| 796|Homo sapiens maternal-embryonic 3 pr... 95 2e-19
AF175265-1|AAF89953.1| 796|Homo sapiens vacuolar sorting protei... 95 2e-19
AK000395-1|BAA91137.1| 190|Homo sapiens protein ( Homo sapiens ... 93 5e-19
BC015348-1|AAH15348.1| 84|Homo sapiens Unknown (protein for IM... 31 4.0
>BC093036-1|AAH93036.1| 796|Homo sapiens vacuolar protein sorting
35 homolog (S. cerevisiae) protein.
Length = 796
Score = 95.1 bits (226), Expect = 2e-19
Identities = 44/96 (45%), Positives = 62/96 (64%)
Frame = +2
Query: 8 EKAGRVAQQCMDGSVQAQXXXXXXXXXXXXXXXXNSTLTVNLIDAIIQKIREELANLDQS 187
+KA ++A QCMD S+Q Q N +T+ +++ +IQKIRE+L NL+ S
Sbjct: 701 KKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESS 760
Query: 188 EEVEQITKHFHNTLQHLKNRIECPDPDGLGYDGLVL 295
EE EQI KHFHNTL+HL+ R E P+ +G Y+GL+L
Sbjct: 761 EETEQINKHFHNTLEHLRLRRESPESEGPIYEGLIL 796
>BC010362-1|AAH10362.1| 796|Homo sapiens vacuolar protein sorting
35 homolog (S. cerevisiae) protein.
Length = 796
Score = 95.1 bits (226), Expect = 2e-19
Identities = 44/96 (45%), Positives = 62/96 (64%)
Frame = +2
Query: 8 EKAGRVAQQCMDGSVQAQXXXXXXXXXXXXXXXXNSTLTVNLIDAIIQKIREELANLDQS 187
+KA ++A QCMD S+Q Q N +T+ +++ +IQKIRE+L NL+ S
Sbjct: 701 KKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESS 760
Query: 188 EEVEQITKHFHNTLQHLKNRIECPDPDGLGYDGLVL 295
EE EQI KHFHNTL+HL+ R E P+ +G Y+GL+L
Sbjct: 761 EETEQINKHFHNTLEHLRLRRESPESEGPIYEGLIL 796
>BC002414-1|AAH02414.1| 796|Homo sapiens vacuolar protein sorting
35 homolog (S. cerevisiae) protein.
Length = 796
Score = 95.1 bits (226), Expect = 2e-19
Identities = 44/96 (45%), Positives = 62/96 (64%)
Frame = +2
Query: 8 EKAGRVAQQCMDGSVQAQXXXXXXXXXXXXXXXXNSTLTVNLIDAIIQKIREELANLDQS 187
+KA ++A QCMD S+Q Q N +T+ +++ +IQKIRE+L NL+ S
Sbjct: 701 KKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESS 760
Query: 188 EEVEQITKHFHNTLQHLKNRIECPDPDGLGYDGLVL 295
EE EQI KHFHNTL+HL+ R E P+ +G Y+GL+L
Sbjct: 761 EETEQINKHFHNTLEHLRLRRESPESEGPIYEGLIL 796
>AY007112-1|AAG01989.1| 190|Homo sapiens protein ( Homo sapiens
clone TCCCTA00141 mRNA sequence. ).
Length = 190
Score = 95.1 bits (226), Expect = 2e-19
Identities = 44/96 (45%), Positives = 62/96 (64%)
Frame = +2
Query: 8 EKAGRVAQQCMDGSVQAQXXXXXXXXXXXXXXXXNSTLTVNLIDAIIQKIREELANLDQS 187
+KA ++A QCMD S+Q Q N +T+ +++ +IQKIRE+L NL+ S
Sbjct: 95 KKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESS 154
Query: 188 EEVEQITKHFHNTLQHLKNRIECPDPDGLGYDGLVL 295
EE EQI KHFHNTL+HL+ R E P+ +G Y+GL+L
Sbjct: 155 EETEQINKHFHNTLEHLRLRRESPESEGPIYEGLIL 190
>AL512769-1|CAC21686.1| 497|Homo sapiens hypothetical protein
protein.
Length = 497
Score = 95.1 bits (226), Expect = 2e-19
Identities = 44/96 (45%), Positives = 62/96 (64%)
Frame = +2
Query: 8 EKAGRVAQQCMDGSVQAQXXXXXXXXXXXXXXXXNSTLTVNLIDAIIQKIREELANLDQS 187
+KA ++A QCMD S+Q Q N +T+ +++ +IQKIRE+L NL+ S
Sbjct: 402 KKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESS 461
Query: 188 EEVEQITKHFHNTLQHLKNRIECPDPDGLGYDGLVL 295
EE EQI KHFHNTL+HL+ R E P+ +G Y+GL+L
Sbjct: 462 EETEQINKHFHNTLEHLRLRRESPESEGPIYEGLIL 497
>AK223218-1|BAD96938.1| 796|Homo sapiens vacuolar protein sorting
35 variant protein.
Length = 796
Score = 95.1 bits (226), Expect = 2e-19
Identities = 44/96 (45%), Positives = 62/96 (64%)
Frame = +2
Query: 8 EKAGRVAQQCMDGSVQAQXXXXXXXXXXXXXXXXNSTLTVNLIDAIIQKIREELANLDQS 187
+KA ++A QCMD S+Q Q N +T+ +++ +IQKIRE+L NL+ S
Sbjct: 701 KKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESS 760
Query: 188 EEVEQITKHFHNTLQHLKNRIECPDPDGLGYDGLVL 295
EE EQI KHFHNTL+HL+ R E P+ +G Y+GL+L
Sbjct: 761 EETEQINKHFHNTLEHLRLRRESPESEGPIYEGLIL 796
>AK023650-1|BAB14626.1| 661|Homo sapiens protein ( Homo sapiens
cDNA FLJ13588 fis, clone PLACE1009298, weakly similar to
VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS35. ).
Length = 661
Score = 95.1 bits (226), Expect = 2e-19
Identities = 44/96 (45%), Positives = 62/96 (64%)
Frame = +2
Query: 8 EKAGRVAQQCMDGSVQAQXXXXXXXXXXXXXXXXNSTLTVNLIDAIIQKIREELANLDQS 187
+KA ++A QCMD S+Q Q N +T+ +++ +IQKIRE+L NL+ S
Sbjct: 566 KKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESS 625
Query: 188 EEVEQITKHFHNTLQHLKNRIECPDPDGLGYDGLVL 295
EE EQI KHFHNTL+HL+ R E P+ +G Y+GL+L
Sbjct: 626 EETEQINKHFHNTLEHLRLRRESPESEGPIYEGLIL 661
>AK001614-1|BAA91790.1| 796|Homo sapiens protein ( Homo sapiens
cDNA FLJ10752 fis, clone NT2RP3004480, weakly similar to
VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS35. ).
Length = 796
Score = 95.1 bits (226), Expect = 2e-19
Identities = 44/96 (45%), Positives = 62/96 (64%)
Frame = +2
Query: 8 EKAGRVAQQCMDGSVQAQXXXXXXXXXXXXXXXXNSTLTVNLIDAIIQKIREELANLDQS 187
+KA ++A QCMD S+Q Q N +T+ +++ +IQKIRE+L NL+ S
Sbjct: 701 KKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESS 760
Query: 188 EEVEQITKHFHNTLQHLKNRIECPDPDGLGYDGLVL 295
EE EQI KHFHNTL+HL+ R E P+ +G Y+GL+L
Sbjct: 761 EETEQINKHFHNTLEHLRLRRESPESEGPIYEGLIL 796
>AF191298-1|AAF02778.2| 796|Homo sapiens vacuolar sorting protein
35 protein.
Length = 796
Score = 95.1 bits (226), Expect = 2e-19
Identities = 44/96 (45%), Positives = 62/96 (64%)
Frame = +2
Query: 8 EKAGRVAQQCMDGSVQAQXXXXXXXXXXXXXXXXNSTLTVNLIDAIIQKIREELANLDQS 187
+KA ++A QCMD S+Q Q N +T+ +++ +IQKIRE+L NL+ S
Sbjct: 701 KKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESS 760
Query: 188 EEVEQITKHFHNTLQHLKNRIECPDPDGLGYDGLVL 295
EE EQI KHFHNTL+HL+ R E P+ +G Y+GL+L
Sbjct: 761 EETEQINKHFHNTLEHLRLRRESPESEGPIYEGLIL 796
>AF186382-1|AAG40619.1| 796|Homo sapiens vacuolar protein sorting
35 protein.
Length = 796
Score = 95.1 bits (226), Expect = 2e-19
Identities = 44/96 (45%), Positives = 62/96 (64%)
Frame = +2
Query: 8 EKAGRVAQQCMDGSVQAQXXXXXXXXXXXXXXXXNSTLTVNLIDAIIQKIREELANLDQS 187
+KA ++A QCMD S+Q Q N +T+ +++ +IQKIRE+L NL+ S
Sbjct: 701 KKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESS 760
Query: 188 EEVEQITKHFHNTLQHLKNRIECPDPDGLGYDGLVL 295
EE EQI KHFHNTL+HL+ R E P+ +G Y+GL+L
Sbjct: 761 EETEQINKHFHNTLEHLRLRRESPESEGPIYEGLIL 796
>AF183418-1|AAG09687.1| 796|Homo sapiens maternal-embryonic 3
protein.
Length = 796
Score = 95.1 bits (226), Expect = 2e-19
Identities = 44/96 (45%), Positives = 62/96 (64%)
Frame = +2
Query: 8 EKAGRVAQQCMDGSVQAQXXXXXXXXXXXXXXXXNSTLTVNLIDAIIQKIREELANLDQS 187
+KA ++A QCMD S+Q Q N +T+ +++ +IQKIRE+L NL+ S
Sbjct: 701 KKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESS 760
Query: 188 EEVEQITKHFHNTLQHLKNRIECPDPDGLGYDGLVL 295
EE EQI KHFHNTL+HL+ R E P+ +G Y+GL+L
Sbjct: 761 EETEQINKHFHNTLEHLRLRRESPESEGPIYEGLIL 796
>AF175265-1|AAF89953.1| 796|Homo sapiens vacuolar sorting protein
35 protein.
Length = 796
Score = 95.1 bits (226), Expect = 2e-19
Identities = 44/96 (45%), Positives = 62/96 (64%)
Frame = +2
Query: 8 EKAGRVAQQCMDGSVQAQXXXXXXXXXXXXXXXXNSTLTVNLIDAIIQKIREELANLDQS 187
+KA ++A QCMD S+Q Q N +T+ +++ +IQKIRE+L NL+ S
Sbjct: 701 KKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESS 760
Query: 188 EEVEQITKHFHNTLQHLKNRIECPDPDGLGYDGLVL 295
EE EQI KHFHNTL+HL+ R E P+ +G Y+GL+L
Sbjct: 761 EETEQINKHFHNTLEHLRLRRESPESEGPIYEGLIL 796
>AK000395-1|BAA91137.1| 190|Homo sapiens protein ( Homo sapiens
cDNA FLJ20388 fis, clone KAIA4517. ).
Length = 190
Score = 93.5 bits (222), Expect = 5e-19
Identities = 43/95 (45%), Positives = 61/95 (64%)
Frame = +2
Query: 8 EKAGRVAQQCMDGSVQAQXXXXXXXXXXXXXXXXNSTLTVNLIDAIIQKIREELANLDQS 187
+KA ++A QCMD S+Q Q N +T+ +++ +IQKIRE+L NL+ S
Sbjct: 95 KKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESS 154
Query: 188 EEVEQITKHFHNTLQHLKNRIECPDPDGLGYDGLV 292
EE EQI KHFHNTL+HL+ R E P+ +G Y+GL+
Sbjct: 155 EETEQINKHFHNTLEHLRLRRESPESEGPIYEGLI 189
>BC015348-1|AAH15348.1| 84|Homo sapiens Unknown (protein for
IMAGE:4415302) protein.
Length = 84
Score = 30.7 bits (66), Expect = 4.0
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 137 DAIIQKIREELANLDQS-EEVEQITKHFHNTLQHLKNR 247
D I ++EELAN + S EE+ Q+TKH ++ K +
Sbjct: 46 DCIHAVLKEELANAEYSPEEMPQLTKHLSENIKDKKKK 83
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,499,112
Number of Sequences: 237096
Number of extensions: 1714865
Number of successful extensions: 3966
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3952
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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